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Ontogenetic habitat utilization of a coral reef fish, Acanthurus xanthopterus Valenciennes, 1835 in a tropical estuarine system, South India; A first report with its morphological and molecular descriptions

Published online by Cambridge University Press:  21 February 2025

Nidhin Balachandran*
Affiliation:
School of Industrial Fisheries, Cochin University of Science and Technology, Kochi 682016, Kerala, India
Deepak Jose
Affiliation:
CSIR-National Institute of Oceanography, Dona Paula, Goa 403004, India
Harikrishnan Mahadevan
Affiliation:
School of Industrial Fisheries, Cochin University of Science and Technology, Kochi 682016, Kerala, India
Sruthi Kutteri
Affiliation:
School of Industrial Fisheries, Cochin University of Science and Technology, Kochi 682016, Kerala, India
Rithin Raj Mozhikulangara
Affiliation:
School of Industrial Fisheries, Cochin University of Science and Technology, Kochi 682016, Kerala, India
*
Corresponding author: Nidhin Balachandran; Email: [email protected]

Abstract

Providing nursery habitats to a number of marine fish larvae that recruit after prolonged pelagic larval duration, has been identified as one of ecosystem services rendered by estuaries and protected inshore water bodies like mangroves, mudflats, swamps, and marshes. Larval fish congregation and survival are largely dependent on abiotic and biotic potential of such systems and many migrant marine fishes are adapted to them. However, occurrences of larval forms of tropical reef-associated vagrant species which are known for extensive range adaptations generate considerable academic interest. The present study provides the first report of ontogenic habitat utilization of yellow fin surgeon fish, Acanthurus xanthopterus Valenciennes 1835 in a tropical microtidal positive estuary, the Vembanad lake, South India. Surface plankton collections from the downstream part of the estuary revealed considerable proportions of acanthurid larvae in post monsoon (mean 354 ± 180 numbers/100 m3) and pre monsoon (mean 217 ± 120 numbers/100 m3) while they were absent in monsoon season. These acronurus larval forms were morphologically identified and sorted before being subjected for DNA barcoding. Mitochondrial DNA COI sequences developed from morphologically characterized acronurus larvae exhibited genetic congruency to sequence of A. xanthopterus which was evident from phylogram (bootstrap support of 100) and genetic distance data (intraspecific distance of 0%). The study indicates that Acronurus larvae of A. xanthopterus, after extensive cross-habitat dispersal, utilize the estuarine habitat to promote potential growth.

Type
Research Article
Copyright
Copyright © The Author(s), 2025. Published by Cambridge University Press on behalf of Marine Biological Association of the United Kingdom

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References

Ajith Kumar, TT, Vinoth, R, Prakash, S and Balasubramanian, T (2012) Reef Fishes of the Lakshadweep Archipelago. Kolkata: Zoological Survey of India, 1–180pp.Google Scholar
Asha, CV, Suson, PS, Retina, CI and Nandan, SB (2014) Decline in diversity and production of exploited fishery resources in Vembanad wetland system: strategies for better management and conservation. Open Journal of Marine Science 4, 344.CrossRefGoogle Scholar
Baiju, PT, Prabhakaran, MP, Benno Pereira, FG and Jayaprakas, V (2016) Rocky reef-associated fish diversity of South Kerala Coast, India. Journal of Aquatic Biology & Fisheries 4, 3144.Google Scholar
