Hostname: page-component-78c5997874-dh8gc Total loading time: 0 Render date: 2024-11-10T22:48:21.188Z Has data issue: false hasContentIssue false

Heterologous Hybridization of Cotton Microarrays with Velvetleaf (Abutilon theophrasti) Reveals Physiological Responses Due to Corn Competition

Published online by Cambridge University Press:  20 January 2017

David P. Horvath*
Affiliation:
Bioscience Research Laboratory, U.S. Department of Agriculture, Agricultural Research Service, Fargo, ND 58105-5674
Danny Llewellyn
Affiliation:
CSIRO Plant Industry, Canberra City ACT 2601, Australia
Sharon A. Clay
Affiliation:
Department of Plant Science, South Dakota State University, Brookings SD 57007
*
Corresponding author's E-mail: [email protected]

Abstract

Microarray analysis was used to identify changes in gene expression in velvetleaf that result from competition with corn. The plants were grown in field plots under adequate N (addition of 220 kg N ha−1) to minimize stress and sampled at the V6 growth stage of corn (late June). Leaf area, dry weight, and N and P concentration were similar in velvetleaf plants grown alone or with corn. Competition, however, did influence velvetleaf gene expression. Genes involved in carbon utilization, photosynthesis, red light signaling, and cell division were preferentially expressed when velvetleaf was grown in competition with corn. A less clear picture of the physiological impact of growth in monoculture was provided by the data. However, several genes involved in secondary metabolism and a gene preferentially expressed in response to phosphate availability were induced. No differences were observed in genes responsive to water stress or sequestering/transporting micronutrients.

Type
Physiology, Chemistry, and Biochemistry
Copyright
Copyright © Weed Science Society of America 

