Jia De Laubenfels, 1930 was erected to accommodate Californian Jia jia, a microcionid sponge possessing a unique J-shaped microsclere, subsequently named croca (crook, shepherd's staff). In later revisions, the genus was assigned to the synonymy of Antho Gray, 1867 because of similarity in skeletal and spicular characters with that large worldwide genus. Over the years, two additional species, one Atlantic, one from the Tropical East Pacific, were found to possess the crocae, and here four additional species with these intriguing spicules are described from Indo-West and East Pacific localities. It appears that now seven species, all Antho-like, are known to possess crocae, together distributed over all three oceans. This leads us to hypothesize that crocae are a shared character of a monophyletic group of Antho species and accordingly we propose to revive Jia as a subgenus of Antho. The four new species are Antho (Jia) galapagosensis sp. nov., Antho (Jia) lithisticola sp. nov., Antho (Jia) wunschorum sp. nov. and Antho (Jia) ramosa sp. nov.

Haliclona is an unusually species-rich genus in Porifera, with more than 400 species described. In spite of many subgenera used in the taxonomic housekeeping of these sponges, over half of them remain unassigned to a subgenus, thus encouraging a wide range of redescriptions and taxonomic revisions of materials from all around the world. In this paper, we describe two new Haliclona spp. collected at Pernambuco, Alagoas and Bahia States (north-eastern Brazil, between 08°46′S and 13°56′S). Haliclona (Reniera) chlorilla sp. nov. is a dark green or black coloured, delicately-branched species; and Haliclona (Soestella) peixinhoae sp. nov., a beige-coloured, tubular species, where tubes frequently bear large thorns and possess a conspicuous sub-superficial meandering reticulation. These species highlight the importance of including ex-situ collections in compiling baseline data, as both were already present in scientific collections by the 1980s and 1990s.

Clathria is one of the most species-rich genera among Demospongiae, but only nine species have been recorded so far from Brazil. Here we describe a new species of Clathria (Microciona) collected by trawling in waters of Sergipe State (north-eastern Brazil). The new species is differentiated from other encrusting Clathria with a hymedesmioid skeleton by the possession of a combination of long thin subectosomal subtylostyles, two category sizes of acanthostyles, both erect and echinating the basal spongin skeleton, long slightly curved choanosomal principal subtylostyles with tuberculate spine heads and wing-shaped toxas as microscleres.

Sponge samples were taken by scuba diving from six sites around Sea Lion Island (Sea Lion, Sea Lion Easterly and Brandy Islands), three sites south-east of East Falkland (Motley Island, Green Island and Triste Island) and six sites around Beauchêne Island. Nine new species are described: Iophon roseum sp. nov., Clathria (Microciona) tenebrosa sp. nov., Clathria (Microciona) cheeki sp. nov., Hymedesmia (Hymedesmia) laptikhovskyi sp. nov., Hymedesmia (Hymedesmia) croftsae sp. nov., Myxilla (Ectyomyxilla) beauchênensis sp. nov., Tedania (Tedania) livida sp. nov., Amphilectus fimbriatus sp. nov. and Isodictya cutisanserina sp nov. Additional information is provided on several species recently described from the Falkland Islands and Amphimedon marsei is newly reported. The biogeography of the sponge fauna of the southern Falkland Islands is discussed.

The monospecific hexactinellid sponge genus Symplectella endemic to New Zealand waters was originally assigned to family Rossellidae within the order Lyssacinosida (subclass Hexasterophora), although affinities to family Euplectellidae were also noted. Seventy-eight years later, the genus was transferred to Euplectellidae (subfamily Corbitellinae) on rather subjective grounds. Here, I test these two competing taxonomic hypotheses with molecular phylogenetic methods and demonstrate that Symplectella rowi is indeed a rossellid, as was originally suggested. The genus is officially transferred back to Rossellidae (subfamily Rossellinae), which represents another small step towards a more natural classification system of glass sponges.