Beck, MW, Heck, KL, Able, KW, Childers, DL, Eggleston, DB, Gillanders, BM, Halpern, B, Hays, CG, Hoshino, K, Minello, TJ and Orth, RJ (2001) The identification, conservation, and management of estuarine and marine nurseries for fish and invertebrates: a better understanding of the habitats that serve as nurseries for marine species and the factors that create site-specific variability in nursery quality will improve conservation and management of these areas. Bioscience 51, 633641.CrossRefGoogle Scholar
Boehlert, GW and Mundy, BC (1988) Roles of behavioral and physical factors in larval and juvenile fish recruitment to estuarine nursery areas. In American Fisheries Society Symposium 3, No. 5, pp. 167.Google Scholar
Boeuf, G and Payan, P (2001) How should salinity influence fish growth? Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology 130, 411423.Google ScholarPubMed
Bonhomme, F and Planes, S (2000) Some evolutionary arguments about what maintains the pelagic interval in reef fishes. Environmental Biology of Fishes 59, 365383.CrossRefGoogle Scholar
Breitburg, DL, Palmer, MA and Loher, T (1995) Larval distributions and the spatial patterns of settlement of an oyster reef fish: responses to flow and structure. Marine Ecology Progress Series 125, 4560.CrossRefGoogle Scholar
Cambra, M, Cubero, R, Chinchilla, I and Azofeifa-Solano, JC (2018) A new record of the indo-Pacific Whitespotted surgeonfish, Acanthurus guttatus, in the eastern tropical Pacific (Isla del Coco, Costa Rica). Marine Biodiversity Records 11, 15.CrossRefGoogle Scholar
Castellanos-Gell, J, Robainas-Barcia, A, Casane, D, Chevalier-Monteagudo, P, Pina-Amargos, F and García-Machado, (2012) The surgeonfish, Acanthurus bahianus, has crossed the Amazon–Orinoco outflow barrier. Marine Biology 159, 15611565.CrossRefGoogle Scholar
Dahlgren, CP, Kellison, GT, Adams, AJ, Gillanders, BM, Kendall, MS, Layman, CA, Ley, JA, Nagelkerken, I and Serafy, JE (2006) Marine nurseries and effective juvenile habitats: concepts and applications. Marine Ecology Progress Series 312, 291295.CrossRefGoogle Scholar
Dando, PR (1984) Reproduction in estuarine fish. In Potts GW and Wootton RJ (eds), Fish Reproduction: Strategies and Tactics. London: Academic Press, pp. 155170.Google Scholar
Deepak, J and Harikrishnan, M (2017) Non-homologous COI barcode regions: a serious concern in decapod molecular taxonomy. Mitochondrial DNA Part A 28, 482492.Google Scholar
De La Moriniere, EC, Pollux, BJ, Nagelkerken, I and Van der Velde, G (2002) Post-settlement life cycle migration patterns and habitat preference of coral reef fish that use seagrass and mangrove habitats as nurseries. Estuarine, Coastal and Shelf Science 55, 309321.CrossRefGoogle Scholar
de Paiva, AC, Lima, MF, de Souza, JR and Araujo, ME (2009) Spatial distribution of the estuarine ichthyofauna of the Rio Formoso (Pernambuco, Brazil), with emphasis on reef fish. Zoologia (Curitiba) 26, 266278.CrossRefGoogle Scholar
Devi, K and Rao, DV (2003) A Field Guide to the Fishes of Acanthuridae (Surgeonfishes) and Siganidae (Rabbitfishes) of Andaman & Nicobar Islands. Kolkata: Zoological Survey of India, 42 pp.Google Scholar
Feary, DA, Pratchett, MS, Emslie, MJ, Fowler, AM, Figueira, WF, Luiz, OJ, Nakamura, Y and Booth, DJ (2014) Latitudinal shifts in coral reef fishes: why some species do and others do not shift. Fish and Fisheries 15, 593615.CrossRefGoogle Scholar
Ferreira, GV, Barletta, M, Lima, AR, Dantas, DV, Justino, AK and Costa, MF (2016) Plastic debris contamination in the life cycle of Acoupa weakfish (Cynoscion acoupa) in a tropical estuary. ICES Journal of Marine Science 73, 26952707.CrossRefGoogle Scholar
