There is little understanding of how large mammalian herbivores in Asia partition habitat and forage resources, and vary their diet and habitat selection seasonally in order to coexist. We studied an assemblage of four large herbivores, chital (Axis axis), sambar (Cervus unicolor), gaur (Bos gaurus) and Asian elephant (Elephas maximus), in the seasonal tropical forests of Bandipur and Mudumalai, South India, and tested predictions regarding the species’ seasonal diet browse : graze ratios, habitat selection and habitat-niche preference and overlap. Field data collected for the study included the seasonal variation in grass quality, the seasonal variation in δ13C in the species’ faeces and the seasonal variation in the species’ habitat selection and overlap using a grid-based survey. Results of the δ13C analyses showed that the chital was more of a grazer in the wet season (−17.9‰ to −21.6‰), but that it increased the proportion of browse in its diet in the dry season (−25.6‰ to −27.7‰); the gaur was a grazer for most of the year (−15.3‰ to −18.6‰); the sambar preferred to browse throughout the year (−21.1‰ to −30.4‰); and that the elephant was a mixed feeder (−14.2‰ to −21.4‰). Elephant habitat-niche breadth was high (0.53 in wet and 0.54 in dry) and overlapped equally with that of the other species in both seasons (0.39–0.94). The gaur had the most restricted habitat-niche breadth in both seasons (0.25 in wet and 0.28 in dry), and it switched from the moist deciduous habitat in the dry season to the dry deciduous habitat in the wet season. These results offer the first insights into the seasonal variation in browse : graze diet ratios and the habitat-niche overlap amongst the common largest-bodied mammalian herbivore species found in South India.

Species co-occurrence is an important ecological research area. Mark-and-recapture studies of mammals allow identification of coexisting species, a necessary step in determining mechanisms enabling habitat sharing. Using data from five 1-ha grids in January 2004 in tropical dry deciduous forest of coastal Colima, Mexico, we detected significantly more interspecific overlap than expected between seven species pairs. Oryzomys couesi shared more stations than expected with Sigmodon mascotensis, Baiomys musculus and Peromyscus perfulvus. Baiomys musculus was associated positively with S. mascotensis and Reithrodontomys fulvescens. Heteromys pictus shared fewer stations than expected with O. couesi and S. mascotensis. For species collectively, there was non-random community structuring, with two grids displaying more species aggregation than expected. While two grids had non-random co-occurrence patterns, three grids did not differ from random, which differs from that reported for mammalian taxa on average. Other small-mammal studies have documented species segregation, while this study detected more positive than negative associations. Similarities in preference and habitat use (or diet) are likely explanations for interspecific overlap patterns at stations and co-occurrence patterns among grids. Simultaneously evaluating associations of species pairs and all species on a grid collectively is novel methodology as applied to mammals, adding to understanding of species co-occurrence.

Dung beetles (Scarabaeidae subfamily Scarabaeinae) are ubiquitous and play an important role in the removal of animal dung and the dispersal of seeds embedded therein. They exhibit a range of dung-acquisition and burying behaviours, from burying dung directly beneath the dung deposit to rolling dung balls up to several metres. Dung beetles act as important agents for secondary seed dispersal and seed survival: the burial of seeds is said to be of advantage against predators and desiccation (Andresen & Feer 2005, Culot et al. 2009, Feer 1999). In addition, burial of seeds by dung beetles is considered beneficial as seeds are not only deposited within the range of depths that are favourable for seedling establishment but also among organic fertilizer that is said to increase seedling growth rates (Andresen 1999, 2002; Estrada & Coates-Estrada 1991, Shepherd & Chapman 1998).

Low phosphorus (P) supply frequently has been shown to limit the abundance and activity of nitrogen (N)-fixing organisms, potentially constraining N inputs to ecosystems. Previous research in a montane Hawaiian forest has shown that ground-level P-fertilization led to significant increases in the population size of epiphytic N-fixing lichens (cyanolichens), as well as a shift in community composition from crustose to leafy species. In this study, we ask whether these changes in the cyanolichen community have resulted in increased N inputs to the forest, and also whether the very high levels of P in the canopy of P-fertilized forest stimulate individual lichen fixation rates over those of lichens from a nearby unfertilized reference forest. We used acetylene reduction (AR) assays to measure the fixation rates of 14 cyanolichen species from P-fertilized forest, and calibrated these rates by measuring 15N2 fixation incorporation in four species. We found that the ratio of acetylene reduced to N fixed ranged from 2.4 ± 0.4 in Pseudocyphellaria crocata to 9.3 ± 2.4 in Leptogium denticulatum. Nitrogen fixation rates in the P-fertilized forest ranged from 0.64 ± 0.05 nmol N cm−2 h−1 in Nephroma helveticum to 3.97 ± 1.48 nmol N cm−2 h−1 in Parmeliella nigrocincta. Fixation rates did not vary greatly among species from P-fertilized forest. We compared these P-fertilized rates to those of 10 species from the reference forest, and found that mass-based fixation rates of P-fertilized lichens were not greater than those of lichens from the unfertilized forest. Using the measured AR rates, we estimate that the P additions increase cyanolichen N inputs to the forest 30-fold, from ~0.3 kg N ha−1 y−1 to ~9 kg N ha−1 y−1. These results suggest that P additions to this ecosystem increase N inputs primarily by increasing the abundance of cyanolichens, and that shifts in cyanolichen community composition and changes in individual fixation rate were of lesser importance in determining ecosystem N inputs.