Until now only two species of Cladorhiza have been reported from the SW Atlantic, namely C. diminuta and C. inversa, despite a total of 39 species reported from various parts of the globe. Here we describe a new species, C. nicoleae sp. nov., dredged from 750 m depth on the continental slope off SE Brazil during the French RV ‘Marion Dufresne’ expedition in 1987. It is an erect, pedunculated and club-shaped sponge, 26 mm high and with 12 radially arranged whip-like projections (each up to 3 mm long). The new species differs from its closest relative, C. inversa (redescribed here), by its possession of sigmas and sigmancistras. The holotype of Cladorhiza inversa is also a pedunculated sponge, 1.9 cm tall, with a cup-shaped body with an apical spur-like continuation of the stem and a crown of 16 projections (up to 8 mm long) radiating from the rim of the body.

Sponge species are infamously difficult to identify for non-experts due to their high morphological plasticity and the paucity of informative morphological characters. The use of molecular techniques certainly helps with species identification, but unfortunately it requires prior reference sequences. Holotypes constitute the best reference material for species identification, however their usage in molecular systematics and taxonomy is scarce and frequently not even attempted, mostly due to their antiquity and preservation history. Here we provide case studies in which we demonstrate the importance of using holotype material to answer phylogenetic and taxonomic questions. We also demonstrate the possibility of sequencing DNA fragments out of century-old holotypes. Furthermore we propose the deposition of DNA sequences in conjunction with new species descriptions.

Bioeroding sponges of the Cliona viridis species complex play a large role in carbonate cycling and reef health. In the present study we provide the first record and a description of a Mediterranean lineage of C. viridis (Schmidt, 1862) in the south-western Atlantic. Specimens were collected in Maricás Archipelago, Rio de Janeiro State in September 2010 by scuba diving at 10–12 m depth and deposited in the Porifera collection of Museu Nacional, Universidade Federal do Rio de Janeiro. Morphologically, the specimens presently examined are very similar to those described in the beta and gamma growth form from the Mediterranean. The Brazilian and Mediterranean specimens share large and irregular papillae over 2 cm in diameter, megasclere tylostyles up to 500 µm long and microsclere spirasters with up to five twists and 34 µm long. A Maximum Likelihood analysis of 28S rDNA of C. viridis, C. aprica, C. jullieni, C. schmidti and C. varians was performed for a genetic identification of the Brazilian specimens. The Brazilian material is phylogenetically closer to the Mediterranean C. viridis than to the Caribbean and Indian Ocean members of this species complex included in the present analysis. Our results suggest that C. viridis is a cryptogenic species with a distribution extending from the Mediterranean to the eastern Atlantic and in the SE Brazilian coast or further.

The Indonesian archipelago is a ‘hotspot’ for invertebrate biodiversity (‘Coral Triangle’). In this area of ‘peak’ biodiversity, the origins of this high species diversity have often been debated. Xestospongia testudinaria is one of the sponge species that dominates coral reef sponge communities in this region. The role of the so-called ‘giant barrel sponge’ for the reef ecosystem has been studied repeatedly, as have its various bioactive compounds. However, the genetic variation of this iconic sponge in the region remains unknown. We investigate over 200 barrel sponge samples from Indonesia, and neighbouring as well as more distant localities (Saudi Arabia, Tanzania, Thailand, Taiwan, Java, Sulawesi and the Great Barrier Reef, Australia) using the mitochondrial cytochrome oxidase subunit 1. We compare our results with those from the studies on the congeneric barrel sponges Xestospongia muta from the Caribbean, and Xestospongia bergquistia from the Indo-Pacific, and observe a high degree of overlapping haplotypes between the three barrel sponge species, likely indicating the presence of ancestral polymorphisms. We discuss the implications of these findings to better interpret the phylogeography of barrel sponge taxa in the Indo-Pacific.

Suitable genetic markers for population studies in sponges are necessary to further our understanding of biodiversity and dispersal patterns, and contribute to conservation efforts. Due to the slow mitochondrial substitution rates in demosponges, nuclear introns are among the preferable markers for phylogeographic studies, but so far only the second intron of the ATP synthetase beta subunit-gene (ATPSβ) has been successfully established. In the present study, we analyse the intron of the Lysidyl Aminoacyl Transfer RNA Synthetase (LTRS), another potential marker to study demosponge intraspecific relationships, on samples of Neopetrosia chaliniformis from various locations in the Indo-Pacific and compare its variation with a mitochondrial marker (CO2). LTRS recovers several reciprocal monophyletic groups among the Indo-Pacific N. chaliniformis and provides a potential alternative to ATPSβ.

