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Microsatellite loci to determine population structure of Labeo dero (Cyprinidae)

Published online by Cambridge University Press:  15 March 2005

Vindhya Mohindra ,
Anshumala ,
Peyush Punia ,
Lalit Narain ,
Dhurendra Kapoor  and
Kuldeep K. Lal
Vindhya Mohindra
Affiliation:
National Bureau of Fish Genetic Resources (ICAR), Canal Ring Road, P.O. Dilkhusha, Telibagh, Lucknow 226002 (UP), India
Anshumala
Affiliation:
National Bureau of Fish Genetic Resources (ICAR), Canal Ring Road, P.O. Dilkhusha, Telibagh, Lucknow 226002 (UP), India
Peyush Punia
Affiliation:
National Bureau of Fish Genetic Resources (ICAR), Canal Ring Road, P.O. Dilkhusha, Telibagh, Lucknow 226002 (UP), India
Lalit Narain
Affiliation:
National Bureau of Fish Genetic Resources (ICAR), Canal Ring Road, P.O. Dilkhusha, Telibagh, Lucknow 226002 (UP), India
Dhurendra Kapoor
Affiliation:
National Bureau of Fish Genetic Resources (ICAR), Canal Ring Road, P.O. Dilkhusha, Telibagh, Lucknow 226002 (UP), India
Kuldeep K. Lal
Affiliation:
National Bureau of Fish Genetic Resources (ICAR), Canal Ring Road, P.O. Dilkhusha, Telibagh, Lucknow 226002 (UP), India
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Abstract

Five polymorphic microsatellite DNA loci were identified in Labeo dero (Hamilton Buchanan), through cross-species amplification. Thirty-one primers developed for three cyprinids were tested in the study. The genetic variation detected at each polymorphic microsatellite locus was analysed. Significant genotype heterogeneity indicated that the samples are not drawn from same genepool. The identified microsatellite loci exhibited promise for use in fine scale population structure analysis of L. dero.

Keywords

MicrosatelliteCross-primingGenetic variationCarpLabeo dero
Type
Research Article
Information
Aquatic Living Resources , Volume 18 , Issue 1 , January 2005 , pp. 83 - 85
Copyright
© EDP Sciences, IFREMER, IRD, 2005

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References

Belkhir K., Borsa P., Goudet J., Chikhi L., Bonhomme F., 1997, GENETIX vers. 4.02, logiciel sous windows pour la génétique des populations, http://www.univ-montp2.fr/ $\sim $ genetix/genetix.htm.
Chenuil, A., Galtier, N., Berrebi, P., 1999, A test of the hypothesis of an autopolyploid vs allopolyploid origin of a tetraploid lineage: applications to the genus Barbus (Cyprinidae). Heredity 82, 373-380. CrossRef
Croojimans, R.P.M.A., Bierbooms, V.A.F., Komer, J., van der Poel, J.J., Gronen, M.A.M., 1997, Microsatellite markers in common carp (Cyprinus carpio). Anim. Genet. 28, 129-134. CrossRef
ECAFE, 1966, A compendium of major international rivers in the ECAFE region Water Resources Ser., United Nation, No. 29.
Lal, K.K., Chauhan, T., Mandal, A., Singh, R.K., Khulbe, L., Ponniah, A.G., Mohindra, V., 2004, Identification of microsatellite DNA markers for population structure analysis in Indian major carp, Cirrhinus mrigala (Hamilton-Buchanan 1882). J. Appl. Ichthyol. 20, 87-91. CrossRef
Lessios, H.A., 1992, Testing electrophoretic data for agreement with Hardy Weinberg expectations. Mar. Biol. 112, 517-523. CrossRef
Mahanta P.C., Kapoor D., Dayal R., Ponniah A.G., 1994, Prioritization of the Indian fish species for conservation. In: Dehadrai, P.V., Das, P., Verma, S.R (Eds.), Threatened Fishes of India; Proc. National Seminar on Endangered Fishes of India, Nature Conservators, pp. 377-386.
Mohindra, V., Mishra, A., Palanichamy, M., Ponniah, A.G., 2001, Cross-Species amplification of Catla catla microsatellite locus in Labeo rohita. Indian J. Fish. 48, 103-108.
Naish, K.A., Skinbiski, D.O.F., 1998, Tetranucleotide microsatellite loci for Indian major carps. J. Fish Biol. 53, 886-889. CrossRef
Neff, D.B., Gross, M.R., 2001, Microsatellite evolution in vertebrates: inference from AC dinucleotide repeats. Evolution 9, 1717-1733. CrossRef
Nei, M., Chesser, R.K., 1983, Estimation of fixation indices and gene diversities. Ann. Hum. Genet. 47, 253-259. CrossRef
Raymond, M., Rousset, F., 1995, GENEPOP (vers. 1.2): A population genetics software for exact test and ecumenicism. J. Hered. 86, 248-249. vers. 3.3d available, hyperlink http://www.cefe.cnrs-mop.fr/ CrossRef
Ruzzante, D.E., Taggart, C.T., Cook, D., 1996, Goddard S., Genetic differentiation between inshore and offshore Atlantic cod (Gadus morhua) of Newfoundland: microsatellite DNA variation and antifreeze level. Can. J. Fish. Aquat. Sci. 53, 634-635. CrossRef
Tong, J., Wang, Z., Yu, X., Wu, Q., Chu, KH., 2002, Cross-species amplification in silver carp and bighead carp with microsatellite primers of common carp. Mol. Ecol. Notes 2, 245-247. CrossRef
Zardoya, R., Vollmer, D.M., Craddock, C., Streelman, J.T., Karl, S., Meyer, A., 1996, Evolutionary conservation of microsatellite flanking regions and their use in resolving the phylogeny of cichlid fishes (Pisces: Perciformes). Proc. R. Soc. London B 263, 1589-1598. CrossRef
Zheng, W., Staeey, N.E., Coffin, J., Strobeck, C., 1995, Isolation and characterization of microsatellite loci in the goldfish Carassius auratus. Mol. Ecol. 4, 791-792.