Hostname: page-component-cd9895bd7-q99xh Total loading time: 0 Render date: 2024-12-27T08:22:14.726Z Has data issue: false hasContentIssue false

Within- and between-host dynamics of producer and non-producer pathogens

Published online by Cambridge University Press:  03 July 2023

Victoria L. Pike
Affiliation:
Department of Biology, University of Oxford, Oxford, UK
Emily J. Stevens
Affiliation:
Department of Biology, University of Oxford, Oxford, UK
Ashleigh S. Griffin
Affiliation:
Department of Biology, University of Oxford, Oxford, UK
Kayla C. King*
Affiliation:
Department of Biology, University of Oxford, Oxford, UK Department of Zoology, University of British Columbia, Vancouver, Canada Department of Microbiology & Immunology, University of British Columbia, Vancouver, Canada
*
Corresponding author: Kayla C. King; Email: [email protected]

Abstract

For infections to be maintained in a population, pathogens must compete to colonize hosts and transmit between them. We use an experimental approach to investigate within-and-between host dynamics using the pathogen Pseudomonas aeruginosa and the animal host Caenorhabditis elegans. Within-host interactions can involve the production of goods that are beneficial to all pathogens in the local environment but susceptible to exploitation by non-producers. We exposed the nematode host to ‘producer’ and two ‘non-producer’ bacterial strains (specifically for siderophore production and quorum sensing), in single infections and coinfections, to investigate within-host colonization. Subsequently, we introduced infected nematodes to pathogen-naive populations to allow natural transmission between hosts. We find that producer pathogens are consistently better at colonizing hosts and transmitting between them than non-producers during coinfection and single infection. Non-producers were poor at colonizing hosts and between-host transmission, even when coinfecting with producers. Understanding pathogen dynamics across these multiple levels will ultimately help us predict and control the spread of infections, as well as contribute to explanations for the persistence of cooperative genotypes in natural populations.

Type
Research Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
Copyright © The Author(s), 2023. Published by Cambridge University Press

Introduction

To be successful, pathogens must be able to compete to colonize a host and transmit between new hosts (Anderson and May, Reference Anderson and May1986). Theory has highlighted the trade-offs that can arise between these two levels as a result of counterbalancing selective pressures within and between hosts (Anderson and May, Reference Anderson and May1982; Koella and Antia, Reference Koella and Antia1995; Walther and Ewald, Reference Walther and Ewald2004). Within the host, pathogens must balance replication and transmission to new hosts (Reece et al., Reference Reece, Ramiro and Nussey2009), in an analogous trade-off between reproduction and growth within multicellular organisms (Bell, Reference Bell1980; Clutton-Brock, Reference Clutton-Brock1984; Greischar et al., Reference Greischar, Mideo, Read and Bjørnstad2016). Studying pathogens at these two levels has mainly been theoretical (Anderson and May, Reference Anderson and May1986; Coombs et al., Reference Coombs, Gilchrist and Ball2007; Mideo et al., Reference Mideo, Alizon and Day2008; Handel and Rohani, Reference Handel and Rohani2015), leaving a data gap in disease ecology (Coombs et al., Reference Coombs, Gilchrist and Ball2007; Mideo et al., Reference Mideo, Alizon and Day2008; Handel and Rohani, Reference Handel and Rohani2015). Understanding this interplay is crucial for understanding the fitness and transmissibility of pathogens, which could help contribute to developing effective intervention strategies (Hellriegel, Reference Hellriegel2001; Handel and Rohani, Reference Handel and Rohani2015) for clinically important pathogens, such as Plasmodium sp. (Greischar et al., Reference Greischar, Mideo, Read and Bjørnstad2016) to those having major effects on ecosystems, such as the fungi Batrachochytrium dendrobatidis (Pedersen et al., Reference Pedersen, Jones, Nunn and Altizer2007; Voyles et al., Reference Voyles, Young, Berger, Campbell, WF, Dinudom, Cook, Webb, RA, LF and Speare2009; Kilpatrick et al., Reference Kilpatrick, Briggs and Daszak2010; Wilber et al., Reference Wilber, Knapp, Toothman and Briggs2017).