During the last decades, the Mediterranean shallow-water benthic communities have experienced significant changes in taxa composition and distribution. These variations were related to a complex set of anthropogenic stressors as well as to mass mortality events starting from 1999 and related to the current climatic changes. To evaluate the effect of these changes on long-living species with a limited larval dispersal capacity, a quantitative and qualitative monitoring of the shallow-water hard bottom community structure was performed over a pluri-decennial interval of time. The aim of this work was the comparison of the quali-quantitative occurrence and seasonal cycles of several benthic taxa living on a rocky cliff of the Portofino Promontory (eastern Liguria, Mediterranean Sea), from 15 to 20 m depth. The studied community, within a Lithophyllo–Halimedetum tunae association, was analysed by sets of photographs repeated, exactly in the same site, at 25 years of distance (1987/88 and 2012/13). The results suggest that the macroalgal coverage of the surveyed cliff suffered, during the monitored span of time, a significant depletion in quali-quantitative terms, while the overall sponge coverage remained almost unvaried. Nevertheless, a discrete analysis of the most common sponge species present in the study area showed significant variations, with some taxa now more abundant (Axinella spp. and Agelas oroides), some virtually stable (Cliona viridis and the complex of red encrusting sponges), and others drastically depleted (Chondrosia reniformis, Phorbas tenacior, Acanthella acuta, Ircinia spp., Dysidea avara and Petrosia ficiformis). Finally, some sponge species showed clear seasonal cycles indicating recruitment periods and post-recruit mortalities.

Experimental removals of the dominant canopy-forming kelp Ecklonia radiata were conducted at two sites on rocky walls in New Zealand and monitored for approximately 1.5 years. We hypothesized that the removal of the E. radiata canopy would affect the structure of subcanopy assemblages, such that there would be a reduction in sponge species richness and abundance. Furthermore, we investigated the biological and physical (predictor) variables that best explained variability in sponge assemblages after canopy removal. Canopy removal led to a community dominated by turf algae, which corresponded with a decrease in sponge abundance and richness. Our results suggest that the Ecklonia canopy may positively influence the presence of sponge species such as Crella incrustans; we propose that the canopy may allow its coexistence with turf algae underneath the canopy by altering the light regime and other environmental factors, which may be detrimental for some species. Our results highlight how any loss of canopy-forming species might have negative effects on sponge assemblages, which could affect the energy flow and the overall biodiversity found in these habitats.

Despite the current global decline in seagrass, sessile epifaunal invertebrates inhabiting seagrass ecosystems, particularly sponges and ascidians, have been poorly studied due to their taxonomic complexity. Understanding patterns of distribution of sessile epifaunal communities in seagrass meadows is an important precursor to determining the processes driving their distribution and species interactions. This study (1) identified the sponge and ascidian assemblage associated with Posidonia australis meadows and (2) determined distributional patterns of these invertebrates at a hierarchy of spatial scales in Jervis Bay, Australia. We used a fully nested design with transects distributed in the seagrass (10s m apart), two sites (100s m apart), and six locations (km apart). Within these transects, we recorded the abundance, volume, diversity and substratum used for attachment by sponges and ascidians. We encountered 20 sponge species and eight ascidian species; they were sporadically distributed in the seagrass meadows with high variability among the transects, sites and locations. A few sponge and ascidian species dominated the assemblage and were widespread across the largest spatial scale sampled. The remaining species were mostly rare and sparsely distributed. Sponges attached to a variety of substrata but most notably shells, P. australis and polychaete tubes. No obligate seagrass species were recorded although three species predominantly used P. australis as a substratum. These sponge species relying heavily on seagrass for their attachment are likely prone to disturbances impacting their host habitat. Examining the response of sessile epifauna to the degradation of their seagrass habitat remains a key challenge for the future.