Fisher, R, Leis, JM, Clark, DL and Wilson, SK (2005) Critical swimming speeds of late-stage coral reef fish larvae: variation within species, among species and between locations. Marine Biology 147, 12011212.CrossRefGoogle Scholar
Fokkema, W, van der Jeugd, HP, Lameris, TK, Dokter, AM, Ebbinge, BS, de Roos, AM, Nolet, BA, Piersma, T and Olff, H (2020) Ontogenetic niche shifts as a driver of seasonal migration. Oecologia 193, 285297.CrossRefGoogle ScholarPubMed
Fricke, R, Eschmeyer, WN and van der Laan, R (2022) Eschmeyer's catalog of fishes: Genera, Species, References. Available at http://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatmain.asp (Electronic version accessed 2022).Google Scholar
Grol, MG, Dorenbosch, M, Kokkelmans, EM and Nagelkerken, I (2008) Mangroves and seagrass beds do not enhance growth of early juveniles of a coral reef fish. Marine Ecology Progress Series 366, 137146.CrossRefGoogle Scholar
Grol, MG, Nagelkerken, I, Rypel, AL and Layman, CA (2011) Simple ecological trade-offs give rise to emergent cross-ecosystem distributions of a coral reef fish. Oecologia 165, 7988.CrossRefGoogle ScholarPubMed
Grol, MG, Rypel, AL and Nagelkerken, I (2014) Growth potential and predation risk drive ontogenetic shifts among nursery habitats in a coral reef fish. Marine Ecology Progress Series 502, 229244.CrossRefGoogle Scholar
Hall, T (1999) Bioedit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. In Nucleic Acids Symposium Series 41, 9598.Google Scholar
Igulu, MM, Nagelkerken, I, Dorenbosch, M, Grol, MG, Harborne, AR, Kimirei, IA, Mumby, PJ, Olds, AD and Mgaya, YD (2014) Mangrove habitat use by juvenile reef fish: meta-analysis reveals that tidal regime matters more than biogeographic region. PloS One 9, e114715.CrossRefGoogle ScholarPubMed
Jacob, B, Revichandran, C and Naveen Kumar, KR (2013) Salt intrusion study in Cochin estuary-using empirical models. Indian Journal of Geo-Marine Sciences 42, 304313.Google Scholar
Jose, D, Mahadevan, H, Rozario, JV, Pradeep, PJ, Maitra, S and Shamsudheen, S (2020) Targeted species substitution in giant freshwater prawn trade revealed by genotyping. Aquaculture Research 51, 687695.CrossRefGoogle Scholar
Kapsenberg, L and Cyronak, T (2019) Ocean acidification refugia in variable environments. Global Change Biology 25, 32013214.CrossRefGoogle ScholarPubMed
Kimirei, IA, Nagelkerken, I, Trommelen, M, Blankers, P, Van Hoytema, N, Hoeijmakers, D, Huijbers, CM, Mgaya, YD and Rypel, A (2013) What drives ontogenetic niche shifts of fishes in coral reef ecosystems? Ecosystems 16, 783796.CrossRefGoogle Scholar
Kripa, V, Jenni, B, Chinnadurai, S, Khambadkar, LR, Prema, D and Mohamed, KS (2014) Effects of acidification of meroplanktonic oyster settlement in a tropical estuary. Indian Journal of Geo-Marine Sciences 43, 16751681.Google Scholar
Kuiter, RH and Tonozuka, T (2001) Pictorial guide to Indonesian reef fishes–Zoonetics-Australia.Google Scholar
Kumar, S, Stecher, G, Li, M, Knyaz, C and Tamura, K (2018) MEGA x: molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution 35, 15471549.CrossRefGoogle ScholarPubMed
Kurup, BM and Samuel, CT (1985) Fish and fishery resources of Vembanad Lake. In Ravindran, K, Nair, NU, Perigreen, PA, Pillai, AGG, Panicker, PA and Thomas, M (eds), Harvest and Post-Harvest Technology of Fishes. Kochi, India: Central Institute of Fisheries Technology (CIFT) & Society of Fisheries Technologists (SOFTI), pp. 7782.Google Scholar
Lakra, WS, Verma, MS, Goswami, M, Lal, KK, Mohindra, V, Punia, P, Gopalakrishnan, A, Singh, KV, Ward, RD and Hebert, P (2011) DNA barcoding Indian marine fishes. Molecular Ecology Resources 11, 6071.CrossRefGoogle ScholarPubMed
Lehnert, RL and Allen, DM (2002) Nekton use of subtidal oyster shell habitat in a southeastern US estuary. Estuaries 25, 10151024.CrossRefGoogle Scholar