A pathogen rarely infects a host alone (Petney and Andrews, Reference Petney and Andrews1998; Pedersen and Fenton, Reference Pedersen and Fenton2007; Rynkiewicz et al., Reference Rynkiewicz, Pedersen and Fenton2015; Betts et al., Reference Betts, Rafaluk and King2016). The presence of coinfecting strains may alter the within-host dynamics of an individual pathogen (Mideo, Reference Mideo2009). For example, in the host, there may be competition for resources (Pedersen and Fenton, Reference Pedersen and Fenton2007; Mideo, Reference Mideo2009), including key nutrients such as iron (Ratledge and Dover, Reference Ratledge and Dover2000; Nairz et al., Reference Nairz, Schroll, Sonnweber and Weiss2010; Kramer et al., Reference Kramer, Özkaya and Kümmerli2019). These within-host interactions may in turn alter between-host dynamics, as the presence of competitors may mean host exploitation is optimal (Frank, Reference Frank1996; Alizon et al., Reference Alizon, de Roode and Michalakis2013) with reduced selection for transmission to secure a larger proportion of resources within the host (McKenzie and Bossert, Reference McKenzie and Bossert1998; Greischar et al., Reference Greischar, Mideo, Read and Bjørnstad2016).

Within-host interactions are of vital importance for understanding infection outcomes (Foster, Reference Foster2005; West et al., Reference West, Diggle, Buckling, Gardner and AS2007; Leggett et al., Reference Leggett, Brown and Reece2014; Rezzoagli et al., Reference Rezzoagli, Granato and Kümmerli2020). It has been well established that pathogens can interact cooperatively to successfully colonize a host, for example, via forming biofilms (Griffin et al., Reference Griffin, West and Buckling2004; Kreft, Reference Kreft2004; Foster, Reference Foster2005; Diggle et al., Reference Diggle, Griffin, Campbell and West2007b; West et al., Reference West, Diggle, Buckling, Gardner and AS2007). Social traits such as the production of public goods into the local environment (West et al., Reference West, Griffin, Gardner and Diggle2006, Reference West, Diggle, Buckling, Gardner and AS2007; Leggett et al., Reference Leggett, Brown and Reece2014) are frequently involved in these pathogen interactions. Public goods benefit all the cells in the local environment, but they are costly to produce and thus are susceptible to exploitation by pathogens which may utilize but not produce public goods (non-producers) (Velicer, Reference Velicer2003; West et al., Reference West, Diggle, Buckling, Gardner and AS2007). For example, the production of compounds known as siderophores that are used to bind to and uptake iron (Buckling et al., Reference Buckling, Harrison, Vos, MA, Gardner, SA and Griffin2007; Kramer et al., Reference Kramer, Özkaya and Kümmerli2019), benefitting all bacteria in the local area as iron, is often limited within a host (Ratledge and Dover, Reference Ratledge and Dover2000; Nairz et al., Reference Nairz, Schroll, Sonnweber and Weiss2010). The release of products such as siderophores is regulated by communication between pathogens using small autoinducer molecules in a process known as quorum sensing (QS) (Keller and Surette, Reference Keller and Surette2006; West et al., Reference West, Diggle, Buckling, Gardner and AS2007; Williams et al., Reference Williams, Winzer, Chan and Cámara2007; Rumbaugh et al., Reference Rumbaugh, Diggle, Watters, Ross-Gillespie, Griffin and SA2009). Non-producers for both siderophore production and QS have been shown to arise in infections (De Vos et al., Reference De Vos, De Chial, Cochez, Jansen, Tümmler and Meyer2001; Köhler et al., Reference Köhler, Buckling and van Delden2009; Jiricny et al., Reference Jiricny, Molin, Foster, SP, PD, Ghoul, Johansen, LA, Popat, SA and AS2014; Andersen et al., Reference Andersen, Marvig, Molin and Griffin2015). Yet when populations are sampled at random, non-producers are rare (Köhler et al., Reference Köhler, Buckling and van Delden2009; Andersen et al., Reference Andersen, Marvig, Molin and Griffin2015), suggesting that non-producers could be poor at between-host transmission even if they are effective at invading established infections. Non-producers have been shown to be able to invade in vitro (Griffin et al., Reference Griffin, West and Buckling2004; Diggle et al., Reference Diggle, Griffin, Campbell and West2007b) and in vivo (Rumbaugh et al., Reference Rumbaugh, Diggle, Watters, Ross-Gillespie, Griffin and SA2009). Compared to our understanding of how pathogens interact within a host, relatively little is known about how within-host processes contribute to variation in pathogen transmission between hosts (Brown et al., Reference Brown, West, Diggle and Griffin2009; Handel and Rohani, Reference Handel and Rohani2015; VanderWaal and Ezenwa, Reference VanderWaal and Ezenwa2016; Stephenson et al., Reference Stephenson, Young, Fox, Jokela, Cable and SE2017).