In this study we revise the current knowledge on the biodiversity and distribution of the Class Homoscleromorpha in the Tropical Western Atlantic (TWA). Twenty-seven species are currently recognized in the TWA, belonging to the genera Oscarella (O. nathaliae), Plakortis (P. angulospiculatus, P. dariae, P. edwardsi, P. halichondrioides, P. insularis, P. microrhabdifera, P. myrae, P. petrupaulensis, P. potiguarensis, P. simplex, P. spinalis, P. zyggompha), Plakinastrella (P. globularis, P. microspiculifera, P. onkodes, P. stinapa), Plakina (P. coerulea, P. elisa, P. jamaicensis, P. monolopha, P. tetralopha, P. trilopha, P. versatilis), Corticium (C. diamantense, C. quadripartitum) and Tetralophophora (T. mesoamericana). Three of these ‘species’ are cosmopolitan and in fact represent complexes of cryptic species: Plakina monolopha, P. trilopha and Plakortis simplex. All other 24 species reported are TWA endemics. Only four species are found both in the Caribbean and in Brazil: Plakortis angulospiculatus, P. halichondrioides, Plakinastrella microspiculifera and P. onkodes, but these may also be species complexes. Seven species are Brazilian endemics: Plakina coerulea, Plakinastrella globularis, Plakortis insularis, P. microrhabdifera, P. petrupaulensis, P. potiguarensis and P. spinalis. Thirteen species are restricted to the Tropical North-western Atlantic: Corticium diamantense, C. quadripartitum, Oscarella nathaliae, Plakina elisa, P. jamaicensis, P. tetralopha, P. versatilis, Plakortis dariae, P. edwardsi, P. myrae, P. zyggompha, Plakinastrella stinapa and Tetralophophora mesoamericana. The Greater Antilles is the richest ecoregion, with 12 species reported. Only the Guianan ecoregion has no records of Homoscleromorpha. Several undescribed species of Oscarella and Plakina are also known from the TWA. We estimate that the biodiversity of Homoscleromorpha in the TWA is at least twice as high than currently known.

The main objectives of this study are the establishment of a detailed description of five semi-submerged and shallow-water marine caves from the Tarkhankut Peninsula (Crimea), their biological characteristics with particular attention to species composition, and the distribution of sponge assemblages in these caves. Three semi-submerged and two submerged caves with lengths of 9–131 m and volumes of 61–3060 m3 have been investigated. All of them are karst-abrasive or karst in origin. In the investigated caves, we inventoried seven sponge species. All were recorded species of Porifera belong to the class Demospongiae and have previously been recorded also in adjacent open sea waters. These species are tolerant to different hydrological conditions, mostly temperature and salinity. Some of them have wide geographic distribution. The species composition of sponges from the shallow water caves of Crimea is quite different from the sponge composition in Mediterranean caves. This could be due to the geographic isolation of the Black Sea and the differences in the hydro-chemical parameters of the milieu (water salinity in Tarkhankut is 18–21‰).

Although sponges constitute the dominant animal group in marine caves globally, few studies have investigated quantitatively their diversity patterns in this habitat. Regarding Mediterranean marine caves, data describing the structure and diversity gradients of sponge assemblages are available for the north-western basin, while information for the eastern Mediterranean is almost inexistent. In this study, the sponge assemblages in two Aegean marine caves (eastern Mediterranean Sea) with different topography were examined using a non-destructive method. In each cave, three quadrats (25 × 25 cm) were photographed at 5 m intervals, along three transects: one along the ceiling and two along the opposite walls. Per cent coverage for each sponge species was calculated using advanced image processing software. Our analyses revealed a rich sponge assemblage, which consisted of 50 species assigned to eight growth forms. Resemblance analysis for the surveyed caves revealed two major groups of samples corresponding to the shadowy outer and the darker internal cave sectors. However, differences in species composition as well as divergent spatial patterns of species richness, Shannon–Wiener diversity and morphological diversity were found not only between the caves but also between different transects within each cave. Sponge morphological diversity presented significant positive correlation with species richness and Shannon–Wiener diversity in both caves, suggesting that it could possibly be used as a surrogate measure for describing sponge diversity gradients in Mediterranean caves. Cave topography was found to have a significant effect on the observed diversity patterns and assemblage structure, highlighting the high level of individuality in these unique habitats.

