Protein content (PC) and oil content (OC) are important breeding traits of soybean [Glycine max (L.) Merr.]. Quantitative trait locus (QTL) mapping for PC and OC is important for molecular breeding in soybean; however, the negative correlation between PC and OC influences the accuracy of QTL mapping. In the current study, a four-way recombinant inbred lines (FW-RILs) population comprising 160 lines derived from the cross (Kenfeng14 × Kenfeng15) × (Heinong48 × Kenfeng19) was planted in eight different environments and PC and OC measured. Conditional and unconditional QTL analyses were carried out by interval mapping (IM) and inclusive complete IM based on linkage maps of 275 simple sequences repeat markers in a FW-RILs population. This analysis revealed 59 unconditional QTLs and 52 conditional QTLs among the FW-RILs. An analysis of additive effects indicated that the effects of 13 protein QTLs were not related to OC, whereas OC affected the expression of 13 and eight QTLs either partially or completely, respectively. Eight QTLs affecting OC were not influenced by PC, whereas six and 26 QTLs were partially and fully affected by PC, respectively. Among the QTLs detected in the current study, two protein QTLs and five oil QTLs had not been previously reported. These findings will facilitate marker-assisted selection and molecular breeding of soybean.

A survey of the prevalence of rigid ryegrass (Lolium rigidum) resistant to ACCase and ALS herbicides was conducted in major-cereal growing regions in the north of Tunisia. Randomly collected ryegrass populations were assessed, using the Syngenta RISQ® test, for resistance to clodinafop-propargyl, iodosulphuron + mesosulphuron and pinoxaden. Of the 177 tested populations, 58% exhibited resistance to clodinafop-propargyl and 52% to iodosulphuron + mesosulphuron, with 40% exhibiting resistance to both herbicides. Significant variations in the frequencies of rigid ryegrass resistant to clodinafop-propargyl and/or iodosulphuron + mesosulphuron were observed between surveyed regions which may be the result of differences in the history of herbicide use. Over 50% of resistant populations contained 60% of resistant plants or more, indicating the extent of resistance evolution in these regions. Our study demonstrates that the extent of resistance to ACCase and ALS-inhibiting herbicides in rigid ryegrass is widespread in major cereal-growing regions of Tunisia. Therefore, weed management must be focused on reducing the frequency of herbicide application, using multiple herbicide mechanisms of action, rotating different modes of action and integrating alternative control options.

The current study aimed to select the strains of lactic acid bacteria (LAB) isolated from forage cactus plants and silage and assess their effects on silage fermentation and aerobic stability. Forty wild isolates from plant and cactus silage, classified as LAB, were evaluated for metabolite production and identified by 16S ribosomal DNA sequencing. These wild isolates were identified as Lactobacillus plantarum, Weissella cibaria, Weissella confusa and Weissella paramesenteroides and the LAB populations differed among the silage. The use of microbial inoculants did not influence gas or effluent losses in forage cactus silage. The silage inoculated with the microbial strain GP15 showed the highest number of LAB populations. The amounts of water-soluble carbohydrates (WSC) and ammonia nitrogen differed among the silage. The silage inoculated with the GP1 strain presented the highest WSC. Populations of enterobacteria and yeasts and moulds were below the minimum detection limit (<2.0 log cfu/g silage) in all the silage studied. The predominant action of inoculants was to maximize dry matter recovery of the silage, which could be the criterion adopted to select the strains of LAB for use as inoculants in Opuntia silage.

Although numerous studies have investigated the individual effects of salinity, irrigation and fertilization on soil microbial communities, relatively less attention has been paid to their combined influences, especially using molecular techniques. Based on the field of orthogonal designed test and deoxyribonucleic acid sequencing technology, the effects of saline water irrigation amount, salinity level of irrigation water and nitrogen (N) fertilizer rate on soil bacterial community structure were investigated. The results showed that the irrigation amount was the most dominant factor in determining the bacterial richness and diversity, followed by the irrigation water salinity and N fertilizer rate. The values of Chao1 estimator, abundance-based coverage estimator and Shannon indices decreased with an increase in irrigation amount while increased and then decreased with an increase in irrigation water salinity and N fertilizer rate. The highest soil bacterial richness and diversity were obtained under the least irrigation amount (25 mm), medium irrigation water salinity (4.75 dS/m) and medium N fertilizer rate (350 kg/ha). However, different bacterial phyla were found to respond distinctively to these three factors: irrigation amount significantly affected the relative abundances of Proteobacteria and Chloroflexi; irrigation water salinity mostly affected the members of Actinobacteria, Gemmatimonadetes and Acidobacteria; and N fertilizer rate mainly influenced the Bacteroidetes' abundance. The results presented here revealed that the assessment of soil microbial processes under combined irrigation and fertilization treatments needed to be more careful as more variable consequences would be established by comparing with the influences based on an individual factor, such as irrigation amount or N fertilizer rate.

Protein turnover is an energy-consuming process that is essential for ensuring the maintenance of living organisms. Gold standard methods for whole-body protein turnover (WBPT) measurement have inherent drawbacks precluding their generalization for large farm animals and use during long periods. Here, we proposed a non-invasive proxy for the WBPT over a long period of time and in a large number of beef cattle. The proxy is based on the rate at which urine-N and plasma proteins are progressively depleted in terms of 15N after a slight decrease in the isotopic N composition of the diet (i.e. diet switch). We aimed to test the ability of this proxy to adequately discriminate the WBPT of 36 growing-fattening young bulls assigned to different dietary treatments known to impact the WBPT rate, with different protein contents (normal v. high) and amino acid profiles (balanced v. unbalanced in methionine). The 15N depletion rate found in plasma proteins represented their fractional synthesis rate, whereas the slow depletion rate found in urine was interpreted as a proxy of the WBPT. The proxy tested in urine suggested different WBPT values between the normal- and high-protein diets but not between the balanced and unbalanced methionine diets. In contrast, the proxy tested in plasma indicated that both dietary conditions affected the fractional synthesis rate of plasma proteins. We considered that the rate at which urine is progressively 15N-depleted following an isotopic diet switch could be proposed as a non-invasive proxy of the WBPT rate in large farm animals.

