Habitat structure increases richness and abundance of species in many environments by providing easy access to resources and refuge from predators. In coral reefs, corals are habitat for many organisms and differences in their morphologies may act as variation in habitat structure for associated fauna. In the present study, we investigate whether there are differences in the richness and abundance of molluscs associated with three species of Mussismilia corals exhibiting different growth morphologies, in two different reef areas of the Bahia state. Mussismilia harttii has a meandroid pattern, M. hispida is a massive coral, M. braziliensis also has a massive growth pattern with crevices at the corallum base. Coral characteristics were measured in the laboratory. Significant differences were identified for richness among coral species – higher values were reported in colonies of M. harttii and no significant statistical differences were observed between M. braziliensis and M. hispida. Considering the density of associated molluscs, the same pattern was found. The results are in accordance with previous studies and indicate the importance of M. harttii as a key habitat to maintain a richer and more abundant associated fauna. The internal volume of interpolypal space is an important factor influencing the richness and density of associated species.

This study provides a baseline describing natural small scale variability of Symbiodinium density in the sentinel coral Acropora globiceps during the summer, under non-bleaching conditions. Spatial scales investigated range from the colony scale (1–10 cm, i.e. among branches of the same colony) to the reef scale (1–10 km, i.e. among stations distributed over several locations and depths), at Moorea Island, French Polynesia. The coral–Symbiodinium symbiosis is a key process in scleractinian coral physiology, and Symbiodinium density provides an easy-to-measure and inexpensive biomarker of this symbiosis health. Spatial variability of three major environmental factors: light intensity, sedimentation and water motion was also assessed to evaluate their potential link with Symbiodinium density. Density of Symbiodinium did not significantly differ within colonies or among colonies within a station. However, a marked depth gradient was observed, showing increasing density with increasing depth and decreasing light intensity. These observations provide an interesting reference for forthcoming comparisons with disturbed conditions, such as bleaching events.

Molecular biological methods including genomic and proteomic approaches hold a specific promise to provide new insights into the stress physiology of corals. However, to fully exploit the power of these techniques, aquarium setups are required that allow biological assays under tightly controlled laboratory conditions. Here, details are provided about the successful development of a closed coral mesocosm at the National Oceanography Centre, Southampton. The system can be operated without access to natural seawater and allows long-term observations and experimental studies of reef corals. The individual experimental tanks allow the corals to be exposed, for example, to different light and/or temperature conditions without the need to disconnect them from the system.

Sampling scale and lack of attention to taxa other than scleractinian corals have limited the capacity to protect coral reefs and coral communities in Pacific Panama. The distribution of coral habitats (live coral cover) and their species richness in the largest marine protected area of Panama, the Coiba National Park (270 125 ha), is described using quadrat transects and manta tows. The species richness of scleractinian corals and octocorals was lower in coral reefs than in coral communities, and a close relationship between richness and live coral cover was observed only in coral communities. The distribution of high live coral cover in coral communities overlapped with areas of high coral species richness. Average live coral cover in communities was 64%, compared to 28% in reefs, whereas algae cover was 30% and 49%, respectively. Twenty-two coral and 34 octocoral species were observed, many only now detected in Panama as endemic or new species. Analysis of satellite imagery showed 80% of terrestrial habitats were mostly primary forest, and coral reefs and coral communities covered 1700 ha, about 2% of marine habitats. Shallow marine environments (< 20 m) had up to 60% calcareous red algae cover (rhodolite beds). Based on the distribution of live coral cover and species richness, three conservation units were identified as priority, with the southern and northernmost sides of the marine protected area as the most significant. These three areas encompass most of the rare and endemic species or populations, as well as species previously regarded as endangered.