Sponge-related research in Taiwan has primarily focused on natural product exploration. This research has, however, been hampered by a lack of fundamental work on sponge taxonomy and ecology. In the present study, subtidal sponges were photo-recorded in situ and collected by scuba diving at a depth range of 2–20 m from 2009 to 2012 in 16 different sites surrounding the Penghu Archipelago, Taiwan. Sponge samples were identified to the lowest taxonomic level based on skeletal morphology and spicules. A total of 53 species belonging to 24 families and 10 orders were identified in this study. The number of sponge species per site ranged from 0 to 24. The most widely distributed sponge species was Callyspongia (Euplacella) cf. communis (Carter, 1881) followed by Haliclona (Gellius) cymaeformis (Esper, 1794), and Aaptos suberitoides (Brøndsted, 1934). At one location, Chipeiyu, no sponges were observed. Non-metric multidimensional scaling (NMDS) ordination revealed relatively low similarity among most sampling sites. Large- and small-scale hydrological and habitat features are probably responsible for compositional variation of sponge assemblages among groups of sampling sites. Our richness analyses suggest that many more sponge species remain to be discovered in the Penghu Archipelago.

Glass sponge reefs on the continental shelf of western Canada and south-east Alaska are considered stable deep-sea habitats that do not change significantly over time. Research cruises using a remotely operated vehicle equipped with accurate GPS positioning have allowed us to observe the same sponges at two reefs in the Strait of Georgia, British Columbia to document recruitment, growth and response to damage over time. Spermatocysts and putative embryos found in winter suggest annual, asynchronous reproduction. Juvenile sponges (2–10 cm in osculum diameter) in densities up to 1 m−2 were more concentrated near live sponges and sponge skeletons than away (Spearman rank correlations, P < 0.0001 for live cover and for skeletons), suggesting that recruitment occurs in particular regions using sponge skeletons as substrate. Most sponges showed no change in shape or size over 2–3 years, but some had died while others showed growth of 1–9 cm year−1. Deposition rates of reef-cementing sediments were 97 mm year−1 at Galiano Reef and 137 mm year−1 at Fraser Reef, but sediments eroded so that there was no net gain or loss over time. Sponges recovered within 1 year from small-scale damage that mimicked bites by fish or nudibranchs; however sponges did not recover from crushing of a large area (1.5 × 2 m2) even 3 years later. These observations and experiments show that while recruitment and growth of sponge reefs is more dynamic than previously thought, the reefs are not resilient in the face of larger-scale disturbances such as might be inflicted by trawling.

Three species of lithistid sponges, Neoaulaxinia zingiberadix, Isabella mirabilis and Neoschrammeniella fulvodesmus were collected from deep seamounts off New Caledonia to address questions about their population structure, gene flow and the relative contribution of sexual and asexual reproductive strategies to their populations. The sponges were tested by sequencing the ITS (internal transcribed spacer) and CO1 regions of their genomes. These rare and presumably ancient sponges have a distribution restricted to seamounts in the south-western Pacific. Deep seamounts represent geographically separated islands. Although the sponges could be expected to have sexual reproduction restricted to near neighbours due to low sexual dispersal opportunities via larvae, this study found surprisingly high levels of gene flow between the seamounts. Amongst the specimens of N. zingiberadix taken from two seamounts there was no population structure; CO1 resulted in identical genotypes. For the population structure within N. fulvodesmus, as revealed by ITS, most of the variation was within each individual from the six seamounts on which it occurred and CO1 revealed no difference between individuals or seamounts. The third species I. mirabilis showed four genotypes based on CO1, which were distributed across all the seamounts. Indirect measures of different species showed a range of reproductive strategies from asexual to sexual, but with much higher connection between seamounts than previously thought. Individual seamounts did not show a separate population structure as one might expect from ‘islands’. The conclusion must be that these sponges have mechanisms to attain greater dispersal than previously thought.