A functional traits approach was adopted to examine patterns of fish diversity in relation to environmental and spatial variables and for comparison with findings from earlier analyses of fish taxonomic diversity in a nearly pristine river in the Llanos region of Colombia. Fishes were surveyed during the low-water period at 34 sites along the longitudinal fluvial gradient of the Bita River, a clearwater tributary of the Orinoco River. We compiled a matrix of 37 traits associated with locomotion, feeding, and defense for 132 species to compute functional β diversity metrics among four reaches along the entire longitudinal fluvial gradient and also within reaches. Functional redundancy (trait under-dispersion) was found to be common throughout the fluvial gradient. Functional β diversity was high at both spatial scales, with widespread evidence of functional nestedness and functional turnover, especially in upper reaches. In the Bita River, environmental filtering and stochastic processes, such as random dispersal, appear to be the dominant mechanisms influencing fish functional diversity. Inferences derived from analysis of functional versus taxonomic diversity are largely congruent, although analysis of functional β diversity found more evidence of nestedness than turnover at both spatial scales. Both lines of evidence stress the importance of habitat heterogeneity and aquatic habitat connectivity for conservation of high species diversity in this system.

The floristic composition of the understory plays a fundamental role in the long-term conservation of the diversity, structure, and function of mountain cloud forests in the Andes. We evaluated the relationship between the understory tree floristic composition of four types of predefined cloud forests and the canopy structure, the light transmitted to the understory, and the effect of topography. Through multivariate analysis, we found an environmental gradient correlated with light penetration into the understory and a gradient associated with the slope and, to a lesser extent, with the elevation. Then, we identified floristically well-differentiated ecological groups in response to environmental conditions; however, the groups only partially coincided with the understory composition of the predefined forests. We found environmental response species groups such as Roupala obovata and Beilschmiedia sulcata that are indicator species of sites with lower light penetration into the understory but with steeper slopes and higher elevation. In comparison, Clusia multiflora and Zanthoxylum quinduense to be the main indicator species from sites with greater light penetration into the understory and lower slope and elevation. These findings support appropriate species selection when implementing restoration strategies in forest landscape restoration plans.

Rattus species pose a significant threat to the Philippines, causing substantial economic losses in agriculture and posing health risks to humans. While Ecologically Based Rodent Management (EBRM) has been developed to mitigate rodent outbreaks, its implementation is challenging, particularly in the face of climate and land use changes. In this study, we aimed to potentially enhance EBRM strategies by utilizing a high-performing modelling approach, MaxEnt, to predict the habitat suitability for Rattus species in the Philippines. This study revealed that forested areas exhibit high suitability for R. tanezumi, R. exulans, and R. everetti, with a notable degree of similarities in their habitat suitability. Furthermore, the model predicted that R. argentiventer, a species with no records in the mainland of Luzon, could potentially find suitable habitats in some areas of these regions, particularly in Central Luzon. Conversely, R. norvegicus was predicted to be highly suitable for areas with high-human population density, such as urban cities. The predictive model deepens our understanding of the interactions between Rattus species and their environments across the Philippines, which is crucial for identifying high-risk areas that require immediate intervention. These results have the potential to enhance the EBRM approach more effectively on a national scale. The EBRM strategy based on the predictive outcomes of the MaxEnt model is not only crucial for the Philippines but also serve as a guiding framework for other regions facing similar challenges with rodent populations.

It is well documented that Andean bears (Tremarctos ornatus) feed extensively on plants and carrion, but their hunting habits remain understudied. Better understanding and documentation of Andean bear feeding ecology can improve conservation efforts for this vulnerable species. Here, we report an observation of an Andean bear hunting and capturing a wild guinea pig (Cavia aperea) in Chingaza National Natural Park, in Cundinamarca, Colombia. The sighting occurred in January 2023 by a team of conservationists, and we provided photographic evidence and details of the encounter. Our observation suggests that Andean bears are capable hunters of small rodents, indicating that hunting may play a more important role in the ecology of Andean bears than previously appreciated and highlighting the need for a better understanding of this feeding behaviour.

