Ecological classification of coastal waters has become increasingly important as one of the basic issues in the biology of conservation. Management and protection of coastal areas take place at different spatial scales. Thus, proper classification schemes should integrate equivalent information at various levels of definition in order to show its feasibility as a useful tool for assessment of coastal environments at the required scales. In this work, a global approach applied to the classification of the NE Atlantic coast is analysed in order to discuss pros and cons regarding different conceptual and technical issues for effective implementation of such a management tool. Using the hierarchical system applied at three different geographic scales: Biogeographic (NE Atlantic coast), Regional (Bay of Biscay) and Local (Cantabria region), five different topics were considered for debating strengths and weaknesses of the methodological alternatives at those spatial scales, using for validation the rocky shore macroalgae as a representative biological element of benthic communities. These included: (i) the spatial scales; (ii) the physical variables and indicators; (iii) the classification methodologies; (iv) the biological information; and (v) the validation procedure. Based on that analysis, the hierarchical support system summarized in this paper provides a management framework for classification of coastal systems at the most appropriate resolution, applicable to a wide range of coastal areas. Further applications of the physical classification for management of biodiversity in different environmental scenarios are also analysed.

Quantifying exchange of particulate matter between coastal and open waters is an important and often unresolved issue. Here, we apply phytoplankton order richness as an innovative marine tracer to identify the geographic position of a coastal exchange zone in the SE North Sea, including its variability in time and space. Previous observations on dynamics of suspended particulate matter accumulation resulted in a hypothesized boundary between coastal waters (including the Wadden Sea) and open North Sea waters, the so-called ‘line-of-no-return’. Our study along two transects (Terschelling, Noordwijk) in the Dutch coastal zone showed seasonality patterns in phytoplankton order richness, both for diatoms and flagellates. The coastal Wadden Sea was found to be clearly different from the open North Sea, implying that seasonality in Wadden Sea phytoplankton is at least partly driven by local environmental conditions. Seasonality in flagellates was found to be more uniform than seasonality in diatoms. Stations in the coastal North Sea to a distance of 10 km (Terschelling) to 20 km (Noordwijk) from the shore appeared to be at the inside of the ‘line-of-no-return’. Our findings indicate that this approach is a useful aid in exploring mixing of particulate matter between coastal and open waters and to study the responses of phytoplankton communities to environmental drivers.

The genus Prymnesium includes several species that produce toxins with cytotoxic, ichthyotoxic, neurotoxic and haemolytic activity. Bloom episodes of Prymnesium species have been reported from several parts of the world (North America, Europe, Africa, Asia and Australia), especially from temperate and subtropical regions and most of them from brackish waters. Blooms cause great economic losses to aquaculture and fisheries around the world. The ichthyotoxic and allelopathic effects of Prymnesium have been linked to the presence of Haemolysin 1, Prymnesins 1 and 2 and, more recently, fatty acids and fatty acid amides. The toxicology of this genus with regard to different growth conditions such as light, nutrients and other parameters has been well documented. It is unknown, however, whether different species and strains from the Prymnesium genus all produce the same types and level of toxins. In this study, we have determined the haemolytic activity of eight different strains from the genus Prymnesium in both exponential and stationary phases of growth. We have also evaluated the efficiency of the extraction solvent.

Bivalve populations display fluctuating densities resulting in different interactions among them and with their environment. Using the edible cockle (Cerastoderma edule) as a model, we investigated two alternative hypotheses concerning the effect of density on individual infection intensity by trematode parasites. Considering that these parasites infect cockles through filtration activity, our first hypothesis was that high host density will have a dilution effect so that infection intensity decreases with host density. Conversely, high cockle density could attract other hosts used by these trematode parasites to complete their life cycle. A 17-year monthly survey of a cockle population in Arcachon Bay, France, showed a negative correlation between the cockle density and the abundance of parasite larvae in juvenile cockles with a significant threshold when adult cockle density reached 400 ind. m−2. This result was confirmed for the four dominating trematode parasites, independently considered. Additionally, a field experiment was performed during 9 months, with cockles maintained in enclosures with two densities (200 and 800 ind. m−2). Individual cockle mean infection was 1.5 times higher at low cockle density, mainly due to one dominant trematode species (Parvatrema minutum). In conclusion and confirming the first advanced hypothesis, for certain environments, negative consequences of bivalve intraspecific competition at high density can be mitigated by lower parasite pressure.

