The agouti (Dasyprocta punctata) meticulously defleshes Astrocaryum standleyanum palm seeds before scatter hoarding. On Barro Colorado Island, Panama, we experimentally tested three hypotheses on how this behaviour could reduce seed predation to the mutual benefit of the tree and the rodent. The first and established hypothesis – that defleshing reduces seed predation by bruchid beetles by intercepting larvae – was rejected. Experiments in which manually defleshed seeds or entire fruits were incubated at different times showed that defleshing reduced bruchid infestation before fruit fall but not after fruit fall. The second hypothesis – that defleshing reduces cache pilferage by making seeds less conspicuous – was supported. An experiment in which intact fruits and manually defleshed seeds were placed in mimicked agouti caches and followed showed that seeds with flesh were pilfered at higher rates than defleshed seeds. The third hypothesis – that defleshing reduces post-dispersal infestation of cached seeds – was rejected. An experiment in which intact fruits and manually defleshed seeds were placed in mammal exclosures and later collected to assess infestation showed that burial reduced seed infestation but defleshing did not. Thus, seed defleshing reduced palm seed predation, but in a different way than previously believed. We also found that (1) bruchid beetles can be pre-dispersal rather than post-dispersal seed predators, (2) seed infestation by scolytid beetles may control bruchid larvae, and (3) scolytids rather than bruchids are the main invertebrate seed predators of this palm.

The wet tropical forests in Madagascar have endemic dung beetles that have radiated for tens of millions of years using a limited range of resources produced by the species-poor mammalian fauna. Beetles were trapped in two wet-forest localities over 4 years (6407 trap nights, 18,869 individuals). More limited data for six other local communities were used to check the generality of the results. Local communities are relatively species poor (around 30 species) in comparison with wet-forest-inhabiting dung beetle communities elsewhere in the tropics (typically 50 or more species). The species belong to only two tribes, Canthonini and Helictopleurina (Oniticellini), which have evolved, exceptionally for dung beetle tribes, completely nocturnal versus diurnal diel activities, respectively. Patterns in the elevational occurrence, body size and resource use suggest that interspecific competition restricts the numbers of locally coexisting species exploiting the limited range of resources that are available. On the other hand, regional turnover in the species composition is exceptionally high due to a large number of species with small geographical ranges, yielding a very large total fauna of dung beetles in Madagascar (>250 species). Apart from exceptionally low local (alpha) diversity and high beta diversity, the Malagasy dung beetle communities are ecologically distinctive from comparable communities in other tropical regions in having high numerical dominance of the most abundant species, small average body size and low degree of resource specialization.

We determined seasonal variation in soil matric potentials (ψsoil) along a topographical gradient and with soil depth in a Bolivian tropical dry (1160 mm y−1 rain) and moist forest (1580 mm y−1). In each forest we analysed the effect of drought on predawn leaf water potentials (ψpd) and drought response (midday leaf water potential at a standardized ψpd of −0.98 MPa; ψmd) of saplings of three tree species, varying in shade-tolerance and leaf phenology. ψsoil changed during the dry season and most extreme in the dry forest. Crests were drier than slopes and valleys. Dry-forest top soil was drier than deep soil in the dry season, the inverse was found in the wet season. In the moist forest the drought-deciduous species, Sweetia fruticosa, occupied dry sites. In the dry forest the short-lived pioneer, Solanum riparium, occupied wet sites and the shade-tolerant species, Acosmium cardenasii drier sites. Moist-forest species had similar drought response. The dry-forest pioneer showed a larger drought response than the other two species. Heterogeneity in soil water availability and interspecific differences in moisture requirements and drought response suggest great potential for niche differentiation. Species may coexist at different topographical locations, by extracting water from different soil layers and/or by doing so at different moments in time.

The potential effect of forest type on the structuring of animal communities in western Amazonia remains poorly understood. In this study, we tested the hypothesis that amphibian species richness, composition and abundance differ across forest types in the lowland rain forest of south-eastern Peru. By using 320 individual transects, we compared the amphibian assemblages across four major forest types (floodplain, terra firme, bamboo and palm swamp) at each of four sites separated by 3.5–105 km. We identified 1967 individuals of 65 species in 11 families and found that a large proportion of the amphibian diversity in this region is attributed to habitat-related beta diversity. Overall, we found that forest type is more important than site in predicting both species composition and abundance. We also found that, when analyses are conducted separately for each forest type and include species abundance data, similarity between assemblages decreases with increasing geographic distance. In contrast to studies that considered species presence/absence but ignored species abundances, our results highlight the importance of including abundance data in the assessment of animal diversity patterns in western Amazonia. We conclude that evaluating community structure across forest types can improve our understanding of diversity patterns in this region.

Disentangling local and historical factors that determine species diversity patterns at multiple spatial scales is fundamental to elucidating processes that govern ecological communities. Here we investigated how environmental correlates may influence diversity at local and regional scales. Primarily utilizing published species lists, amphibian and reptile alpha and beta diversity were assessed at 17 well-surveyed sites distributed among ecoregions throughout Costa Rica. The degree to which regional species diversity patterns were related to environmental variables and geographic distance was determined using Canonical Correspondence Analysis and Mantel tests. Amphibian alpha diversity was highest in lowland Pacific sites (mean = 43.3 species) and lowest at the high elevation site (9 species). Reptile alpha diversity values were high for both lowland Atlantic (mean = 69.5 species) and lowland Pacific (mean = 67 species) sites and lowest for the high elevation site (8 species). We found high species turnover between local sites and ecoregions, demonstrating the importance of beta diversity in the determination of regional diversity. For both amphibians and reptiles, beta diversity was highest between the high-elevation site and all others, and lowest among lowland sites within the same ecoregion. The effect of geographic distance on beta diversity was minor. Ecologically significant climatic variables related to rain, temperature, sunshine and insolation were found to be important determinants of local and regional diversity for both amphibians and reptiles in Costa Rica.

