Concentrations of cadmium (Cd), lead (Pb), copper (Cu), zinc (Zn) and iron (Fe) were measured in three macroalgal species, Codium simulans, Sargassum sinicola and Gracilaria pachydermatica, and in the sea slug Elysia diomedea, living in marine ecosystems dominated by Sargassum species and located near exploited phosphorite deposits. Metal concentrations in macroalgae and sea slugs were significantly different among sites. The highest concentrations of Cd recorded in C. simulans and S. sinicola, as well as in E. diomedea were recorded at the site closest to the phosphorite deposit. In general, Cd and Zn concentrations in E. diomedea were higher than those recorded in specimens of C. simulans, S. sinicola and G. pachydermatica. In contrast, Pb, Cu, and Fe concentrations in E. diomedea were lower than or similar to those in macroalgae from all sampled sites. The information generated contributes to the knowledge about potential mobility and metal bioaccumulation at lower trophic levels in marine eco systems.

Benthic dinoflagellates collected in spring–summer 2010 and 2011 from intertidal sandy sediments of the shore of Wimereux (north-east English Channel, France) were examined by light microscopy, and some of them by scanning electron microscopy. High dinoflagellate species richness, 70 species, was evidenced when compared to the plankton observed in the coastal waters of the north-east English Channel. The greatest difficulty in performing accurate species identification mainly concerned the heterotrophic species of Amphidinium sensu lato, the laterally flattened species of Amphidiniopsis, as well as some heterotrophic species of Thecadinium. Several undescribed species are here illustrated, mainly within these genera. The differences in size between species of Herdmania and Sabulodinium suggest the occurrence of at least a second species for these monotypic genera. The species Amphidiniopsis hexagona, A. rotundata, A. uroensis and Sinophysis minima are reported for the first time in the Atlantic Ocean and on European coasts. Although these species were only previously known from the Pacific Ocean, they should not necessarily be considered as newcomers or invasive species due to the scarce coverage of the previous studies on sand-dwelling dinoflagellates.

This paper reports on the phytoplankton community, its composition, structure and distribution in Changjiang estuary from February 1999 to March 2000. Two hundred and eight species were identified in the dry and flood periods. Diatoms, with 143 species observed, was the most abundant phytoplankton group, accounting for 68.75% of the total phytoplankton species number. Skeletonema costatum was dominant among all the species. The phytoplankton of Changjiang estuary in China was divided into five ecological categories: freshwater species, estuary brackish water species, inshore low salinity species, inshore widespread species and off-sea high salinity species. During the dry period, the major phytoplankton populations in the surface layer were estuary inshore and offshore populations, distinguished from the composition of the bottom layer. The community structure was similar in the two layers during the flood period. The phytoplankton species diversity was calculated for Simpson, Shannon–Weaver diversity and evenness indices, and found to be higher in the dry period, due to the simple dominant species and low spatial heterogeneity in the flood period. Higher phytoplankton abundance was observed in the surface layer during the flood period. The phytoplankton species distribution, coinciding with the dominant species distribution, varied with salinity, and their abundance correlated significantly with nutrients and light.

Many reef-building corals photoacclimate by increasing levels of chlorophyll per microalgal cell with depth, but mechanisms of photoacclimation in coral reef sea anemones remain poorly understood. We determined variation in ambient irradiance and patterns of abundance, microhabitat use, chlorophyll and microalgal cell concentrations in clownfish sea anemones Entacmaea quadricolor from 0 to 43 m depth on a coral reef at Aqaba, Jordan, northern Red Sea. In shallow areas, anemones occupied shaded reef microhabitats exposed to significantly lower irradiance than in the adjacent open water, but on the deep reef slope they occupied unshaded habitats. Anemone abundances were the highest observed thus far in the Red Sea, and peaked at mid depth on the reef slope. Microalgal abundance in anemone tentacles increased four-fold from the shallow to deep reef, while chlorophyll-a concentrations per algal cell did not vary significantly with depth. We conclude that E. quadricolor photoacclimates using two major mechanisms: (1) occurrence in shaded microhabitats when shallow, thus reducing exposure to high irradiance, and (2) increasing microalgal abundance with depth, thereby enhancing photosynthetic efficiency at low irradiance.

