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Rhizocarpon smaragdulum, a new monosporic yellow-thalline species and some additional species of the genus Rhizocarpon from the Altai Mountains (Siberia)

Published online by Cambridge University Press:  19 September 2017

Evgeny A. DAVYDOV  and
Lidia S. YAKOVCHENKO
Evgeny A. DAVYDOV
Affiliation:
Altai State University - Herbarium (ALTB), Lenin Prosp. 61, Barnaul 656049, Russian Federation; Tigirek State Nature Reserve, Nikitina Str. 111, Barnaul 656043, Russian Federation. Email: [email protected]
Lidia S. YAKOVCHENKO
Affiliation:
Federal Scientific Center of the East Asia Terrestrial Biodiversity FEB RAS, Vladivostok 690022, Russian Federation
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Abstract

Rhizocarpon smaragdulum Davydov & Yakovchenko sp. nov. is described and a phylogenetic analysis (ITS, mtSSU) is presented, confirming its distinctiveness and indicating a sister relationship with R. suomiense and R. subgeminatum. The species is unique among yellow Rhizocarpon species in having a single hyaline ascospore per ascus. The phylogenetic tree suggests that the number of ascospores per ascus has been reduced in Rhizocarpon more than once during the course of its evolution. Two new distributional records are also reported: Rhizocarpon atroflavescens is new for Siberia and R. norvegicum is new for the Altai Mountains. Rhizocarpon norvegicum in this region grows on rocks and is also lichenicolous on Acarospora bullata.

Keywords

AscomycotaAsialichenized funginew taxontaxonomyRhizocarpaceaeTuva
Type
Articles
Information
The Lichenologist , Volume 49 , Issue 5 , September 2017 , pp. 457 - 466
Copyright
© British Lichen Society, 2017 