We characterised the soils and vegetation in 15 sets of four quadrats on and around mounds of Macrotermes annandalei (Isoptera, Macrotermitinae) on a plain of deep dystric clay over limestone in Deciduous Dipterocarp Forest in Northern Thailand. Termites have excavated the mounds from the deep calcareous substrate. The mound soils have darker subsoils, larger contents of clays and exchangeable cations, and higher pH values than the surrounding dystric clay loams. The thickets on the mounds are visually different from the surrounding Deciduous Dipterocarp Forest. They have few dipterocarps and are floristically similar to the regionally important Mixed Deciduous Forest. The clear visual differences are confirmed by floristic similarity, cluster, and canonical correspondence analyses for each of the tree, sapling and seedling size classes. The differences between the mound clays and surrounding red clay loams and the associations between soil and forest types are confirmed by ‘t tests’ and the significant correlations of the soil base status with the main floristic axis of the canonical correspondence analyses. Soil variability due to termites and other agents of pedoturbation can significantly contribute to short-range floristic and structural diversity in some dry tropical forests.

Boswellia papyrifera (Del.) Hochst is a flagship species of semi-arid areas of the East African region with substantial economic, ecological and cultural values. However, its persistence is currently threatened by both anthropogenic and natural pressures. This calls for an immediate conservation action. Planting seedlings of B. papyrifera in natural habitats using nursery-grown seedlings from seed and cuttings has been little successful. Fencing of naturally regenerated seedlings (wildlings) established under the parent trees could be used as an alternative option. The objective of this study was to examine the effect of fencing on the seedling establishment and growth of B. papyrifera wildlings. The experiment was conducted using 36 plots in fenced and open conditions. The results showed that fencing significantly enhances the establishment and growth of B. papyrifera wildlings compared to the open areas. Fenced wildlings exhibited higher survival rates, increased height, greater leaf numbers, larger root collar diameters, larger leaf areas and higher leaf biomass compared to non-fenced wildlings. Therefore, the protection of B. papyrifera seedlings using a fencing intervention can improve the overall establishment and development of B. papyrifera seedlings, thereby contributing to the sustainable conservation and restoration of this valuable species.

Mature leaves of tree seedlings were exposed to high light in four experimental gaps in the Jamaican upper montane rainforest (UMRF). Two of the six species studied were light-demanders: Alchornea latifolia and Clethra occidentalis. Two were gap-favoured: Pittosporum undulatum (an invasive) and Palicourea alpina (a subcanopy shrub). One was intermediate: Hedyosmum arborescens, and one was shade-tolerant: Guarea glabra. After five months, the following significant changes occurred in shade leaves that were exposed to gaps (‘shade-to-gap’ leaves; values as % of those in the pre-gap shade): maximum rate of photosynthesis + 40% (Alchornea), +35% (Clethra), −34% (Pittosporum), +72% (Palicourea); dark respiration +120% (Alchornea), +140% (Clethra), +60% (Pittosporum), +233% (Palicourea), +175% (Hedyosmum), +100% (Guarea); leaf thickness +18% (Alchornea), +18% (Clethra), +14% (Palicourea); leaf mass per unit area +18% (Alchornea), +15% (Pittosporum). Leaves produced in the gaps were (as a percentage of total live leaf number) 74% (Alchornea), 71% (Clethra), 50% (Pittosporum), 71% (Palicourea), 62% (Hedyosmum) and 50% (Guarea). Photosynthetic rates of leaves produced in the gaps were 53–120% higher than ‘shade-to-gap’ leaves. Overall, shade leaves on the three native, more light-demanding species (Alchornea, Clethra and Palicourea) showed photosynthetic acclimation, while the more shade-tolerant species (Hedyosmum and Guarea and Pittosporum undulatum) showed little acclimation in shade-to-gap leaves.

Edge effects change biodiversity patterns and ecological processes, particularly in tropical forests. To understand the synergistic impact of multiple edges, this study examines how edge influence (EI) is associated with life-history traits (snout-vent length and body temperature), diversity and microhabitat of amphibians as well as habitat characteristics in a tropical forest in Ecuador. We used EI, a metric that calculates cumulative effects across all nearby edges, in combination with five environmental variables that are part of the amphibians’ microhabitat (temperature, humidity, slope, canopy cover and leaf litter depth) to understand how their biodiversity patterns are impacted. Our results show that most amphibian species tend to be habitat specialists, and many had an affinity for forest edges and warmer habitats. We do not find significant correlations between EI and amphibian life-history traits and diversity. Our findings corroborate previous results that many amphibian species tend to be positively associated with habitat fragmentation and show that this association is likely driven by thermal regulation.

