All the protein sequences from SWISS-PROT database
were analyzed for occurrence of single amino acid repeats,
tandem oligo-peptide repeats, and periodically conserved
amino acids. Single amino acid repeats of glutamine, serine,
glutamic acid, glycine, and alanine seem to be tolerated
to a considerable extent in many proteins. Tandem oligo-peptide
repeats of different types with varying levels of conservation
were detected in several proteins and found to be conspicuous,
particularly in structural and cell surface proteins. It
appears that repeated sequence patterns may be a mechanism
that provides regular arrays of spatial and functional
groups, useful for structural packing or for one to one
interactions with target molecules. To facilitate further
explorations, a database of Tandem Repeats in Protein
Sequences (TRIPS) has been developed and
is available at URL: http://www.ncl-india.org/trips.