In this study, we investigated whether landscape-scale variation of soil P accounts for 13C and 15N composition of detrital invertebrates in a lowland tropical rain forest in Costa Rica. The top 10-cm soil, leaf-litter samples and plant foliage were collected among 18 plots representing a three-fold soil P gradient during 2007–2009. Body tissue of litter invertebrates (extracted from leaf-litter samples) along with soil, leaf litter and green foliage were analysed for total C, total N, δ13C and δ15N values. Differences in δ13C and δ15N signatures across plots and relative trophic distances of detrital food webs (Δ δ15N), and their variation with soil P gradient were evaluated. We found soil P gradient had a significantly positive correlation with δ15N of Asterogyne martiana foliage, leaf litter, collembolans and oribatid mites. The δ15N of the collembolans and pseudoscorpions positively correlated to leaf-litter δ15N. Δ δ15N between the trophic levels remained consistent across the soil P gradient. Higher δ15N in the collembolans and oribatid mites might be derived from their consumption on 15N-enriched decayed debris or fungal hyphae growing on it. It suggests that fine-scale soil P variation can affect trophic dynamics of detrital arthropods via regulation of microbial community and nutrient dynamics.

Compounds of the 20 elements needed by living organisms are relatively soluble in water and therefore vulnerable to being leached and lost from terrestrial ecosystems during mineralization. Intact systems have thus acquired retention mechanisms that sequester nutrients and minimize losses. Such mechanisms should be particularly important where rainfall is very high but direct evidence of retention mechanisms in tropical forests is scarce (Snaddon et al. 2012, Turner et al. 2007).

Climbing plants provide efficient pathways for ants to access patchy arboreal resources. However, plant stems vary greatly in physical characteristics that are likely to influence ant locomotion. We collected, measured and identified ants foraging on 671 stems of climbing plants at the La Selva Biological Station, Costa Rica. We applied tuna baits to 70% of the observed stems to attract ants to a broad range of stem sizes. We used these data to examine relationships between relative stem roughness, growth form (herbaceous or woody), stem diameter and the body length of foraging ants representing 58 species. The size of the largest ants found on stems generally increased with stem size up to 3.2 mm diameter, whereas the size of the smallest ants present on stems did not vary with stem diameter. The largest ants in the forest (Paraponera clavata) used small stems (<2.7 mm diameter) only when attracted by baits. Average (± SE) ant body length was larger on woody (5.2 ± 0.32 mm) vs. herbaceous (3.3 ± 0.53 mm) stems, but did not differ between rough and smooth stems within these categories. Ant body-size distribution tended toward unimodality on smooth stems. We conclude that small stem diameter acts as a habitat filter based on ant body size, but only for the largest ants in the forest. The filter effect is reduced when ants are attracted to an artificially high quality resource.

Many tropical tree species have buttresses at the standard breast height (1.3 m above ground) of diameter measurement, with a presumable role in improving nutrient acquisition or tree anchorage in the ground (Newbery et al. 2009, Richter 1984). Measuring the diameter using standard dendrometrical tools such as callipers or graduated tapes, which require that the cross-section of the trunk has a convex shape, is then impossible (Nogueira et al. 2006). The recommended method in this case is to measure the diameter above the buttress (DAB), thus possibly leading to biased estimates of the basal area (West 2009), of tree above-ground biomass (Dean & Roxburgh 2006, Dean et al. 2003) and of tree growth (Metcalf et al. 2009). As an alternative, one can measure the basal area at breast height of buttressed trees, using a method that can deal with the irregular non-convex shape of the cross-section of the stem such as the Picus calliper, photogrammetry or 3D laser scanning (Badia et al. 2003, Dean 2003, Newbery et al. 2009).