The objective of this meta-analysis study was to develop and validate equations estimated from in situ and in vitro methods to predict in vivo ruminal digestibility of organic matter (OM) of beef cattle diets. The database was composed of individual data of 23 diets from six experiments. Information collected from these studies was: in vivo digestibility and degradation parameters of OM calculated from in situ and in vitro incubations. The values of estimated times for the in situ and in vitro incubations to access in vivo digestibility of OM, and differences between degradation at 24, 48 and 72 h (in situ and in vitro) and in vivo digestibility were analysed in a model that included the fixed effects of forage neutral detergent fibre level. Thereafter, a multiple stepwise regression was carried out using OM digestibility as a dependent variable and degradation parameters (A = water-soluble fraction; B = potentially degradable water-insoluble fraction; and kd = degradation rate of fraction B) as independent variables. Equation validation was performed using data from a seventh experiment that have the same methods than previous studies. Stepwise regression results showed that the kd contributed significantly in most of the algorithms derived to predict in vivo digestibility. Validation analysis showed that equations developed from both in vitro and in situ incubations accurately estimated the in vivo digestibility of OM (P > 0.05). Our results suggest that equations developed to estimate OM digestibility showed both precision and accuracy; however, in situ method presented better results than in vitro.

Visceral organs play an important role in animals' energy requirements, so their growth must be well understood. The objective of the current study was to fit and compare growth curves that best describe body and visceral organ growth over time in Saanen goats of different sexes. Data were synthesized from seven studies in which curves were fitted to visceral organ growth over time for female, intact male and castrated male Saanen goats from 5 to 45 kg body weight. The liver, pancreas, spleen, rumen–reticulum, omasum, abomasum, small intestine, large intestine and mesenteric adipose tissue (MAT) data were fitted to eight models: simple linear regression, quadratic, monomolecular, Brody, Von Bertalanffy, logistic, Gompertz and Richards. The best-fit model was chosen based on the corrected Akaike information criterion and the concordance correlation coefficient. Model parameters for each sex were compared. Overall, the model that best described visceral organ growth was the logistic model. Sex did not influence the parameters that predicted organ growth (g), except for MAT, where females presented a lower tissue deposition rate and greater inflection point than males. Irrespective of sex, at the beginning of the growth curve, the liver accounted for 28 ± 1.1 g/kg of empty body weight, and the inflection point occurred at 1.7 months. The rumen–reticulum and large intestine presented higher growth rates in the first 2 months of life. Knowledge of the visceral organ growth curve is useful in improving the understanding of the effect of nutritional requirements for goats and must be used to optimize the nutritional plans.

Since behavioural adjustments are an important line of defence against thermal stress, either due to their energy efficiency or to efficiency at preventing overheating, we aimed to evaluate whether broilers fed different maize particle sizes adjusted their behaviour to deal with heat stress challenges. At several times a day, the behaviour of 220 naked neck broilers was evaluated. These broilers were fed with isonutritive diets containing maize with different geometric mean diameters (GMD): 605 and 2280 μm. The thermal environment was monitored during the experiment. Panting and open wings were the only behaviours that showed differences between the times of day (P < 0.05). However, GMD showed a significant effect on feed intake and panting (P < 0.05). The interaction between GMD and time of day was significant only on panting (P < 0.05). Although no daily variation was observed, the highest feed intake was observed in broilers fed the diet containing maize with a GMD of 2280 μm. Less than 5% of the broilers were observed drinking water during the day. Open wings was the behavioural adjustment most used by broilers from 10:00 h, and remained elevated until 14:00 h for both GMDs. The birds panted more when fed the diet containing maize with a GMD of 2280 μm. In conclusion, broilers adjust their behaviour to dissipate excess body heat from the environment and as a result of feed intake. Coarse particles of maize in the diet increase the thermal challenge of broilers since the environment also provides stressful thermal conditions.

The objective of this work was to evaluate the effect of protein reduction, with or without the supplementation of limiting amino acids, on the performance and carcass characteristics of meat quails from 22 to 42 days of age in a thermoneutral environment. A total of 324 European quails were randomly allocated into nine diets. The diets were formulated based on the recommended requirement (control) and were differentiated according to crude protein (CP) reduction levels into moderate reduction (10%) and severe reduction (20%). The diets were supplemented or not with limiting amino acids. The diets with severe and moderate protein reduction meeting the methionine + cystine, lysine and threonine requirements led to weight gain equivalent to that of the control quails. The diet with a moderate reduction in CP, with or without meeting the methionine + cystine requirement or meeting the methionine + cystine and lysine requirement, led to the greatest carcass yield and a greater leg weight and were similar to the control treatment. It is observed that supplementation with the crystalline sources of the amino acids is able to improve the performance of the quails, in addition, the attendance of methionine + cystine requirement important factor when the CP levels are reduced. In our studies, diets with 17.5% CP and supplemented with methionine + cystine, lysine and threonine meet the requirements of quails, thus generating a limiting amino acid requirement, so they are recommended for meat quails from 22 to 42 days old housed in thermoneutral environment.