The estimation of leaf litter turnover is often limited to early-stage decomposition using unrepresentative models and litter types. In tropical secondary forests, particularly exotic-dominated novel forests, the characterisation of litter turnover remains poor. This study estimated the annual turnover of in-situ leaf litter across four forest successional types in Singapore using a Weibull residence time model. Litter turnover and nutrient dynamics diverged between young secondary and old-growth forests. In particular, within novel forests, annual phosphorus return via leaf litterfall was three times that of primary forests, while the mass loss of in-situ leaf litter was highest among all forest successional types, estimated at 92.8% annually with a mean residence time of 176 days, resulting in a litter pool size a third that of primary forests. Our findings suggest that tree species composition and species-specific effects shaped the observed variations in litter turnover and nutrient dynamics across forest successional types and forest stands, whereas tree species richness, canopy structure, soil nutrient levels, and microclimate were found to be non-predictors. Taken together, our study provides an insight into litter turnover in human-modified tropical landscapes increasingly characterised by novel forests, potentially leading to a reduction in surface litter and soil organic carbon pools.

One of the largest remnants of tropical dry forest is the South American Gran Chaco. A quarter of this biome is in Paraguay, but there have been few studies in the Paraguayan Chaco. The Gran Chaco flora is diverse in structure, function, composition and phenology. Fundamental ecological questions remain in this biome, such as what bioclimatic factors shape the Chaco’s composition, structure and phenology. In this study, we integrated forest inventories from permanent plots with monthly high-resolution NDVI from PlanetScope and historical climate data from WorldClim to identify bioclimatic predictors of forest structure, composition and phenology. We found that bioclimatic variables related to precipitation were correlated with stem density and Pielou evenness index, while temperature-related variables correlated with basal area. The best predictor of forest phenology (NDVI variation) was precipitation lagged by 1 month followed by temperature lagged by 2 months. In the period with most water stress, the phenological response correlates with diversity, height and basal area, showing links with dominance and tree size. Our results indicate that even if the ecology and function of Dry Chaco Forest is characterised by water limitation, temperature has a moderating effect by limiting growth and influencing leaf flush and deciduousness.

Flagship species are those chosen to raise support for broader conservation marketing campaigns and can be used as symbols of the ecosystem services and evolutionary history of particular areas. Thus, flagship species can be employed for the protection of endangered species and threatened ecosystems. Northeastern Michoacán, Mexico, is an important region for amphibian diversity but approximately 40% of its mature forest has been removed. Among northeastern Michoacán amphibians, the use of Ambystoma ordinarium as a flagship species is supported by its co-occurrence with other threatened amphibians along riparian zones. To support this proposal, however, it is important to assess the functional traits and evolutionary history of amphibian species sharing their habitat with A. ordinarium. To evaluate the potential of A. ordinarium as a flagship species, we estimated the functional and phylogenetic diversity of amphibian assemblages in 60 riparian zones. The results showed that amphibian assemblages sharing habitat with A. ordinarium presented higher functional and phylogenetic diversity than those in which this species was absent. These results highlight the potential of A. ordinarium as a flagship species for the protection of associated amphibian species, their functions, and evolutionary history.

The extensive clearing and modification of forests by anthropogenic activities is a major driver of biodiversity loss. Declines of common species are especially concerning because of the potentially large cascading effects they might have on ecosystems. Regrowth of secondary forests may help reverse population declines by restoring habitats to similar conditions prior to land conversion but the value of these secondary forests to fauna is not well understood. We compared the abundance of a direct-developing terrestrial frog, Craugastor stejnegerianus, in riparian and upland habitats of pasture, secondary forest, and mature forest sites. Mean abundance per transect was lower in upland pasture compared to mature forest. Secondary forest had similar abundance to mature forest regardless of age. We show that conversion of forest habitat to pasture represents a conservation threat to this species. However, riparian buffers help mitigate the negative effect of conversion of forest to pasture, and regrowth of secondary forest is an effective management strategy for restoring the abundance of this common leaf-litter species.