Theory predicts that not all plant species will be equally affected by disruption to their pollinator mutualisms because traits such as breeding system and mutualism strength can affect their response. We investigated these traits in three species of Afromontane mistletoe Globimetula braunii, Agelanthus brunneus and A. djurensis in Ngel Nyaki Forest Reserve, Nigeria, to test whether the traits were reliable indicators of relative reproductive success and could be used to predict relative vulnerability to pollinator loss. For each mistletoe species, insect and bird visitors were identified during a 160–240-min observation period of 4–10 plants and their roles in flower opening and fruit set were investigated using exclusion experiments applied to 250–500 flowers. We found that all three mistletoes are self-compatible but not capable of autonomous self-fertilization. The pollinator assemblage comprised four species of sunbird (Cyanomitris spp., Cinnyris spp.) and a small social wasp (Vespinae). None of the mistletoes requires birds for flower opening: G. braunii flowers self-opened in the absence of pollinators, whereas insects opened both Agelanthus spp. Irrespective of flower opening, each mistletoe species requires sunbirds for effective pollination and fruit set. Only G. braunii demonstrated pollen limitation (pollen limitation index = 0.504) which may be an early indication of mutualism breakdown. We suggest that mistletoes be considered as indicators of habitat condition and functioning within Afromontane forest ecosystems.

Coexistence of closely related species is a central issue in community ecology, and those species are expected to present niche differentiation, particularly when resources become scarce (García & Arroyo 2005). Hence, resource abundance and diet differences might be playing a key role in determining species coexistence (Chapman & Rosenberg 1991, Stevenson et al. 2000). Trophic niche differentiation in frugivorous birds could be driven by fruit selection, morphology, behaviour (Moermond & Denslow 1983, 1985) and the spatiotemporal resource dynamics (Blake & Loiselle 1991, Saracco et al. 2005, Solórzano et al. 2000).

The effectiveness of seed dispersal by vertebrates has been analysed by examining both quantitative and qualitative components (Jordano & Schupp 2000, Schupp et al. 2010). While the quantitative component is relatively easily assessed in the field (e.g. visitation rate, number of fruits eaten per visit), the qualitative component (e.g. fate of dispersed seeds, seed treatment in the digestive system of the disperser) is rarely studied under natural conditions, because it is difficult to measure the effects on seeds once ingested by the dispersers (Cortes et al. 2009).

The distribution of mangrove forests is limited to the coastal zones of tropical and subtropical regions, and their total area is far smaller than that of upland forests (Spalding et al. 2010). Mangrove forests often show unique patterns of biomass allocation and carbon dynamics because they are periodically submerged by tides (Komiyama et al. 2008). Therefore, the contribution of mangrove forests to the global carbon fixation process should be carefully evaluated even though their distribution area is limited.

We identified and quantified regional and local environmental factors and spatial variation associated with tree-species composition across a 2000-m altitudinal gradient of Andean forest in north-western Argentina. A network of 47 1-ha plots was established along the altitudinal gradient within an area of about 25 000 km2; all trees ≥ 10 cm dbh were identified and measured. Constrained ordinations and variance-partitioning analyses were performed to investigate the determinants of tree-species distribution at the regional scale, across and within forest types (i.e. dry and cloud forests). We marked and measured a total of 22 240 trees belonging to 160 species. Significant environmental factors and spatial location combined accounted for 35% of total variation explained. A high proportion of variation was explained by climatic factors that were spatially structured; after removing the spatial effect, climate explained more variation in species composition across the complete gradient than did local factors. Relative importance of regional and local factors varied with geographic extent. Local factors explained more variation in tree-species composition at the within-forest scale than at the scale of the complete gradient. Our findings support the conceptual model of multi-scale controls on vegetation distribution, where local community composition and abundance result from processes at both regional and local scales.

The present study examined the effect of a catastrophic cyclone (Aila) on ichthyofaunal assemblages in a tidal river of the Sundarban Delta. Sampling in six stations with a gill-net of 20-m length and 1-cm mesh size resulted in the collection of 63 species in a pre-Aila survey. Among them, 16 species were not available in the year after the cyclone. However, 12 new species were added to the assemblages in the post-Aila year during which 59 species were recorded. Analysis of Similarity (ANOSIM) confirmed significant changes in fish assemblages after the cyclone with a corresponding reduction of the species diversity and variation in the seasonal pattern of abundance. Hydrological parameters also differed with a significant surge in nutrient concentrations. Tolerance to low dissolved oxygen seemed to be a determinant factor as evident from the higher abundance of certain fishes viz. Harpadon nehereus, Liza parsia, Pampus argentius, Tenualosa ilisha and Toxotes chatareus during post-Aila year. Despite the recovery of the ichthyofaunal assemblages at the later stage of the study, a strong seasonal variation was persistent. The study therefore suggests that environmental variation in terms of increasing temperature and salinity elicit greater response in an estuarine community than temporary natural disturbances even as severe as cyclones.

