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Bacidina mendax sp. nov., a new widespread species in Central Europe, together with a new combination within the genus Bacidina

Published online by Cambridge University Press:  26 January 2018

Paweł CZARNOTA  and
Beata GUZOW-KRZEMIŃSKA
Paweł CZARNOTA
Affiliation:
Department of Agroecology, Faculty of Biology and Agriculture, University of Rzeszów, Ćwiklińskiej 1a, PL-35-601 Rzeszów, Poland. Email: [email protected]
Beata GUZOW-KRZEMIŃSKA
Affiliation:
Department of Molecular Biology, Faculty of Biology, University of Gdańsk, Wita Stwosza 59, PL-80-308 Gdańsk, Poland. Currently at: Department of Plant Taxonomy and Nature Conservation, Faculty of Biology, University of Gdańsk, Wita Stwosza 59, PL-80-308 Gdańsk, Poland
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Abstract

Bacidina mendax, described here as a new lichen species, appears to be common and widespread, at least in Central Europe. Analyses of the ITS rDNA region and the morphology of specimens showed an intraspecific variation in the new taxon. It differs from B. neosquamulosa in the lack of a subsquamulose thallus, and from B. caligans in its longer and only slightly curved to apically hooked conidia and lack of a granular (sorediate) thallus. Since ITS rDNA data support the inclusion of Bacidia pycnidiata Czarnota & Coppins in the genus Bacidina, a new combination is proposed.

Keywords

AscomycotaITS rDNAlichen taxonomylichenized fungimolecular phylogeny
Type
Articles
Information
The Lichenologist , Volume 50 , Issue 1 , January 2018 , pp. 43 - 57
Copyright
© British Lichen Society, 2018 

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References

Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. (1990) Basic local alignment search tool. Journal of Molecular Biology 215: 403–410.Google Scholar
Cáceres, M. E. S. (2007) Corticolous crustose and microfoliose lichens of northeastern Brazil. Libri Botanici 22: 1–168.Google Scholar
Castresana, J. (2000) Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular Biology and Evolution 17: 540–552.Google Scholar
Coppins, B. J. & Aptroot, A. (2009) Bacidia De Not. (1846). In The Lichens of Great Britain and Ireland (C. W. Smith, A. Aptroot, B. J. Coppins, A. Fletcher, O. L. Gilbert, P. W. James & P. A. Wolseley, eds): 189–207. London: British Lichen Society.Google Scholar
Czarnota, P. (2016) Contribution to the knowledge of some poorly known lichens in Poland IV. Bacidia fuscoviridis and Bacidina brandii . Acta Mycologica 51 (1): 1–7.CrossRefGoogle Scholar
Czarnota, P. & Guzow-Krzemińska, B. (2012) ITS rDNA data confirm a delimitation of Bacidina arnoldiana and B. sulphurella and support a description of a new species within the genus Bacidina . Lichenologist 44: 743–755.Google Scholar
Dereeper, A., Guignon, V., Blanc, G., Audic, S., Buffet, S., Chevenet, F., Dufayard, J.-F., Guindon, S., Lefort, V., Lescot, M. et al. (2008) Phylogeny.fr: robust phylogenetic analysis for the non-specialist. Nucleic Acids Research 36 (Web Server issue): W465–9.Google Scholar
Ekman, S. (1996 a) The corticolous and lignicolous species of Bacidia and Bacidina in North America. Opera Botanica 127: 1–148.Google Scholar
Ekman, S. (1996 b) Proposal to conserve the name Bacidina against Lichingoldia and Woesia (lichenized Ascomycotina). Taxon 45: 687–688.CrossRefGoogle Scholar
Ekman, S. (2001) Molecular phylogeny of the Bacidiaceae (Lecanorales, lichenized Ascomycota). Mycological Research 105: 783–797.Google Scholar
Ekman, S. (2004) Bacidina . In Lichen Flora of the Greater Sonoran Desert Region, Vol. 2. (T. H. Nash III, B. D. Ryan, P. Diederich, C. Gries & F. Bungartz, eds): 28–32. Tempe, Arizona: Lichens Unlimited, Arizona State University.Google Scholar
Farkas, E. (2015) Names of Bacidia s. l. in current use for foliicolous lichens–an annotated nomenclatural study. Acta Botanica Hungarica 57: 51–70.Google Scholar
Farkas, E. & Vězda, A. (1993) Five new foliicolous lichen species. Folia Geobotanica et Phytotaxonomica 28: 321–330.Google Scholar
Felsenstein, J. (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783–791.CrossRefGoogle ScholarPubMed
Gardes, M. & Bruns, T. D. (1993) ITS primers with enhanced specificity for basidiomycetes – application to the identification of mycorrhizae and rusts. Molecular Ecology 2: 113–118.Google Scholar
Guzow-Krzemińska, B. & Węgrzyn, G. (2000) Potential use of restriction analysis of PCR-amplified DNA fragments in taxonomy of lichens. Mycotaxon 76: 305–313.Google Scholar
Hauck, M. & Wirth, V. (2010) New combinations in Bacidina . Herzogia 23: 15–17.Google Scholar
Huelsenbeck, J. P. & Ronquist, F. (2001) MRBAYES: Bayesian inference of phylogeny. Bioinformatics 17: 754–755.CrossRefGoogle Scholar
Katoh, K., Misawa, K., Kuma, K. & Miyata, T. (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30: 3059–3066.Google Scholar
Miller, M. A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In Proceedings of the Gateway Computing Environments Workshop (GCE), 14 November 2010, New Orleans, Louisiana, pp. 1–8.Google Scholar
Nylander, J. A. A. (2004) MrModeltest 2.0. Program distributed by the author. Uppsala: Evolutionary Biology Centre, Uppsala University.Google Scholar
Orange, A., James, P. W. & White, F. J. (2001) Microchemical Methods for the Identification of Lichens. London: British Lichen Society.Google Scholar
Ronquist, F. & Huelsenbeck, J. P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572–1574.Google Scholar
Spribille, T., Björk, C. R., Ekman, S., Elix, J. A., Goward, T., Printzen, C., Tønsberg, T. & Wheeler, T. (2009) Contributions to an epiphytic lichen flora of northwest North America: I. Eight new species from British Columbia inland rain forest. Bryologist 112: 109–137.CrossRefGoogle Scholar
Stamatakis, A. (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312–1313.Google Scholar
Swofford, D. L. (2001) PAUP*: Phylogenetic Analysis Using Parsimony (and Other Methods). Version 4. Sunderland, Massachusetts: Sinauer Associates.Google Scholar
van den Boom, P. P. G. & Sipman, H. J. M. (2014) New or interesting lichen records from Guatemala II. Six new species and records of 80 further taxa. Sydowia 66: 143–168.Google Scholar
Vězda, A. (1990) Bacidina genus novum familiae Lecideaceae s. lat. (Ascomycetes lichenisati). Folia Geobotanica et Phytotaxonomica 25: 431–432.Google Scholar
White, T. J., Bruns, T., Lee, S. & Taylor, J. W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods and Applications (M. A. Innes, D. H. Gelfand, J. J. Sninsky & T. J. White, eds): 315–322. New York: Academic Press.Google Scholar
Wirth, V. (1994) Checkliste der Flechten und flechtenbewohnenden Pilze Deutschlands – eine Arbeitshilfe. Stuttgarter Beiträge zur Naturkunde, Serie A 517: 1–63.Google Scholar
Wirth, V., Hauck, M. & Schultz, M. (2013) Die Flechten Deutschlands. Stuttgart: Ver. Eugen Ulmer.Google Scholar