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modeling disease dynamics

Mathematical Modelling of Natural Phenomena (1)

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Using R to Build and Assess Network Models inBiology
G. Hartvigsen
Journal:

Mathematical Modelling of Natural Phenomena / Volume 6 / Issue 6 / 2011

Published online by Cambridge University Press:

05 October 2011, pp. 61-75

Print publication:

2011
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In this paper we build and analyze networks using the statistical and programmingenvironment R and the igraph package. We investigate random, small-world, and scale-freenetworks and test a standard problem of connectivity on a random graph. We then develop amethod to study how vaccination can alter the structure of a disease transmission network.We also discuss a variety of other uses for networks in biology.