In this study, we use the well-established model bacterial pathogen, Pseudomonas aeruginosa (Griffin et al., Reference Griffin, West and Buckling2004; Buckling et al., Reference Buckling, Harrison, Vos, MA, Gardner, SA and Griffin2007; Diggle et al., Reference Diggle, Griffin, Campbell and West2007b) to investigate the role of public goods production on within-host colonization and between-host transmission. Each of the two non-producer strains we used was unable to produce a public good; one strain did not produce a type of siderophore, and the other was not able to quorum sense. Both of these traits are well-established for investigating cooperative interactions between bacterial cells (Griffin et al., Reference Griffin, West and Buckling2004) with consequences for virulence in the case of QS (Rumbaugh et al., Reference Rumbaugh, Diggle, Watters, Ross-Gillespie, Griffin and SA2009). We predicted that producer (potentially cooperative) strains would be better able to transmit even if they were outcompeted by exploitative non-producers (potential cheats). Investigating pathogen transmission between hosts can be logistically challenging as it requires large population sizes (Handel and Rohani, Reference Handel and Rohani2015). We thus used the model Caenorhabditis elegans as the host, enabling us to have large populations with natural between-host fecal–oral transmission (Kenney et al., Reference Kenney, Anderson, Williams, PD and LR2005; Diaz and Restif, Reference Diaz and Restif2014). We began by tracking the within-host dynamics of producers and non-producers, in single infections and coinfections, over time. We varied the order of exposure of the different types of pathogen to determine whether priority effects altered within-host interactions (Goodman and Ross, Reference Goodman and Ross1974; de Roode et al., Reference de Roode, Helinski, Anwar and Read2005; Jackson et al., Reference Jackson, Pleass, Cable, Bradley and Tinsley2006; Clay et al., Reference Clay, Dhir, Rudolf and Duffy2018). We then introduced infected nematodes into uninfected populations and measured rates of between-host transmission. We investigated whether differences in pathogen strain transmissibility were due to variation in host preference for ingesting a particular pathogen strain or in host shedding into the environment. Overall, our study demonstrates that, in contrast to expectations from in vitro competition assays (Griffin et al., Reference Griffin, West and Buckling2004; Diggle et al., Reference Diggle, Griffin, Campbell and West2007b; Kümmerli et al., Reference Kümmerli, Griffin, West, Buckling and Harrison2009), producer pathogens are superior to non-producers at within-host colonization and between-host transmission in this species interaction.

Materials and methods

Bacterial pathogen and nematode host

Caenorhabditis elegans is a nematode species whose natural diet is composed of microorganisms (Hope, Reference Hope1999). The gut of C. elegans can be colonized by a variety of microbes, including pathogens (Clark and Hodgkin, Reference Clark and Hodgkin2014). We used 2 strains of C. elegans N2 and CB5584 (mIs12 II). CB5584 express fluorescence in their pharynx making them distinguishable from N2 under a fluorescent microscope. We selected CB5584 as it enabled us to identify nematodes from different populations, those exposed to pathogens (N2) and pathogen-naive populations (CB5584) without any difference in pathogen susceptibility (Wang, Reference Wang2020). Nematodes were maintained at 20°C on a lawn of food [Escherichia coli (OP50)] on nematode growth medium (NGM) plates. To synchronize life cycles, nematodes were treated with bleach (NaClO and sodium hydroxide) which kills everything except unhatched eggs (Hope, Reference Hope1999). After bleaching, nematodes were synchronized overnight in M9 buffer and maintained for 2 days.

