We provide a complete classification of the singularities of cluster algebras of finite type with trivial coefficients. Alongside, we develop a constructive desingularization of these singularities via blowups in regular centers over fields of arbitrary characteristic. Furthermore, from the same perspective, we study a family of cluster algebras which are not of finite type and which arise from a star shaped quiver.

We introduce the notion of a $Y$-pattern with coefficients and its geometric counterpart: an $\mathcal {X}$-cluster variety with coefficients. We use these constructions to build a flat degeneration of every skew-symmetrizable specially completed $\mathcal {X}$-cluster variety $\widehat {\mathcal {X} }$ to the toric variety associated to its g-fan. Moreover, we show that the fibers of this family are stratified in a natural way, with strata the specially completed $\mathcal {X}$-varieties encoded by $\operatorname {Star}(\tau )$ for each cone $\tau$ of the $\mathbf {g}$-fan. These strata degenerate to the associated toric strata of the central fiber. We further show that the family is cluster dual to $\mathcal {A}_{\mathrm {prin}}$ of Gross, Hacking, Keel and Kontsevich [Canonical bases for cluster algebras, J. Amer. Math. Soc. 31 (2018), 497–608], and the fibers cluster dual to $\mathcal {A} _t$. Finally, we give two applications. First, we use our construction to identify the toric degeneration of Grassmannians from Rietsch and Williams [Newton-Okounkov bodies, cluster duality, and mirror symmetry for Grassmannians, Duke Math. J. 168 (2019), 3437–3527] with the Gross–Hacking–Keel–Kontsevich degeneration in the case of $\operatorname {Gr}_2(\mathbb {C} ^{5})$. Next, we use it to link cluster duality to Batyrev–Borisov duality of Gorenstein toric Fanos in the context of mirror symmetry.

We prove that any skew-symmetrizable cluster algebra is unistructural, which is a conjecture by Assem, Schiffler and Shramchenko. As a corollary, we obtain that a cluster automorphism of a cluster algebra ${\mathcal{A}}({\mathcal{S}})$ is just an automorphism of the ambient field ${\mathcal{F}}$ which restricts to a permutation of the cluster variables of ${\mathcal{A}}({\mathcal{S}})$.

We study the realization of acyclic cluster algebras as coordinate rings of Coxeter double Bruhat cells in Kac–Moody groups. We prove that all cluster monomials with $\mathbf{g}$-vector lying in the doubled Cambrian fan are restrictions of principal generalized minors. As a corollary, cluster algebras of finite and affine type admit a complete and non-recursive description via (ind-)algebraic group representations, in a way similar in spirit to the Caldero–Chapoton description via quiver representations. In type $A_{1}^{(1)}$, we further show that elements of several canonical bases (generic, triangular, and theta) which complete the partial basis of cluster monomials are composed entirely of restrictions of minors. The discrepancy among these bases is accounted for by continuous parameters appearing in the classification of irreducible level-zero representations of affine Lie groups. We discuss how our results illuminate certain parallels between the classification of representations of finite-dimensional algebras and of integrable weight representations of Kac–Moody algebras.

We establish a combinatorial realization of continued fractions as quotients of cardinalities of sets. These sets are sets of perfect matchings of certain graphs, the snake graphs, that appear naturally in the theory of cluster algebras. To a continued fraction $[a_{1},a_{2},\ldots ,a_{n}]$ we associate a snake graph ${\mathcal{G}}[a_{1},a_{2},\ldots ,a_{n}]$ such that the continued fraction is the quotient of the number of perfect matchings of ${\mathcal{G}}[a_{1},a_{2},\ldots ,a_{n}]$ and ${\mathcal{G}}[a_{2},\ldots ,a_{n}]$. We also show that snake graphs are in bijection with continued fractions. We then apply this connection between cluster algebras and continued fractions in two directions. First we use results from snake graph calculus to obtain new identities for the continuants of continued fractions. Then we apply the machinery of continued fractions to cluster algebras and obtain explicit direct formulas for quotients of elements of the cluster algebra as continued fractions of Laurent polynomials in the initial variables. Building on this formula, and using classical methods for infinite periodic continued fractions, we also study the asymptotic behavior of quotients of elements of the cluster algebra.

Fomin–Zelevinsky conjectured that in any cluster algebra, the cluster monomials are linearly independent and that the exchange graph and cluster complex are independent of the choice of coefficients. We confirm these conjectures for all skew-symmetric cluster algebras.

We apply our previous work on cluster characters for Hom-infinite cluster categories to the theory of cluster algebras. We give a new proof of Conjectures 5.4, 6.13, 7.2, 7.10 and 7.12 of Fomin and Zelevinsky’s Cluster algebras IV [Compositio Math. 143 (2007), 112–164] for skew-symmetric cluster algebras. We also construct an explicit bijection sending certain objects of the cluster category to the decorated representations of Derksen, Weyman and Zelevinsky, and show that it is compatible with mutations in both settings. Using this map, we give a categorical interpretation of the E-invariant and show that an arbitrary decorated representation with vanishing E-invariant is characterized by its g-vector. Finally, we obtain a substitution formula for cluster characters of not necessarily rigid objects.

We investigate cluster-tilting objects (and subcategories) in triangulated 2-Calabi–Yau and related categories. In particular, we construct a new class of such categories related to preprojective algebras of non-Dynkin quivers associated with elements in the Coxeter group. This class of 2-Calabi–Yau categories contains, as special cases, the cluster categories and the stable categories of preprojective algebras of Dynkin graphs. For these 2-Calabi–Yau categories, we construct cluster-tilting objects associated with each reduced expression. The associated quiver is described in terms of the reduced expression. Motivated by the theory of cluster algebras, we formulate the notions of (weak) cluster structure and substructure, and give several illustrations of these concepts. We discuss connections with cluster algebras and subcluster algebras related to unipotent groups, in both the Dynkin and non-Dynkin cases.