Within the COST action EMBOS (European Marine Biodiversity Observatory System) the degree and variation of the diversity and densities of soft-bottom communities from the lower intertidal or the shallow subtidal was measured at 28 marine sites along the European coastline (Baltic, Atlantic, Mediterranean) using jointly agreed and harmonized protocols, tools and indicators. The hypothesis tested was that the diversity for all taxonomic groups would decrease with increasing latitude. The EMBOS system delivered accurate and comparable data on the diversity and densities of the soft sediment macrozoobenthic community over a large-scale gradient along the European coastline. In contrast to general biogeographic theory, species diversity showed no linear relationship with latitude, yet a bell-shaped relation was found. The diversity and densities of benthos were mostly positively correlated with environmental factors such as temperature, salinity, mud and organic matter content in sediment, or wave height, and related with location characteristics such as system type (lagoons, estuaries, open coast) or stratum (intertidal, subtidal). For some relationships, a maximum (e.g. temperature from 15–20°C; mud content of sediment around 40%) or bimodal curve (e.g. salinity) was found. In lagoons the densities were twice higher than in other locations, and at open coasts the diversity was much lower than in other locations. We conclude that latitudinal trends and regional differences in diversity and densities are strongly influenced by, i.e. merely the result of, particular sets and ranges of environmental factors and location characteristics specific to certain areas, such as the Baltic, with typical salinity clines (favouring insects) and the Mediterranean, with higher temperatures (favouring crustaceans). Therefore, eventual trends with latitude are primarily indirect and so can be overcome by local variation of environmental factors.

Coastal ecosystems are highly complex and driven by multiple environmental factors. To date we lack scientific evidence for the relative contribution of natural and anthropogenic drivers for the majority of marine habitats in order to adequately assess the role of different stressors across the European seas. Such relationship can be investigated by analysing the correlation between environmental variables and biotic patterns in multivariate space and taking into account non-linearities. Within the framework of the EMBOS (European Marine Biodiversity Observatory System) programme, hard bottom intertidal communities were sampled in a standardized way across European seas. Links between key natural and anthropogenic drivers and hard bottom communities were analysed using Boosted Regression Trees modelling. The study identified strong interregional variability and showed that patterns of hard bottom macroalgal and invertebrate communities were primarily a function of tidal regime, nutrient loading and water temperature (anomalies). The strength and shape of functional form relationships varied widely however among types of organisms (understorey algae composing mostly filamentous species, canopy-forming algae or sessile invertebrates) and aggregated community variables (cover or richness). Tidal regime significantly modulated the effect of nutrient load on the cover and richness of understorey algae and sessile invertebrates. In contrast, hydroclimate was more important for canopy algae and temperature anomalies and hydroclimate separately or interactively contributed to the observed patterns. The analyses also suggested that climate-induced shifts in weather patterns may result in the loss of algal richness and thereby in the loss of functional diversity in European hard bottom intertidal areas.

Examining how variability in population abundance and distribution is allotted among different spatial scales can inform of processes that are likely to generate that variability. Results of studies dealing with scale issues in marine benthic communities suggest that variability is concentrated at small spatial scales (from tens of centimetres to few metres) and that spatial patterns of variation are consistent across ecosystems characterized by contrasting physical and biotic conditions, but this has not been formally tested. Here we quantified the variability in the distribution of intertidal rocky shore communities at a range of spatial scales, from tens of centimetres to thousands of kilometres, both in the NE Atlantic and the Mediterranean, and tested whether the observed patterns differed between the two basins. We focused on canopy-forming macroalgae and associated understorey assemblages in the low intertidal, and on the distribution of Patella limpets at mid intertidal levels. Our results highlight that patterns of spatial variation, at each scale investigated, were consistent between the Atlantic and the Mediterranean, suggesting that similar ecological processes operate in these regions. In contrast with former studies, variability in canopy cover, species richness and limpet abundance was equally distributed among spatial scales, possibly reflecting the fingerprint of multiple processes. Variability in community structure of low intertidal assemblages, instead, peaked at the largest scale, suggesting that oceanographic processes and climatic gradients may be important. We conclude that formal comparisons of variability across scales nested in contrasting systems are needed, before any generalization on patterns and processes can be made.