Fire is an important land-management tool in tropical forest landscapes. However, these fires sometimes escape into surrounding forests (Uhl & Buschbacker 1985), and are one of the most severe disturbances threatening tropical forest biodiversity (Barlow et al 2006). These forest fires have become more frequent over the last decades due to the combined effect of selective logging, fragmentation and abnormal droughts that increase the flammability of forests, and agriculture expansion that brings the ignition sources (Aragão & Shimabukuro 2010).

Ecological and morphological traits of fruiting trees, such as spatial distribution (Levey et al. 1984), crop size (Howe & vande Kerckhove 1981, Korine et al. 2000, Leighton 1993, Murray 1987), local availability of fruit (Sargent 1990), seed size or pulp/seed mass ratio (Julliot 1996a, Leighton 1993, McConkey et al. 2002, Russo 2003, Stevenson et al. 2005) and nutritional value and concentration of secondary compounds (Leighton 1993, Milton 1980, Sallabanks 1993), influence fruit preference in animals. In general, frugivores maximize energy intake by consuming ripe fruit with smaller seeds, higher pulp/seed ratio, bigger crop size, more nutritional fruits or fruits with fewer secondary compounds (Howe & vande Kerckhove 1981, Julliot 1996a, Korine et al. 2000, Leighton 1993, Milton 1980, Murray 1987, Russo 2003, Stevenson et al. 2005).

Mangroves generally grow in nutrient-poor environments and maintain high levels of productivity through unique adaptations for nutrient conservation (Reef et al. 2010). One such adaptation in mangroves is highly efficient resorption of limiting nutrients from senescing leaves prior to abscission (Feller et al. 2003). Thus processes that lead to loss of foliage prior to senescence and nutrient resorption (e.g. storms and herbivory) can be detrimental to tree growth and productivity (Bryant et al. 1983, May & Killingbeck 1992). Furthermore, decomposition of fallen leaves by soil microbial communities (Alongi 1994, Holguin et al. 2001) and crabs (Nagelkerken et al. 2008) is another important process contributing to the recycling of nutrients that are in short supply. Therefore, processes that lead to a substantial reduction in litterfall can have a strong negative effect on nutrient cycling and forest productivity. Mangroves have long been recognized as an important source of organic carbon (both particulate and dissolved) for the surrounding tropical coastal ecosystems (Bouillon et al. 2008, Kristensen et al. 2008). Thus, processes affecting litterfall in mangroves can affect the surrounding marine food webs.

Studies of recently isolated populations are useful because observed differences can often be attributed to current environmental variation. Two populations of the lizard Anolis lemurinus have been isolated on the islands of Cayo Menor and Cayo Mayor in the Cayos Cochinos Archipelago of Honduras for less than 15 000 y. We measured 12 morphometric and 10 habitat-use variables on 220 lizards across these islands in 2 y, 2008 and 2009. The goals of our study were (1) to explore patterns of sexual dimorphism, and (2) to test the hypothesis that differences in environment among islands may have driven divergence in morphology and habitat use despite genetic homogeneity among populations. Although we found no differences among sexes in habitat use, males had narrower pelvic girdles and longer toe pads on both islands. Between islands, males differed in morphology, but neither males nor females differed in habitat use. Our data suggest that either recent selection has operated differentially on males despite low genetic differentiation, or that they display phenotypic plasticity in response to environmental variation. We suggest that patterns may be driven by variation in intrapopulation density or differences in predator diversity among islands.

Phytotelmata (plant-held waters) are useful ecological models for studying predator–prey interactions. However, the ability of terrestrial predators to influence organism abundance within phytotelmata remains poorly studied. We investigated the predation of two pitcher-dwelling spiders, the red crab spider Misumenops nepenthicola and the yellow crab spider Thomisus nepenthiphilus (Araneae: Thomisidae) on dipteran larval abundance by manipulating their presence in the pitcher Nepenthes gracilis. Lower abundance in the larvae of the mosquito Tripteriodes spp. and increased spider mass were recorded after M. nepenthicola was introduced into laboratory-maintained pitchers (n = 10); T. nepenthiphilus did not affect larval abundance and a decrease in spider mass was recorded. Further investigations on two other dipteran larval species, the scuttle fly Endonepenthia schuitemakeri and gall midges Lestodiplosis spp., reported reduced numbers with the introduction of M. nepenthicola. We further tested this predation on dipteran larval abundance by its introduction, removal, and re-introduction to pitchers in the field (n = 42) over 1 mo. The spider's absence and presence significantly influenced larval numbers: all four dipteran species reported a significant decrease in numbers after M. nepenthicola was introduced. These results are one of the first to demonstrate the influence of a terrestrial phytotelm forager on the abundance of pitcher organisms via direct predation, reiterating the ecological importance of terrestrial phytotelm predators on phytotelm community structure and dynamics.