Itaipu Hydroelectric Power Plant initiated a large reforestation programme after the expropriation of the areas destined for the formation of the reservoir. This study aimed to evaluate the effectiveness of forest restoration of the Seasonal Semideciduous Forest in the Upper Paraná Atlantic Forest ecoregion, Brazil, using epigaeic ant assemblages as bioindicators, by comparing ant species richness and composition in the Reservoir Protection Strip with adjacent areas, such as the primary forest of the Iguaçu National Park and the Permanent Preservation Area located on a rural property and agricultural areas. In total, 171 ant species were identified. Ant species richness was higher in forest than in agricultural areas and did not differ among forest areas. However, ant species composition in forest areas, regardless of the restoration technique used, was not similar to the primary forest, possibly due to variation in forest recovery time. This study highlights the great value of the Iguaçu National Park as a conservation unit. Also, it reveals that the efforts for the creation and maintenance of the Reservoir Protection Strip, which remains without anthropic interventions for years, might indeed lead to a complete recovery of the ant species composition over time, reinforcing their great importance for biodiversity conservation.

Conversion of primary forest into oil palm plantations is common in tropical countries, affecting soil properties, ecosystem services and land-use management. However, little is known about the short-range spatial soil distribution that is important for soil scientists, ecologists, entomologists, mycologists or microbiologists. In this study, seven soil properties (pH, EC (µS/m), P (mg/kg), NO3- (mg/kg), N%, C% and C:N) were measured to quantify the spatial autocorrelation across primary forest, selectively logged forest and oil palm plantation in Sabah, Malaysian Borneo. Local variograms were calculated (range ∼5 m) to determine the short-range variation, and a decision tree as well as principal component analysis were implemented to determine if the overall (global) mean differed between land uses. As hypothesised, oil palm soils deviated the most from primary forest soils, which had more fluctuating variograms and in general, a shorter range. Oil palm plantations also showed a difference in the global mean except for electrical conductivity. Selectively logged forests also differed in their short-range spatial structure; however, the global mean and variance remained similar to primary forest soil with the exception of labile phosphorus and nitrate. These results were attributed to initial plantation development, removal of topsoil, fertiliser application and topography.

Long-term climate and vegetation data were used to determine the role of rainfall variability and its seasonal distribution on litterfall nutrients. Based on a 20-year data set on rainfall (range 334–1,506 mm per year) and litterfall nutrients from old-growth tropical dry forest (TDF) in Mexico, we examined litterfall N and P concentrations from the rainy and dry seasons in response to rainfall in the rainy (June–October) and the dry (November–May) seasons, the latter referred to as out-of-season precipitation (OSP). Rainy-season litterfall N concentrations, but not P concentrations nor N:P ratios, changed positively (p < 0.001) in response to rainy-season precipitation. Dry-season litterfall N concentrations and N:P ratios, but not litterfall P, increased (p ≤ 0.02) in response to rainfall from the preceding rainy season. N:P ratios of dry-season litterfall in years with OSP were higher only during dry years and N concentrations decreased in wet years (p < 0.05). The narrow range in dry-season litterfall P concentrations (1.00–1.15 mg g-1), irrespective of rainfall amount and OSP, suggests P conservation. The variation in litterfall N, but not litterfall P, in response to rainfall variability reveals a divergent nutrient response along steep changes in water availability in this TDF.

Oil palm is one of Southeast Asia’s most common crops, and its expansion has caused substantial modification of natural habitats and put increasing pressure on biodiversity. Rising global demand for vegetable oil, coupled with oil palm’s high yield per unit area and the versatility of the palm oil product, has driven the expansion of oil palm agriculture in the region. Therefore, it is critical to identify management practices that can support biodiversity in plantations without exacerbating negative impacts on the environment. This study focuses on day-flying Lepidoptera (butterflies and moths), which contribute to the ecosystem functioning as pollinators, prey, and herbivore species. We assessed whether density and behaviours of day-flying Lepidoptera varied between different habitats within oil palm plantations and across seasons. We surveyed the density and behaviours of Lepidoptera communities in mature industrial oil palm plantations within the Biodiversity and Ecosystem Function in Tropical Agriculture (BEFTA) Programme sites, in Riau, Indonesia. We surveyed two distinct habitats within the plantations in March and September 2013: Edge habitats, which were bordered by plantation roads on one side, and Core habitats in the centre of oil palm planting blocks. We conducted analyses on the effect of habitat type and season on both the overall density and behaviour of Lepidoptera communities and, independently, on the most common species. In our surveys, we observed 1464 individuals across 41 species, with a significantly higher density in Edge than in Core habitats. While there was no significant difference between overall density in March and September surveys, there was an interaction between season and habitat, with density increasing more markedly in Edge than Core areas in September. There was also a significant effect of habitat and season on behavioural time budget for the community as a whole, with more active behaviours, such as foraging and mating, being recorded more frequently in Edge than Core habitats, and more commonly in September than March. The effect of habitat type, season, and their interaction differed between the six most common species. Our findings indicate that Lepidoptera abundance is affected by habitat characteristics in a plantation and can therefore be influenced by plantation management practices. In particular, our study highlights the value of road edges and paths in plantations for day-flying Lepidoptera. We suggest that increased non-crop vegetation in these areas, achieved through reduced clearing practices or planting of flowering plants, could foster abundant and active butterfly communities in plantations. These practices could form part of sustainability management recommendations for oil palm, such as those of the Roundtable on Sustainable Palm Oil.