In the frame of the COST ACTION ‘EMBOS’ (Development and implementation of a pan-European Marine Biodiversity Observatory System), coverage of intertidal macroalgae was estimated at a range of marine stations along the European coastline (Subarctic, Baltic, Atlantic, Mediterranean). Based on these data, we tested whether patterns in macroalgal diversity and distribution along European intertidal rocky shores could be explained by a set of meteo-oceanographic variables. The variables considered were salinity, sea surface temperature, photosynthetically active radiation, significant wave height and tidal range and were compiled from three different sources: remote sensing, reanalysis technique and in situ measurement. These variables were parameterized to represent average conditions (mean values), variability (standard deviation) and extreme events (minimum and maximum values). The results obtained in this study contribute to reinforce the EMBOS network approach and highlight the necessity of considering meteo-oceanographic variables in long-term assessments. The broad spatial distribution of pilot sites has allowed identification of latitudinal and longitudinal gradients manifested through species composition, diversity and dominance structure of intertidal macroalgae. These patterns follow a latitudinal gradient mainly explained by sea surface temperature, but also by photosynthetically active radiation, salinity and tidal range. Additionally, a longitudinal gradient was also detected and could be linked to wave height.

The purple sea urchin P. lividus is a marine resource greatly valued for its highly nutritious roe. The objective of this work is to analyse the spatial distribution pattern and population structure of this species in the region of Cantabria (Bay of Biscay) in order to identify the most appropriate zones for sustainable harvesting and for the establishment of adequate management strategies. Two depth ranges were studied (<5 and 5–10 m) in five coastal areas. The available stock of commercial individuals (size >55 mm) was estimated based on the density of individuals and biometric parameters. Significant differences were found among areas but not among depth ranges. Three areas showed low densities with large individuals, whereas two areas showed high densities with small individuals. Despite the average smaller size of the individuals, these high-density areas accumulated 76% of the commercial stock, making these the most suitable zones for the sustainable harvesting of P. lividus in the region. The high variability of the observed density values resulted in elevated uncertainty in the estimation of stocks. However, the high sea urchin densities together with the high percentages of commercial individuals suggest that the resource is currently underexploited. Further studies should be carried out, and precautionary measures should be adopted before opening the fishery. The suitability of many of these measures is discussed in the present work, as a necessary step in the management of the P. lividus fishery in Cantabria.

Light adaptive strategies were studied in a comparative analysis of the congeneric seagrass species Zostera muelleri and Zostera marina at two case study areas in New Zealand and Germany. Surveys in intertidal seagrass meadows were conducted from pre-dawn until sunset on days when either low or high tide coincided with noon. The results show marked fluctuations of photophysiology (optimum and effective quantum yield, non-photochemical quenching, cycling of xanthophyll cycle (XC) pigments) over daily and tidal cycles. At both locations, we observed a near complete conversion (de-epoxidation) of violaxanthin to zeaxanthin at times with high irradiance and a rapid and complete re-epoxidation under subsequent lower light conditions. At the New Zealand site we also observed significantly larger XC-pigment pool sizes in seagrass leaves sampled in a week when low tide coincided with noon (larger daily fluence and higher maximum irradiance), compared with leaves sampled in a week when high tide was at noon. This dynamic adjustment of xanthophyll pool size has not been previously reported for intertidal seagrasses. It adds to our understanding of an important adaptive feature in a highly dynamic light environment and to the general ecology and adaptability of seagrasses.

The study analyses the role of non-indigenous invertebrates in the food webs of two eutrophic brackish estuarine ecosystems of the Baltic Sea: the Neva River estuary and the Curonian Lagoon, with the aim of clarifying several questions such as what trophic levels were occupied by newly established species (mainly amphipods and mysids) and whether they can affect the native benthic invertebrates as a result of their possible carnivorous nature. Stable isotope analysis (δ15N values) and gut contents analysis of field-collected specimens were used to estimate trophic level and trophic links of the newly established malacostracan crustaceans, while their consumption rates when feeding as carnivores were measured experimentally. The δ15N analysis allocated four trophic levels (TL) in the coastal food webs of both studied ecosystems with the lowest δ15N (2–4‰) for detritus and algae and the highest for fish (12–14‰). Through their high abundance, non-indigenous crustaceans (Pontogammarus robustoides, Gmelinoides fasciatus, Obessogammarus crassus, Gammarus tigrinus, Limnomysis benedeni and Paramysis lacustris) have become important members of food chains of the studied ecosystems. Their trophic position varied significantly within species during ontogenesis. This suggests that they turned from being typically detritivores/plantivorous (TL 2–2.4) at juvenile stages to omnivores (2.5–3) or to carnivores (>3) as adults. Assessment of the predation pressure by the adult amphipods on other coexisting invertebrates (in the example of the Neva Estuary) showed a low or medium impact, depending on species of predator and productivity of its potential prey organisms.

