The present study investigates the behaviour of the shock train in a typical Ramjet engine under the influence of shock and expansion waves at the entry of a low aspect ratio (1:0.75) rectangular duct/isolator at supersonic Mach number (M = 1.7). The start/unstart characteristics are investigated through steady/unsteady pressure measurements under different back and dynamic pressures while the shock train dynamics are captured through instantaneous Schlieren flow visualisation. Two parameters, namely pressure recovery and the pressure gradient, is derived to assess the duct/isolator performance. For a given back pressure, with maximum blockage (9% above nominal), the duct/isolator flow is established when the dynamic pressure is increased by 23.5%. The unsteady pressure measurements indicate different scales of eddies above 80 Hz (with and without flap deflection). Under the no flap deflection (no back pressure) condition, the maximum fluctuating pressure component is 0.01% and 0.1% of the stagnation pressure at X/L = 0.03 (close to the entry of the duct) and X/L = 0.53 (middle of the duct), respectively. Once the flap is deflected (δ = 8°), decay in eddies by one order is noticed. Further increase in back pressure (δ ≥ 11°) leads the flow to unstart where eddies are observed to be disappeared.