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

Literature Cited

Aubert, D., Chevillard, M. C., Dorne, A. M., Arlaud, G., and Herzog, M. 1998. Expression patterns of GASA genes in Arabidopsis thaliana: the GASA4 gene is up-regulated by gibberellin in meristematic regions. Plant Mol. Biol. 36:871883.CrossRefGoogle ScholarPubMed
Ballaré, C. L. and Casal, J. J. 2000. Light signals perceived by crop and weed plants. Field Crops Res. 67:149160.CrossRefGoogle Scholar
Basu, C., Halfhill, M. D., Mueller, T. C., and Stewart, C. N. Jr. 2004. Weed genomics: new tools to understand weed biology. Trends Plant Sci. 9:391398.CrossRefGoogle ScholarPubMed
Bryson, C. T. 1990. Interference and critical time of removal of hemp sesbania (Sesbania exaltata) in cotton (Gossypium hirsutum). Weed Technol. 4:833837.CrossRefGoogle Scholar
Chang, S., Puryear, J., and Cairney, J. 1993. A simple and efficient method for isolating RNA from pine trees. Plant Mol. Biol. Rep. 11:113116.CrossRefGoogle Scholar
Chao, W. S., Horvath, D. P., Anderson, J. V., and Foley, M. F. 2005. Potential model weeds to study genomics, ecology, and physiology in the 21st century. Weed Sci. 53:929937.CrossRefGoogle Scholar
Churchill, G. A. 2002. Fundamentals of experimental design for cDNA microarrays. Nat. Genet. 32:Suppl. 490–495.CrossRefGoogle ScholarPubMed
Hall, M. R., Swanton, C. J., and Anderson, G. W. 1992. The critical period of weed control in grain corn (Zea mays). Weed Sci. 40:441447.CrossRefGoogle Scholar
Horvath, D. P., Gulden, R., and Clay, S. A. 2006. Microarray analysis of late-season velvetleaf (Abutilon theophrasti) impact on corn. Weed Sci. 54:983994.CrossRefGoogle Scholar
Horvath, D. P., Schaffer, R., West, M., and Wisman, E. 2003a. Arabidopsis microarrays identify conserved and differentially-expressed genes involved in shoot growth and development from distantly related plant species. Plant J. 34:125134.CrossRefGoogle ScholarPubMed
Horvath, D. P., Schaffer, R., and Wisman, E. 2003b. Identification of genes induced in emerging tillers of wild oat (Avena fatua) using Arabidopsis microarrays. Weed Sci. 51:503508.CrossRefGoogle Scholar
Lindquist, J. L. 2001. Performance of INTERCOM for predicting corn–velvetleaf interference across north-central United States. Weed Sci. 49:195202.CrossRefGoogle Scholar
McDonald, A. J., Riha, S. J., and Mohlerl, C. L. 2004. Mining the record: historical evidence for climatic influences on maize–Abutilon theophrasti competition. Weed Res. 44:439445.CrossRefGoogle Scholar
Mitich, L. W. 1991. Intriguing world of weeds–velvetleaf. Weed Technol. 5:253255.CrossRefGoogle Scholar
Norsworthy, J. K. and Oliveira, M. J. 2004. Comparison of the critical period for weed control in wide- and narrow-row corn. Weed Sci. 52:802807.CrossRefGoogle Scholar
Nurse, R. E. and DiTommaso, A. 2005. Corn competition alters the germinability of velvetleaf (Abutilon theophrasti) seeds. Weed Sci. 53:479488.CrossRefGoogle Scholar
Rajcan, I., Chandler, K. J., and Swanton, C. J. 2004. Red-far-red ratio of reflected light: a hypothesis of why early-season weed control is important in corn. Weed Sci. 52:774778.CrossRefGoogle Scholar
Rensink, W. A., Lee, Y., Liu, J., Iobst, S., Ouyang, S., and Buell, C. R. 2005. Comparative analyses of six solanaceous transcriptomes reveal a high degree of sequence conservation and species-specific transcripts. BMC Genomics. 6:124138.CrossRefGoogle ScholarPubMed
Reyes, J. C., Hennig, L., and Gruissem, W. 2002. Chromatin-remodeling and memory factors. New regulators of plant development. Plant Physiol. 130:10901101.CrossRefGoogle ScholarPubMed
Roggenkamp, G. J., Mason, S. C., and Martin, A. R. 2000. Velvetleaf (Abutilon theophrasti) and green foxtail (Setaria viridis) response to corn (Zea mays) hybrid. Weed Technol. 14:304311.CrossRefGoogle Scholar
Sakai, H., Hua, J., Chen, Q. G., Chang, C., Medrano, L. J., Bleecker, A. B., and Meyerowitz, E. M. 1998. ETR2 is an ETR1-like gene involved in ethylene signaling in arabidopsis. Proc. Nat. Acad. Sci. U. S. A. 95:58125817.CrossRefGoogle ScholarPubMed
Sattin, M., Zanin, G., and Berti, A. 1992. Case study for weed competition/population ecology: velvetleaf (Abutilon theophrasti) in corn (Zea mays). Weed Technol. 6:213219.CrossRefGoogle Scholar
Smith, H. and Whitelam, G. C. 1997. The shade avoidance syndrome: multiple responses mediated by multiple phytochromes. Plant Cell Environ. 20:840844.CrossRefGoogle Scholar
Solano, R., Stepanova, A., Chao, Q., and Ecker, J. R. 1998. Nuclear events in ethylene signalling: a transcriptional cascade mediated by ethylene-insensitive3 and ethylene-response-factor1. Genes Dev. 12:37033714.CrossRefGoogle ScholarPubMed
Spencer, N. R. 1984. Velvetleaf, Abutilon theophrasti (Malvaceae), history and economic impact in the United States. Econ. Bot. 38:407416.CrossRefGoogle Scholar
Steinmaus, S. J. and Norris, R. F. 2001. Growth analysis and canopy architecture of velvetleaf grown under light conditions representative of irrigated Mediterranean-type agroecosystems. Weed Sci. 50:4253.CrossRefGoogle Scholar
Sultan, H. B., Hamilton, R. I., Dwyer, L. M., Stewart, D. W., Cloutier, D., Assemat, L., Foroutan-Pour, K., and Smith, D. L. 2001. Weed biomass production response to plant spacing and corn (Zea mays) hybrids differing in canopy architecture. Weed Technol. 15:647653.Google Scholar
Teasdale, J. R. 1995. Influence of narrow row/high population corn (Zea mays) on weed control and light transmittance. Weed Technol. 9:113118.CrossRefGoogle Scholar
Van Acker, R. C., Swanton, C. J., and Weise, S. F. 1993. The critical period of weed control in soybean [Glycine max (L.) Merr]. Weed Sci. 41:194200.CrossRefGoogle Scholar
Vandenbussche, F., Vriezen, W. H., Smalle, J., Laarhoven, L. J. J., Harren, F. J. M., and Van Der Straeten, D. 2003. Ethylene and auxin control the Arabidopsis response to decreased light intensity. Plant Physiol. 133:517527.CrossRefGoogle ScholarPubMed
Warwick, S. I. and Black, L. D. 1988. The biology of Canadian weeds. 90. Abutilon theophrasti . Can. J. Plant Sci. 68:10691985.CrossRefGoogle Scholar
Weinig, C. 2000. Differing selection in alternative competitive environments: shade-avoidance responses and germination timing. Evolution. 54:124136.Google ScholarPubMed
Zimmermann, P., Hirsch-Hoffmann, M., Hennig, L., and Gruissem, W. 2004. GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. Plant Physiol. 136:26212632.CrossRefGoogle ScholarPubMed