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Published online by Cambridge University Press: 15 October 2021
For the facilitation of students and readers relevant on-line resources have been listed below:
1. Protein structure prediction model including homology modeling, protein threading, and secondary structure prediction:
http://www.scfbioiitd.res.in/bhageerath/bhageerath_h.jsp
http://www.reading.ac.uk/bioinf/IntFOLD/
http://raptorx.uchicago.edu/
http://www.cbs.dtu.dk/services/CPHmodels/
https://arquivo.pt/wayback/20160514083149/http://toolkit.tuebingen.mpg.de/hhpred
https://toolkit.tuebingen.mpg.de/tools/hhpred
http://protein.ict.ac.cn/FALCON/
http://bioinf.cs.ucl.ac.uk/psipred/
https://www.predictprotein.org/
2. Protein yield and size:
https://www.expasy.org/resources/search/keywords:gel%20electrophoresis
3. Western blot:
https://www.licor.com/bio/image-studio-lite/
4. Antigen prediction tool:
https://www.genscript.com/antigen-design.html
http://tools.immuneepitope.org/bcell/
https://www.expasy.org/resources/search/keywords:epitope
5. Epitope analysis and mapping tool:
https://www.integralmolecular.com/epitope-mapping/?gclid=EAIaIQobChMIjcaZks-76wIVEovICh1NKwUHEAAYASAAEgIauvD_BwE
http://tools.iedb.org/main/
6. ELISA software and data analysis:
https://www.elisaanalysis.com/
https://www.mybiosource.com/my_assay_data_analyzing_software
7. 3D view inside the cell:
http://sciencenetlinks.com/tools/icell-app/
https://edshelf.com/tool/3d-cell-simulation-and-stain-tool/
8. Construction of cell membrane:
https://www.wisc-online.com/learn/natural-science/life-science/ap1101/construction-of-thecell-membrane
9. Analysis of mitotic defects, segmentation, tracking, feature extraction:
http://www.bioquant.uni-hd.de/bmcv/genomeresearch
http://www.csie.ntu.edu.tw/∼cjlin/libsvm
https://github.com/bnoi/MAARS/tree/master/doc/demos
10. Confluency measurement and evaluation:
https://opencirrus.org/
http://www.samba.org/ftp/rsync/rsync.html
https://doi.org/10.1371/journal.pone.0027672.g003
https://doi.org/10.1371/journal.pone.0027672.g004
https://doi.org/10.1371/journal.pone.0027672.t002
11. Enzyme kinetic analysis and rate analysis:
https://icekat.herokuapp.com/icekat
https://github.com/SmithLabMCW/icekat/blob/master/icekat/test.csv)
12. Designing enzymes:
https://www.creative-biolabs.com/computer-aided-enzyme-design.html
https://www.rosettacommons.org/software
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