A trade-off between structural and chemical defences against herbivory in woody plants is alleged to depend on edaphic factors in African savannas. We studied anti-herbivory traits, in an edaphic mosaic of fertile and infertile soils within a savanna landscape in East Africa, towards elucidating herbivory defence traits expressions in woody plants of African savannas. We used data of 81 plants for 8 species from 8 sites — four sites from fertile soils (42 plants) and another four sites from infertile soils (39 plants). We did not find a general divide between structural and chemical strategies in our data. Instead, we found a range of defence traits combinations. Our results highlight that in woody plants of African savannas, chemical and structural defences can augment each other, and not necessarily trade-off. The diversity of herbivores, ranging from insects to mesobrowsers, may have driven the evolution of multiple defence strategies within the African savannas.

Ferns (Polypodiophyta) are an abundant floral element of the tropics with high sensitivity to environmental conditions and good indicators of overall biodiversity. Here, we set out to identify which geochemical factors determine fern diversity in a low-montane tropical rainforest in Eastern Ecuador. We conducted a field survey of high-spatial resolution completing a comprehensive fern inventory across two elevational ranges, combined with biochemical characterisation of the underlying soils. While α-diversity was negatively correlated with cation exchange capacity (CEC) and with elevation, β-diversity increased with elevation and with geographic distance, as predicted. Our results confirm that ferns have a high sensitivity to both elevational and environmental gradients, where the latter in this study was derived from enhanced aluminium, iron and calcium contents in some of the studied soils. Further monitoring of fern communities could therefore help to better understand and predict how environmental change may impact biodiversity, with a particular focus on threats potentially arising from toxic elements being released in tropical soils through modified soil CEC.

Monoon liukiuense (Annonaceae) is an endangered tree species distributed in Iriomote Island and Hateruma Island in the Ryukyu (Nansei) Islands, Japan, and in Orchid Island (Lanyu) in Taiwan. While its habitat is confined to small areas surrounded by human-altered landscapes, the matured trees bear abundant fruits, and many offspring grow under the mother trees. M. liukiuense is hypothesised to have lost effective seed dispersers. To test this hypothesis, fate of its seeds and the behaviour of frugivores were observed using time-lapse photography during three fruiting seasons from June 2015 to August 2016 in Iriomote Island, Japan. Although several animal taxa were observed to consume the fruit pulp, only two volant animals, namely the Yaeyama flying fox and large-billed crow, were proposed as seed dispersal agents for M. liukiuense. The present study shows that an average of 82% of the fruits in the canopies fell directly beneath the fruiting trees and an average of 90% of the seeds on the forest floor remained in their original positions. These results suggest that M. liukiuense has lost most of its seed dispersal agents and the chance to expand its distribution.

The bushy-tailed opossum (Glironia venusta) is a small arboreal marsupial found in the Amazon basin. G. venusta is rarely seen and has few published sightings throughout its range. Videos (N = 79) were obtained from arboreal camera traps located in the Las Piedras Amazon Center near the Las Piedras River (SE Peru) from April 2017 until November 2017. Our new records, the first for the Las Piedras River, demonstrate that the species is nocturnal with activity peaks at 3:00 h and 20:00 h in the hours of complete darkness. The abundance of camera trap footage of such a rarely observed species further demonstrates the effectiveness of arboreal camera trapping to conduct species assessments.