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References

Culberson, C. F. & Kristinsson, H. D. (1970) A standardized method for the identification of lichen products. Journal of Chromatography 46: 85–93.Google Scholar
Davydov, E. A. & Printzen, C. (2012) Rare and noteworthy boreal lichens from the Altai Mountains (South Siberia, Russia). Bryologist 115: 61–73.Google Scholar
Davydov, E. A., Peršoh, D. & Rambold, G. (2010) The systematic position of Lasallia caroliniana (Tuck.) Davydov, Peršoh & Rambold comb. nova and considerations on the generic concept of Lasallia (Umbilicariaceae, Ascomycota). Mycological Progress 9: 261–266.Google Scholar
Davydov, E. A., Konoreva, L. A., Andreev, M. P., Zhdanov, I. S. & Dobrysh, A. A. (2012) Additions to the lichen biota of Altai Mountains. IV. Turczaninowia 15 (3): 23–36.Google Scholar
Dobrysh, A. A. (2000) Lichens. In Bryophytes and Lichens of the Nature Reserve “Wrangel Island” (annotated list of species). Flora i fauna Zapovednikov Vol. 88 (T. M. Korneeva, ed.): 47–67. Moscow. [In Russian]Google Scholar
Dobrysh, A. A. (2003) Rhizocarpaceae . In Handbook of the Lichens of Russia 8 (N. S. Golubkova, ed.):198–238. St. Petersburg: Nauka [in Russian].Google Scholar
Fadeeva, M. A., Golubkova, N. S., Vitikainen, O. & Ahti, T. (2007) Conspectus of Lichens and Lichenicolous Fungi of the Republic of Karelia. Petrozavodsk: Karelian Research Centre, Russian Academy of Science [In Russian].Google Scholar
Feuerer, T. (1991) Revision der europäischen Arten der Flechtengattung Rhizocarpon mit nichtgelbem Lager und veilzelligen Sporen. Bibliotheca Lichenologica 39: 1–218.Google Scholar
Fletcher, A., Gilbert, O. L., Clayden, S. & Fryday, A. M. (2009) Rhizocarpon . In The Lichens of Great Britain and Ireland (C. W. Smith, A. Aptroot, B. J. Coppins, A. Fletcher, O. L. Gilbert, P. W. James & P. A. Wolseley, eds): 792–808. London: British Lichen Society.Google Scholar
Gardes, M. & Bruns, T. D. (1993) ITS primers with enhanced specificity for basidiomycetes – application to the identification of mycorrhizae and rusts. Molecular Ecology 2: 113–118.Google Scholar
Hansen, E. S. (2002) Lichens from Ammassalik Ø, Southeast Greenland. Folia Cryptogamica Estonica 39: 3–12.Google Scholar
Hawksworth, D. L., Kirk, P. M., Sutton, B. C. & Pegler, D. N. (1995) Ainsworth & Bisby’s Dictionary of the Fungi. 8th edition. Wallingford: CAB International.Google Scholar
Hermansson, J., Pystina, T. N., Owe-Larsson, B. & Zhurbenko, M. P. (2006) Lichens and lichenicolous fungi of the Pechoro-Ilychskiy Nature Reserve. Flora i Fauna Zapovednikov 109: 1–79 [In Russian].Google Scholar
Holtan-Hartwig, J. & Timdal, E. (1987) Notes on some parasitic Rhizocarpon species. Lichenologist 19: 335–338.Google Scholar
Ihlen, P. G. (2004) Taxonomy of the non-yellow species of Rhizocarpon (Rhizocarpaceae, lichenized Ascomycota) in the Nordic countries, with hyaline and muriform ascospores. Mycological Research 108: 533–570.Google Scholar
Ihlen, P. G. & Ekman, S. (2002) Outline of phylogeny and character evolution in Rhizocarpon (Rhizocarpaceae, lichenized Ascomycota) based on nuclear ITS and mitochondrial SSU ribosomal DNA sequences. Biological Journal of the Linnean Society 77: 535–546.Google Scholar
Lanfear, R., Calcott, B., Ho, S. Y. W. & Guindon, S. (2012) PartitionFinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses. Molecular Biology and Evolution 29: 1695–1701.Google Scholar
Larget, B. & Shimon, D. (1999) Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees. Molecular Biology and Evolution 16: 750–759.Google Scholar
MacDonald, A. M., Lundholm, J. T. & Clayden, S. R. (2011) Saxicolous lichens on a Nova Scotian coastal barren. Northeastern Naturalist 18: 475–488.Google Scholar
McCune, B., Timdal, E. & Bendiksby, M. (2016) Rhizocarpon quinonum, a new anthraquinone-containing species from the Alaska Peninsula. Lichenologist 48: 367–375.CrossRefGoogle Scholar
Meyer, B. & Printzen, C. (2000) Proposal for a standardized nomenclature and characterization of insoluble lichen pigments. Lichenologist 32: 571–583.Google Scholar
Miadlikowska, J., Kauff, F., Högnabba, F., Oliver, J. C., Molnár, K., Fraker, E., Gaya, E., Hafellner, J., Hofstetter, V., Gueidan, C., et al. (2014) A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families. Molecular Phylogenetics and Evolution 79: 132–168.Google Scholar
Otte, V. (2007) Flechten, lichenicole Pilze und Moose aus dem Nordwest-Kaukasus – zweiter Nachtrag. Herzogia 20: 221–237.Google Scholar
Poelt, J. (1990) Parasitische Arten der Flechtengattung Rhizocarpon: eine weitere Übersicht. Mitteilungen der Botanische Staatssammlung München 29: 515–538.Google Scholar
Poelt, J. & Hafellner, J. (1982) Rhizocarpon vorax spec. nov. (Lichenes) und seine Baetegenossen auf Pertusaria . Herzogia 6: 309–321.Google Scholar
Poelt, J. & Vězda, A. (1984) Rhizocarpon inimicum spec. nov. eine weitere parasitische Flechte auf Lecanora rupicola spec. coll. Herzogia 6: 469–475.Google Scholar
Rambold, G. & Triebel, D. (1992) The inter-lecanoralean associations. Bibliotheca Lichenologica 48: 1–201.Google Scholar
Rambold, G., Meier, C. & Thamerus, M. (1998) A comparative study on structure and functionality of asci in species of Rhizocarpon (Lecanorales, Ascomycetes). Cryptogamie, Bryologie-Lichénologie 19: 247–255.Google Scholar
Räsänen, V. (1949) Preliminary studies on the yellow species of Rhizocarpon . Kuopion Luonnon Ystavain Yhdistyksen julkaisuja 2B (4): 1–24.Google Scholar
Ronquist, R., Teslenko, M., van der Mark, P., Ayres, D. L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M. A. & Huelsenbeck, J. P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539–542.Google Scholar
Runemark, H. (1956 a) Studies in Rhizocarpon. I. Taxonomy of the yellow species in Europe. Opera Botanica 2 (1): 1–152.Google Scholar
Runemark, H. (1956 b) Studies in Rhizocarpon. II. Distribution and ecology of the yellow species in Europe. Opera Botanica 2 (2): 1–150.Google Scholar
Santesson, R. (1993) The Lichens and Lichenicolous Fungi of Sweden and Norway. Lund: SBT-förlaget.Google Scholar
Silvestro, D. & Michalak, I. (2012) RaxmlGUI: a graphical front-end for RAxML. Organisms Diversity and Evolution 12: 335–337.Google Scholar
Stamatakis, A. (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312–1313.Google Scholar
Timdal, E. & Holtan-Hartwig, J. (1988) A preliminary key to Rhizocarpon in Scandinavia. Graphis Scripta 2: 41–54.Google Scholar
Urbanavichus, G. P. (2010) A Checklist of the Lichen Flora of Russia. St. Petersburg: Nauka [in Russian].Google Scholar
Urbanavichus, G. P., Ahti, T. & Urbanavichene, I. N. (2008) Catalogue of lichens and allied fungi of Murmansk Region, Russia. Norrlinia 17: 1–80.Google Scholar
Urbanavichus, G. P., Lavrinenko, O. V. & Urbanavichene, I. N. (2009) The lichens of Dolgii and adjacent islands in the Barents Sea. Botanicheskii Zhurnal (St . Petersburg) 94: 656–675 [in Russian].Google Scholar
Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238–4246.Google Scholar
White, T. J., Bruns, T. D., Lee, S. B. & Taylor, J. W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods and Applications (M. A. Innis, D. H. Gelfand, J. J. Sninsky & T. J. White, eds): 315–322. San Diego: Academic Press.Google Scholar
Wirth, V., Hauck, M. & Schultz, M. (2013) Die Flechten Deutschlands, Band 1 und 2. Stuttgart: E. Ulmer.Google Scholar
Zhou, S. & Stanosz, G. R. (2001) Primers for amplification of mtSSU rDNA, and a phylogenetic study of Botryosphaeria and associated anamorphic fungi. Mycological Research 105: 1033–1044.Google Scholar
Zoller, S., Scheidegger, C. & Sperisen, C. (1999) PCR primers for the amplification of mitochondrial small subunit ribosomal DNA of lichen-forming ascomycetes. Lichenologist 31: 511–516.Google Scholar