We exposed nematodes to the Gram-negative pathogen, P. aeruginosa, an opportunistic pathogen of plants and animals, including humans (Tan et al., Reference Tan, Mahajan-Miklos and Ausubel1999). On our selected media, P. aeruginosa is a slow killing pathogen of C. elegans (Tan et al., Reference Tan, Mahajan-Miklos and Ausubel1999). We used 3 strains of P. aeruginosa in our experiments with the same genetic background (PAO1 strain background). The ‘producer’ strain was: PAO1 WT::GFP (WT labelled with GFP, which we herein refer to as the producer) and 2 ‘non-producer’ strains: PAO1 ΔlasR::mCherry (QS non-producer labelled with mCherry, which we herein refer to as non-producer A); and PAO1 Δpvd::mCherry [siderophore (pyoverdine) non-producer strain labelled with mCherry, which we herein refer to as non-producer B] (Rezzoagli et al., Reference Rezzoagli, Granato and Kümmerli2019). The non-producer strains differed. Non-producer A lacked the ability to communicate with other bacteria via QS (Keller and Surette, Reference Keller and Surette2006; West et al., Reference West, Diggle, Buckling, Gardner and AS2007; Williams et al., Reference Williams, Winzer, Chan and Cámara2007; Rumbaugh et al., Reference Rumbaugh, Diggle, Watters, Ross-Gillespie, Griffin and SA2009) which also affects a variety of other traits (e.g. biofilm development; Williams et al., Reference Williams, Winzer, Chan and Cámara2007; Diggle et al., Reference Diggle, Griffin, Campbell and West2007b). Comparatively, non-producer B had only lacked the ability to produce the single siderophore pyoverdine (Buckling et al., Reference Buckling, Harrison, Vos, MA, Gardner, SA and Griffin2007; Visca et al., Reference Visca, Imperi and Lamont2007). Each strain had a visually distinct colony morphology which enabled colony counting in the 2-stage exposure experiment.

For our investigation of nematode preference, we also used 2 strains of Pseudomonas fluorescens: a producer (CHA0) and a non-producer (CHA019) of gacS defensive toxins (Jousset et al., Reference Jousset, Rochat, Péchy-Tarr, Keel, Scheu and Bonkowski2009). Caenorhabditis elegans have previously been shown to preferentially graze on the non-producer, CHA019 (Jousset et al., Reference Jousset, Rochat, Péchy-Tarr, Keel, Scheu and Bonkowski2009), and so we used it as a positive control. All bacteria were stored at −80°C in a 1:1 ratio of sample to 50% glycerol solution in cryotubes. Strains of Pseudomonas bacteria were grown overnight at 37°C in Lysogeny broth shaking at 200 r.p.m. OP50 was grown under the same conditions at 30°C.

Within-host colonization and dynamics

Part 1 (I): single exposure

Approximately 1000 nematodes at the L4 stage were transferred onto a lawn of either the producer, non-producer A, or non-producer B for 24 h. The plates were saturated with bacteria such that the nematodes had a continuous grazing source. For the first stage of the experiment, a sample of 4–5 nematodes were removed from the single pathogen treatment after 24 h and washed according to the droplet method (Ford et al., Reference Ford, Kao, Williams and King2016) (Fig. S1). Treatments for this experiment consisted of five biological replicates, and the whole experiment was replicated four times.

Part 1 (II): 2-stage exposure

The two-pathogen treatment involved the pathogen strain being switched after 12 h exposure, with an additional washing stage between transfers (see Fig. S1). We exposed nematodes to the pathogen treatments sequentially. Simultaneous exposure would have resulted in competition outside of the host, which we wanted to avoid. There were 4 different treatments according to the order of primary and secondary pathogen exposure: (i) producer to non-producer A, (ii) producer to non-producer B, (iii) non-producer A to producer and (iv) non-producer B to producer. This exposure method allowed us to investigate whether the order of exposure affected within-host interactions.

To obtain an estimate of pathogen load, we calculated the number of colony-forming units (CFUs) per nematode. We placed 4–5 clean nematodes in 90 μL of M9 in a 1 ml Eppendorf tube (containing microbeads). The tube was placed in a bead-beater for 1 min at 2800 rpm. After crushing, serial dilutions were plated onto Kings Broth (KB) media (Ghoul et al., Reference Ghoul, West, McCorkell, Z-B, JB and AS2016) and grown overnight at 30°C. The number of colonies was counted. Treatments for both stages of the experiment consisted of 5 biological replicates, and the whole experiment was replicated four times.

For details of an additional 2-stage exposure analysis, see Supplementary materials. In this analysis, we conduct time controls using the nematode food (OP50) and demonstrate that the time of exposure (i.e. 0 h or after 12 h) does not affect colonization ability of any of the pathogen types.