The azooxanthellate sun corals Tubastraea coccinea and T. tagusensis are invasive species which were introduced into Brazilian shallow-water tropical rocky reefs by oil and gas platforms. Both species are simultaneous hermaphrodites and brooders. Histological analysis shows a continuous reproduction with the presence of different stages of development of oocytes, spermatic cysts and larvae occurring together in the same polyps (overlapping). Gametogenesis, embryogenesis, planulation and settlement were observed. Although most of the colonies showed only oocytes, none had only testes. Spermatic cysts were observed in 8.3% of T. coccinea colonies and in 5.5% of colonies of T. tagusensis. The maximum diameter of oocyte of T. tagusensis (1252.5 µm) was greater than T. coccinea (901.8 µm) and mature spermaries 700 µm in diameter formed the typical arrangement of ‘bouquets’. Although all colonies showed oocytes throughout the year, two reproductive peaks of 3–4 months duration were observed. The larvae of T. coccinea and T. tagusensis had a competency period of 18 d in aquaria and settled near the parental colony. The investigation of gametogenesis, temporal patterns of reproduction, fecundity and sexual maturation helps to explain the rapid expansion in to new habitats and high population growth in these invasive sun corals.

The first record of the plexaurid genus Psammogorgia from the shallow waters of Peru is reported here. A new species (Psammogorgia hookeri sp. nov.) is described from Isla San Gallán, Paracas National Reserve. The new species was morphologically analysed using light microscopy and scanning electron microscopy. It is distinguished from the others in the genus by its small size; prominent calyces with wide lips around polyp apertures and without a special type of sclerites, but with a concentration of irregular, thorny spindles and wart-clubs around the calyx rim; coenenchymal sclerites that do not reach more than 0.2 mm long; the occurrence of conspicuous star-like radiates; and the colour of the colony and coenenchymal sclerites, which is coral red. The results increase species richness within a genus that has not been studied for more than a century, and contribute to the establishment of characters for further morphological studies. Additionally, the new species adds value to existing protected areas and to the octocoral biodiversity records for the Peruvian region and the eastern Pacific.

The spaces between sand grains are home to a myriad of microscopic marine eukaryotes, including kalyptorhynch rhabdocoels equipped with an eversible proboscis that enables them to capture microscopic prey living in these environments. The structure of the kalyptorhynch proboscis separates the two major subclades within the group: the Schizorhynchia (bifurcated proboscis) and the Eukalyptorhynchia (unbranched proboscis). A survey of meiofaunal metazoans in the Pacific north-west led to the discovery of three new schizorhynch species (Undicola tofinoensis gen. nov., sp. nov., Schizorhinos vancouverensis gen. nov., sp. nov. and Linguabana tulai gen. nov., sp. nov.) and two new eukalyptorhynch species (Thinodactylaina tlaoquiahtensis gen. nov., sp. nov. and Rostracilla nuuchahnulthensis gen. nov., sp. nov.). This survey also recovered the putative cosmopolitan eukalyptorhynch (Polycystididae) Gyratrix hermaphroditus Ehrenberg, 1831. We performed molecular phylogenetic analyses on 18S rDNA sequences from all five novel isolates and from all available kalyptorhynch species in GenBank. The molecular data supported the monophyly of the Eukalyptorhynchia and Schizorhynchia and helped demonstrate the boundaries between different species within the Kalyptorhynchia.

Two new species of free-living nematodes discovered from the sediments in the East China Sea are described: Linhystera breviapophysis sp. nov. and L. longiapophysis sp. nov. Both species possess a dorso-caudally directed gubernacular apophysis, which makes them distinctly different from the two already known species of Linhystera. Linhystera breviapophysis is characterized by a gubernacular apophysis about 3.3 μm long, the presence of a crown of cervical setae and a filiform tail. Linhystera longiapophysis is characterized by a prominent gubernacular apophysis about 10 μm long, sparse cervical setae and a long filiform tail. An emended diagnosis of Linhystera and a pictorial dichotomous key to the species are given.