Leis, JM (1991) The pelagic phase of coral reef fishes: larval biology of coral reef fishes. In Sale PF (ed.), The Ecology of Fishes on Coral Reefs. San Diego: Academic Press, pp. 183230.CrossRefGoogle Scholar
Leis, JM (2010) Ontogeny of behaviour in larvae of marine demersal fishes. Ichthyological Research 57, 325342.CrossRefGoogle Scholar
Leis, JM and Carson-Ewart, BM (2000) The larvae of Indo-Pacific Coastal Fishes: An Identification Guide to Marine Fish larvae, vol. 2. Leiden: Brill.CrossRefGoogle Scholar
Leis, JM and McCormick, MI (2002) The biology, behavior, and ecology of the pelagic, larval stage of coral reef fishes. In Sale PF (ed.), Coral Reef Fishes: Dynamics and Diversity in a Complex Ecosystem. Elsevier, pp. 171199.CrossRefGoogle Scholar
Leis, JM, Sweatman, HP and Reader, SE (1996) What the pelagic stages of coral reef fishes are doing out in blue water: daytime field observations of larval behavioural capabilities. Marine and Freshwater Research 47, 401411.CrossRefGoogle Scholar
Lima, AR, Barletta, M and Costa, MF (2015) Seasonal distribution and interactions between plankton and microplastics in a tropical estuary. Estuarine, Coastal and Shelf Science 165, 213225.CrossRefGoogle Scholar
McCormick, MI (1999) Delayed metamorphosis of a tropical reef fish (Acanthurus triostegus): a field experiment. Marine Ecology Progress Series 176, 2538.CrossRefGoogle Scholar
McLusky, DS and Elliott, M (2004) The Estuarine Ecosystem: Ecology, Threats and Management. England: OUP Oxford, pp. 621628.CrossRefGoogle Scholar
Miller, B and Kendall, AW (2009) Early Life History of Marine Fishes. Berkeley, California, USA: University of California Press.Google Scholar
Molina, A, Duque, G and Cogua, P (2020) Influences of environmental conditions in the fish assemblage structure of a tropical estuary. Marine Biodiversity 50, 13.CrossRefGoogle Scholar
Muley, EV, Venkataraman, K, Alfred, JR and Wafar, MV (2002) Status of coral reefs of India. In Proceedings of the Ninth International Coral Reef Symposium, Bali, 23–27 October 2000, Vol. 2, pp. 847853.Google Scholar
Nagelkerken, I, Dorenbosch, M, Verberk, WC, De La Morinière, EC and Van Der Velde, G (2000a) Day-night shifts of fishes between shallow-water biotopes of a Caribbean bay, with emphasis on the nocturnal feeding of Haemulidae and Lutjanidae. Marine Ecology Progress Series 194, 5564.CrossRefGoogle Scholar
Nagelkerken, I, Dorenbosch, M, Verberk, WC, De La Morinière, EC and van Der Velde, G (2000b) Importance of shallow-water biotopes of a Caribbean bay for juvenile coral reef fishes: patterns in biotope association, community structure and spatial distribution. Marine Ecology Progress Series 202, 175192.CrossRefGoogle Scholar
Nagelkerken, I, Kleijnen, S, Klop, T, Van Den Brand, RA, de La Moriniere, EC and Van der Velde, G (2001) Dependence of Caribbean reef fishes on mangroves and seagrass beds as nursery habitats: a comparison of fish faunas between bays with and without mangroves/seagrass beds. Marine Ecology Progress Series 214, 225235.CrossRefGoogle Scholar
Nagelkerken, I, Roberts, CV, Van Der Velde, G, Dorenbosch, M, Van Riel, MC, De La Moriniere, EC and Nienhuis, PH (2002) How important are mangroves and seagrass beds for coral-reef fish? The nursery hypothesis tested on an island scale. Marine Ecology Progress Series 244, 299305.CrossRefGoogle Scholar
Ogden, JC and Quinn, TP (1984) Migration in coral reef fishes: ecological significance and orientation mechanisms. In McCleave JD, Geoffrey PA, Julian JD and William HN (eds), Mechanisms of Migration in Fishes. Boston, MA: Springer, pp. 293308.CrossRefGoogle Scholar