Logged forests form an increasingly large proportion of tropical landscapes but disproportionately few studies have studied the impact of forest disturbance, e.g. lightly vs. heavily logged, on tree and seedling communities simultaneously. We sampled all trees (on 1 ha) and all recently germinated seedlings (on 90 m2) in three lightly and three heavily logged sites in each of the following three East African tropical forests: Budongo Forest and Mabira Forest in Uganda and Kakamega Forest in Kenya. We analysed species richness, diversity, abundance and community composition of late- and early-successional trees and seedlings. We recorded no difference in species richness or diversity of late-successional or early-successional trees between lightly and heavily logged sites. However, the abundance of late-successional species was lower in heavily than lightly logged sites. Moreover, there was no difference in species richness or diversity of trees among the three forests. Yet, abundances of late-successional trees were higher in Budongo Forest than in Mabira Forest and Kakamega Forest. Species richness, diversity and abundance of seedlings did not differ between lightly and heavily logged sites. Only the abundance of seedlings of late-successional species differed among the forests with more individuals in Budongo Forest than in Mabira Forest. This was corroborated by non-metric multidimensional scaling (NMDS) showing clear differences in composition of tree and seedling communities among the three forests. Thus, both, the tree and seedling communities differed significantly among the three forests but not between lightly and heavily logged sites.

Despite the aseasonality of temperature and day length of many tropical regions, especially when compared with temperate latitudes, most tropical animals show fairly pronounced seasonal shifts in foraging, movement patterns and reproduction (Flecker & Feifarek 1994, Saul 1975, Wolda & Fisk 1981). Understanding reproductive seasonality in tropical avian communities involves distinguishing among complex interactions between weather, resource abundance, hormones, behaviour and other life-history traits (Wikelski et al. 2003). While there is a great deal of evidence that many tropical bird species breed seasonally (Hau 2001, Marchant 1959, Miller 1963, Snow & Snow 1964), we still understand little of the causes which drive observed patterns (Wikelski et al. 2003). Most studies which address the seasonality of reproduction in tropical birds have focused on locations with fairly extreme temporal changes in rainfall (Cruz & Andrews 1989, Lack 1950, Marchant 1959, Poulin et al. 1992, Voous 1950), and comparatively few have looked at relatively aseasonal low-latitude locations (Miller 1963, Moreau 1950). Similarly, though a few studies have pointed out slight variation in the within-species initiation of breeding based on microhabitat (Wikelski et al. 2003), we know very little about how micro-habitat choice for nesting may affect (or be affected by) breeding seasonality. In this study I describe the nesting cycle of the spotted barbtail (Premnoplex brunnescens), from the Ecuadorian Andes to better understand how reproduction may be seasonal when climatic cues are subtle or absent.

Trees of the family Dipterocarpaceae dominate the emergent canopy of most lowland rain forests in Asia (Ashton et al. 1988). The family is, therefore, one of the most ecologically important in South-East Asia. Shorea curtisii Dyer ex King is the most common tree species in the hill dipterocarp forests of Peninsular Malaysia (Burgess 1975, Symington 2004), and is considered a key species for the dynamics of such forests. Currently, most Malaysian hill forests are selectively logged. Trees over 50 cm dbh are harvested, and any subsequent harvests depend on the remaining smaller trees. Such selective logging takes no account of seedling regeneration. Hence, subsequent timber harvests rely on trees derived from the seedlings that are already present and future seeds produced by the residual trees (Appanah & Mohd. Rasol 1994). Existing seedlings of S. curtisii in the forest, therefore, play a significant role in the dynamics of the hill forest. However, the conditions that constitute a suitable habitat for S. curtisii seedling establishment and survival remain unknown.

Thousands of plant species throughout tropical and temperate zones secrete extrafloral nectar (EFN) (see www.biosci.unl.edu/emeriti/keeler/extrafloral/worldlistfamilies.htm) to attract ants, whose presence leads to an indirect defence against herbivores (Chamberlain & Holland 2009, Heil 2008, Heil & McKey 2003, Rico-Gray & Oliveira 2007). Although termed ‘extrafloral’ because the nectar is not involved in pollination, EFN can also be secreted within the inflorescences (Bentley 1977, Holland et al. 2010, Martins 2009). Because ants tend to defend reliable food sources against all types of putative competitors, it has been hypothesized that the presence of extrafloral nectaries close to flowers may lead to competition among ants and pollinators, or even to direct ant–pollinator conflicts. Such antagonistic interactions would reduce the access of pollinators to flowers and, thereby, may cause significant ‘ecological costs’ of indirect, ant-mediated defences (Heil 2002).

In tropical climates, nest movements by mature ant colonies are probably widespread but the phenomenon of nest relocation is poorly described (McGlynn 2007, McGlynn et al. 2004, Smallwood 1982a). For species that nest in soil, the costs and risks associated with excavating and establishing new nests are consequential, and it is assumed that relocation occurs when the costs are offset by a more advantageous nest location (Avargues-Weber & Monnin 2009, Banschbach & Herbers 1999). Nest movements may occur to areas with greater availability of food resources or to a more favourable microclimate. Here we provide the first report of nest relocation in one of the most widespread and well described ant species in the Neotropics, Ectatomma ruidum (Roger), and we perform a manipulative experiment to test whether food availability or light environment influence nest movement.