A twelve-month investigation was undertaken on how copepod community structure varied in relation to environmental factors in the Coleroon estuary, south-east India. Sampling was monthly, from Station 1 in the sea to Station 4 in the Vettar backwaters. Canonical correspondence analysis (CCA) was applied to elucidate the environmental factors affecting the copepod community. A total of 104 copepod species in 38 genera and 26 families were recorded, with the Calanoids, Acartia erythraea and Oithona brevicornis being the most dominant. At all four stations, both these species loaded near the intercept of CCA axes 1 and 2, perhaps reflecting that they were autochthonous. Most species occurred in distinct seasonal patterns. Abundances ranged from 13 × 103 to 215 × 103 (ind. m−3). Coleroon waters showed high diversity (bits/ind.), from 5.29 at Station 3 to 4.97 at Station 4. Abundance correlated positively with temperature and salinity and negatively with rainfall, dissolved oxygen concentration (DO) and pH. Species diversity correlated strongly with abundance (P < 0.01). Abundance and diversity were highest during the summer, and both correlated positively with salinity. Temperatures (air and water), salinity, pH and DO varied in the ranges 26–36°C, 25–34.2°C, 9–38, 7.0–8.7 and 3.0–6.8 ml l-1, respectively. Nitrate, nitrite, phosphate and silicate (µM) varied in the ranges: 4.7–64.5, 0.4–14.1, 0.2–12.9 and 9.3–148, respectively.

A new species of Boholina, B. ganghwaensis sp. nov. is described, based on specimens collected from burrows of the manicure crab, Cleistostoma dilatatum, in the tidal flat of Ganghwa Island in western Korea. The new species is closely similar to B. purgata and B. parapurgata by having a pointed process on the posterior angles of the second and third pedigerous somites and a similar rostrum in the female, but can be distinguished from its congeners by the following characters: in females by the genital double-somite with small hook-like process on each gonoporal plate, the setation of the distal endopodal segment of mandible, the basis and first endopodal segment of the maxillule incompletely separated, the inner distal spine/outer terminal spine length ratio on P5; and in males by the distal spine present on the posterior surface of the basis of both P5 and the length/width ratio of the endopod of the right P5. This is the first Bololina species recorded from the north-west Pacific.

A conspicuous part of the parasite fauna of marine fish are ectoparasites, which attach mainly to the fins or gills. The abundant copepods have received much interest due to their negative effects on hosts. However, for many localities the copepod fauna of fish is still poorly known, and we know little about their temporal stability as long-term observations are largely absent. Our study provides the first inventory of ectoparasitic copepods on fish from the western Wadden Sea (North Sea) based on field data from 1968 and 2010 and additional unpublished notes. In total, 47 copepod parasite species have been recorded on 52 fish host species to date. For two copepod species parasitizing the European flounder (Platichthys flesus), a quantitative comparison of infection levels between 1968 and 2010 was possible. Whereas Acanthochondria cornuta did not show a change in the relationship between host size and infection levels, Lepeophtheirus pectoralis shifted towards the infection of smaller hosts, with higher infection levels in 2010 compared to 1968. These differences probably reflect the biology of the species and the observed decrease in abundance and size of flounders during the last decades. The skin-infecting L. pectoralis can probably compensate for dwindling host abundance by infecting smaller fish and increasing its abundance per given host size. In contrast, the gill cavity inhabiting A. cornuta probably faces a spatial constraint (fixed number of gill arches), thus limiting its abundance and setting a minimum for the host size necessary for infections.