A survey of publications and collections databases reveals a pattern of non-indigenous decapods distribution in the 13 seas around Russia and adjacent countries. No alien species were reported from Russian territorial waters and exclusive economic zone in the Japan, Okhotsk, west Bering and most of the Siberian shelf Seas. From the seas and their basins in East Europe, 13 alien species have been recorded, with seven of these yet to become established. Established or commonly occurring species can be categorized as: ‘global invaders’ (Chinese mitten crab, Eriocheir sinensis in the White, Baltic, Black, Azov and Caspian Seas; and Harris mud crab, Rhithropanopeus harrisii in all mentioned seas, except the White Sea); ‘regional aliens’ (Palaemon adspersus and P. elegans in the Caspian Sea and the latter species in the Baltic); and ‘Arctic invaders’ (Kamchatka king crab Paralithodes camtschaticus and snow crab Chionoecetes opilio). Eriocheir sinensis is the most widely occurring alien decapod species, but there are no indications of an established population in East Europe. For this and other mentioned crab species, invasion history, distribution and important biological data are reviewed. In the seas where few or no native crab species have been present, Harris mud crab (in the Azov and Caspian Seas), Kamchatka crab (in the Barents Sea) and snow crab (in the Barents and Kara Seas) have shown rapid establishment (within two decades) of an invasive population throughout an entire basis or its significant part.

The invasive alien mytilid species, Brachidontes pharaonis, forms a biogenic habitat in the mediolittoral and upper-infralittoral zones of the Levantine Sea, hosting a number of alien and native species. Examinations of samples taken from dense, continuous mussel beds at seven stations along the coast of northern Levantine Sea yielded 187 macro-benthic invertebrate species belonging to 11 taxonomic groups. Polychaeta accounted for 46% and 37% of the total number of species and individuals, respectively. The top three dominant species in the mussel beds were Stenothoe gallensis, Spirobranchus kraussi and Mytilaster minimus. The species with the highest frequency values on the mussel beds were Pseudonereis anomala, Phascolosoma stephensoni and Elasmopus pocillimanus. The highest density and biomass of the associated fauna were estimated as 42,550 ind m−2 and 1503 wwt g m−2, respectively. The species number in samples varied between 14 and 47 species. The environmental variables best explaining variations in zoobenthic community structures were salinity, dissolved oxygen and total inorganic nitrogen in the water column. The biotic indices, TUBI and ALEX, classified the ecological status of one or two stations as moderate or poor, based on the relative abundances of ecological and zoogeographic groups, respectively. A total of 21 alien species were found to be associated with the mussel bed, of which Syllis ergeni is being newly considered as a new established alien species for the Mediterranean Sea. The maximum density of associated alien species was calculated as 30,300 ind m−2. The alien species assemblages were greatly affected by salinity and total inorganic nitrogen.

Observations of citizen scientists have become an indispensable source in the collection of biodiversity data worldwide. In Greece, the findings of these citizen scientists, in collaboration with the Hellenic Network on Aquatic Invasive Species (ELNAIS), have resulted in compiling diverse information on marine alien species. Since 2004, the Liamis Dive Centre has recorded visual data on 12 marine alien species around Pserimos Island (Dodekanisa, Greece), thus enabling us to sequence their progression and displacement amongst other vital information. The real number of biological invasions is likely to be higher than reported here because citizen scientists do not have the scientific skills required for species identification and also due to financial constraints. Nevertheless, the high number of observers to a certain extent compensates the lack of taxonomic expertise.

Fish catch composition in 21 gill net samplings performed between 2014 and 2015 at Rhodes Island (Aegean Sea, Greece) was analysed, with the aim to contribute in filling scattered information on coastal fish assemblages in a Mediterranean region heavily impacted by biological invasions. A total biomass of 183 kg was collected comprising 1070 fish individuals, distributed along 43 native and six Lessepsian migrant species. The alien Siganus luridus prevailed in terms of frequency of occurrence, followed by the native Sparisoma cretense, which exhibited the higher abundance and biomass, followed by S. luridus, Scorpaena scrofa and Siganus rivulatus. Ratios between alien and native species as well as between their abundance and biomass are discussed.