Panprommin, D, Soontornprasit, K, Tuncharoen, S and Iamchuen, N (2020) The utility of DNA barcoding for the species identification of larval fish in the lower Ing river, Thailand. Turkish Journal of Fisheries and Aquatic Sciences 20, 671679.CrossRefGoogle Scholar
Prakash, S, Balamurugan, J, Kumar, TA and Balasubramanian, T (2012) Invasion and abundance of reef inhabiting fishes in the Vellar estuary, southeast coast of India, especially the lionfish Pterois volitans Linnaeus. Current Science 103, 941944.Google Scholar
Randall, JE (1961) Contribution to the biology of the convict surgeonfish of the Hawaiian Islands, Acanthurus triostegus sandvicensis. Pacific Science 15, 215272.Google Scholar
Randall, JE (2001) Surgeonfishes of the World. Hawai, USA: Bishop Museum Press.Google Scholar
Reintjes, JW and King, JE (1953) Food of yellowfin tuna in the central Pacific. US Fish and Wildlife service. Fishery Bulletin 81, 91110.Google Scholar
Robertson, DR, Grove, JS and McCosker, JE (2004) Tropical transpacific shore fishes. Pacific Science 58, 507565.CrossRefGoogle Scholar
Rodrigues, SM, Almeida, CM, Silva, D, Cunha, J, Antunes, C, Freitas, V and Ramos, S (2019) Microplastic contamination in an urban estuary: abundance and distribution of microplastics and fish larvae in the Douro estuary. Science of the Total Environment 659, 10711081.CrossRefGoogle Scholar
Roshni, K, Renjithkumar, CR, Raghavan, R and Ranjeet, K (2021) Fish distribution and assemblage structure in a hydrologically fragmented tropical estuary on the south-west coast of India. Regional Studies in Marine Science 43, 101693.CrossRefGoogle Scholar
Seitz, RD, Wennhage, H, Bergström, U, Lipcius, RN and Ysebaert, T (2014) Ecological value of coastal habitats for commercially and ecologically important species. ICES Journal of Marine Scienc 71, 648665.CrossRefGoogle Scholar
Stephens, DW and Krebs, JR (2019) Foraging Theory. Berkeley, California, USA: Princeton University Press.CrossRefGoogle Scholar
Strydom, NA (2015) Patterns in larval fish diversity, abundance, and distribution in temperate South African estuaries. Estuaries and Coasts 38, 268284.CrossRefGoogle Scholar
Sutherland, WJ (1996) Predicting the consequences of habitat loss for migratory populations. In Proceedings of the Royal Society of London. Series B: Biological Sciences 263, 13251327.Google Scholar
Takahashi, I (2005) Study on the early life history of ayu in the Shimanto estuary, Japan. Bulletin of Marine Science and Fisheries Kochi University 23, 113173.Google Scholar
Thompson, JD, Gibson, TJ, Plewniak, F, Jeanmougin, F and Higgins, DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 25, 48764882.CrossRefGoogle ScholarPubMed
Tran, NS, Trinh-Dang, M and Brancelj, A (2021) Two new species of Parastenocaris (Copepoda, Harpacticoida) from a hyporheic zone and overview of the present knowledge on stygobiotic Copepoda in Vietnam. Diversity 13, 534.CrossRefGoogle Scholar
Unnikrishnan Nair, N and Balakrishnan Nair, N (1984) Studies on the Back Water Oyster, Grassostrea madrasensis (Preston) of Cochin Harbour (Ph.D. Thesis). Cochin University of Science and Technology.Google Scholar
Ward, RD, Zemlak, TS, Innes, BH, Last, PR and Hebert, PD (2005) DNA barcoding Australia's fish species. Philosophical Transactions of the Royal Society B: Biological Sciences 360, 18471857.CrossRefGoogle ScholarPubMed
Wasserman, RJ and Strydom, NA (2011) The importance of estuary head waters as nursery areas for young estuary- and marine-spawned fishes intemperate South Africa. Estuarine, Coastal and Shelf Science 94, 5667.CrossRefGoogle Scholar
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