A population of the mud shrimp, Upogebia major, inhabiting Kasaoka Inlet had a higher frequency of intersex males compared to other populations in the Seto Inland Sea, Japan. This population also featured a high prevalence of the branchial epicaridean parasite, Gyge ovalis, and inhabited a tidal flat characterized by increasingly softer sediments going into the lower tidal areas. We examined the rates at which infection co-occurred with intersex features and checked whether infection patterns varied with intersex occurrence according to host size and tidal level position. Fewer specimens were both intersex and infected than those having only one of either condition; infection was not a significant predictor of intersex. However, infection in young hosts that recovered from the parasite could be associated with the intersex morphologies and account for the majority of cases that were intersex but parasite-free. Deletions of the cuticular ridge (CRD) between the first and second abdominal segment and tidal level position were correlated with intersex. Lower tidal zone mud shrimp were, respectively, three and four times more likely to be intersex and exhibit CRD than those in the upper tidal zone. Potentially inclusive factors that may influence these trends are higher rates of early infection and increased exposure to sediment-bound pollutants in mud shrimp inhabiting the lower tidal areas.

The Azorean seabed is depauperate in terms of bivalve species richness, there being only between ~70 and 80 recorded to date, most being sub-tidal and generally lacking of specialists. Analysis of large numbers (>3200) of Azorean bivalve shells has revealed that, overall, each species is only ~50% the shell length size of Mediterranean conspecifics. Thus, although Azorean bivalve size may be a consequence of decreasing latitude (Bergmann's Rule), the islands are located at approximately the same latitude as the Mediterranean (and are influenced by those waters) where larger conspecifics occur. Hence, the main reason for bivalve dwarfism in the archipelago appears to result from low oceanic productivity (Foster's Rule). This, in turn, is associated with low diversity, possibly resulting from past extinctions and isolation, and low population sizes, except for Ervilia castanea, which here overwhelmingly occupies higher-energy inshore habitats and associated higher productivities. Nevertheless, this species too is dwarfed by mainland conspecifics. Similarly, the introduced Venerupis decussata, found solely within the lagoonal environment of Fajã de Santo Cristo on São Jorge, is somewhat smaller than its mainland conspecifics, although it is abundant enough to warrant artisanal exploitation. This study therefore, supports Foster's Rule and argues for the role of nutrient deficiency in regulating Azorean species richness and individual maximum size. In waters of locally higher productivities, however, population densities increase, but not size.

A new species of the family Tritoniidae is described from the tropical South Atlantic Ocean. The animal was found off north-east Brazil. Tritonia khaleesi sp. nov. is up to 12 mm long, with a slender white body, of which the notum is covered with one broad white band extending from between the eyes and veil to the tail; veil with 4 velar appendages; retractable white rhinophores; rhinophoral sheath with fleshy extension; seven pairs of branchial plumes; the anus is located between the 3rd and 4th gills on the right side, and the genital opening is under the 2nd gill. Internally, T. khaleesi sp. nov. is distinguished from other tritoniids by jaws with 10–14 rows of denticles on the inner lips, absence of stomach plates and the radular formula 32 × 2–5.1.1.1.2–5 teeth. Tritonia khaleesi sp. nov. is the only Tritonia that possesses a unicuspid rachidian tooth as an adult.

Preliminary molecular data obtained from one mitochondrial (COI) and one nuclear marker (H3) from the available species of the genus Okenia have revealed a new cryptic species of this genus. The new species (Okenia harastii sp. nov.), from New South Wales (NSW) eastern Australia, has a light brown body with scattered dark brown and white spots of different sizes, and six pairs of translucent mantle processes. Okenia harastii sp. nov. is compared with other Okenia species from NSW and with other morphologically similar species.

A low-cost and non-invasive survey technique focused on pelagic sharks was evaluated during an ecotourism cruise on two Sudanese reefs, Angarosh and Sha'ab Rumi, in the Southern Red Sea. The research technology was based on a set of small, underwater video recording cameras and a pair of laser pointers. Video footage provided insight into shark biodiversity on the two reefs, detecting five species, Alopias vulpinus, Sphyrna lewini, Triaenodon obesus, Carcharhinus amblyrhynchos and Galeocerdo cuvier, during 15.8 h of video recording. These recordings also provided preliminary information on aggregations of S. lewini. The laser pointers were used to measure the size of sharks, providing seven total length (TL) measurements for S. lewini (N = 2) and C. amblyrhynchos (N = 5), confirming the possibility of easily obtaining size parameters using this tool. These low-cost and user-friendly instruments provide ecotourism divers with an opportunity to become involved in marine research projects.

This paper studies age, growth and hatch date distributions of young of the year striped sea bream Lithognathus mormyrus from Canakkale near shores by using a beach seine during September 2006–December 2007. Using otolith microstructure analysis, a total of 416 specimens ranging from 20 to 103 mm LT were aged and found to be between 30 and 307 days old. Average growth rates were estimated to 0.325 mm d−1. The juvenile instantaneous mortality coefficient was found to be 0.0219, which corresponds to a daily mortality of 2.16%. The hatching period of the striped sea bream was determined to occur between April and January, with relatively higher hatching frequency in August.

The population biology, life history parameters and diet of the shorthead drum Larimus breviceps were assessed in Caraguatatuba Bight, a shallow non-estuarine environment. Two homogeneous areas, South and North, were selected, avoiding major sources of continental waters. Monthly from October 2003 to October 2004, three random samples were taken by trawling from 800 to 1600 m outward from the waterline. Larimus breviceps was the third most abundant species during the study period, and was considerably more abundant from February to May 2004. Smaller individuals were also more abundant during this period, which we therefore considered the main recruitment period of the species. The predominance of individuals of a limited size range (6–12 cm total length) seems to indicate that the area functions as a nursery for L. breviceps, sheltering late-juvenile individuals. This feature complicated the estimation of life history parameters, but by taking into account the peculiarities of the area and the identification of similar modal progressions during the sampling period, we obtained reasonable values for the parameterization of the von Bertalanffy Growth Model (L∞ = 32.25 cm, K = 0.72, tmax 4.38 y, Z = 12.104). The total mortality index does not reflect mortality rates only, but also the migration of older individuals to other, probably deeper, areas. The diet was based mainly on Crustacea, specifically Decapoda shrimps, with slight seasonal alterations.

The forkbeard, Phycis phycis, is an important commercial species in Portugal; however, little information is available on its biology. Age and growth of the forkbeard from Portuguese continental waters were studied using 687 otoliths from specimens caught between May 2011 and December 2012. Otoliths were transversally sectioned, and assigned ages were validated by marginal increment analysis and edge analysis, and indices of precision were also calculated to corroborate ageing within and between readers. Validation techniques showed that an annual growth increment is formed every year, corresponding to the succession of an opaque and a translucent growth zone. Specimens ranged from 15.5 to 67.1 cm total length (TL), and their estimated ages ranged between 0 and 18 years. The forkbeard is a relatively slow growing, long lived species, that does not show sexual dimorphism in growth. The von Bertalanffy growth parameters estimated for forkbeard from the Portuguese continental waters were L∞ = 75.14 cm TL, k = 0.10 yr−1 and t0 = −2.09 yr.

The silver roughy, Hoplostethus mediterraneus is a benthopelagic cosmopolitan fish regularly caught as by-catch of the deep-water crustacean trawl fishery (CTF) in the central–eastern Mediterranean. Monthly samples of silver roughy were sampled from the catches of four commercial trawlers in 2004. Each trawler operated in different fishing grounds (FGs), located off Northern Tunisia, South of Sicily, Malta Islands and in South Levant, for which different exploitation levels are reported. The overall length–frequency distribution (LFD) was constructed, and fishing impact indices (length as percentage of LFD, optimum and maximum length, percentage of mega-spawners and total mortality/von Bertalanffy curvature ratio) were calculated. In spite of an overall acceptable status (juveniles, matures and mega-spawners were present in the catch), sampling data revealed significant differences in LFD shape and status indices between FGs. Those FGs traditionally considered more exploited (Northern Tunisia and South of Sicily) showed a dominance of juveniles, a rarefaction of mega-spawners, a reduction in maximum and asymptotic length and a higher Z/K ratio. Considering the general homogeneity of Mediterranean deep-water habitats, the pelagic dispersal of eggs and the poor swimming capabilities of silver roughy, the present results indicated that deep-water trawling may induce a slow and subtle, although significant, erosion of the older, late maturing and slow growing component of the stocks in the Mediterranean (so-called longevity-overfishing).