Between-host dynamics

Part 2: between-host transmission

To investigate between-host dynamics, we used nematodes from the within-host assay (see Fig. S1). After the nematodes' exposure in the first instance to a single pathogen (either non-producer or producer), and in the second stage exposure to a two-pathogen treatment, a sample of ten clean nematodes were transferred to a pathogen-naive population of GFP-labelled nematodes (see Fig. S1, part 2). After 24 h, we took 4–5 pathogen-naive nematodes from each plate to calculate pathogen load by counting the CFUs within nematodes. We were able to distinguish, and selectively pick, the pathogen-naive nematodes using a fluorescent microscope. The pathogen-naive worms were distinguished by their green pharynx.

Preference assay

To determine whether nematodes preferred to consume producers or non-producers, we conducted a preference assay. Bacterial cell density was measured at an absorbance of 600 nm (A600) and then standardized to a density of 1 using M9. We used these standardized cultures to make equidistant 20 μL spots on a 90 mm KB media (Ghoul et al., Reference Ghoul, West, McCorkell, Z-B, JB and AS2016) plate (see Fig. S3A). Each KB plate contained 1 spot of producer and a spot of either non-producer A, non-producer B or the control P. fluorescens (CHA0 or CHA019). We left the bacteria to dry and then incubated the plates overnight at 30°C . We introduced approximately 40 clean nematodes to the centre of to the prepared plates with equidistant producer and an alternative pathogen (non-producer A, non-producer B, CHA019 or CHA0) [as in Abada et al. (Reference Abada, Sung, Dwivedi, Park, Lee and Ahnn2009)]. We recorded the approximate time of bacteria drying as 0 h and left the plates for 6 h [by this time nematodes are likely to have established their preference (Shtonda and Avery, Reference Shtonda and Avery2006; Ballestriero et al., Reference Ballestriero, Nappi, Zampi, Bazzicalupo, Di Schiavi and Egan2016)]. Treatments consisted of six biological replicates and the whole experiment was replicated five times. After 6 h, we recorded the number of nematodes on the producer, non-producer, or neither colony.

Host shedding of pathogens into the environment assay

To investigate how many pathogens were shed from the nematode host into the environment, we exposed nematodes to either a producer or non-producer P. aeruginosa (non-producer A or B) for 12 h. These exposed nematodes were cleaned and transferred to an empty NGM plate (with a minimal lawn of OP50). After 12 h, these nematodes were picked off the plate and the pathogen cells liberated using M9 buffer. The bacteria from the plate were then grown and counted for comparison (Fig. S3B). Pathogen colonies were phenotypically distinguishable from OP50.

Statistical analysis

All of the statistical analysis and data presentation was carried out in R version 3.6.2 (R Core Team, 2019) using RStudio (RStudio Team, 2021) and the packages ‘dplyr’ (Wickham et al., Reference Wickham, Francois, Henry and Muller2017), ‘ggplot2’ (Wickham, Reference Wickham2009), ‘multcomp’ (Hothorn et al., Reference Hothorn, Bretz and Westfall2008), ‘cowplot’ (Wilke, Reference Wilke2020), ‘stargazer’ (Hlavac, Reference Hlavac2018), ‘broom’ (Robinson et al., Reference Robinson, Hayes and Couch2021), ‘lme4’ (Bates et al., Reference Bates, Malcher, Bolker and Walker2015) and ‘lmerTest’ (Kuznetsova et al., Reference Kuznetsova, Brockhoff and Christensen2017). Results were considered to be statistically significant when P < 0.05.

Within-host colonization and dynamics part 1 (I): single exposure

We compared pathogen loads within hosts exposed to either a non-producer or producer. We fit a linear model with ‘CFU per nematode’ as the response variable and ‘pathogen’ [3 treatments: (i) producer, (ii) non-producer A and (iii) non-producer B] as the explanatory variable. We then carried out an ANOVA with this model and ran post-hoc Tukey tests.

Within-host colonization and dynamics part 1 (II): 2-stage exposure

When nematodes were exposed to both a non-producer and producer [4 ‘pathogen’ treatments, written in order of exposure: (i) producer to non-producer A, (ii) producer to non-producer B, (iii) non-producer A to producer and (iv) non-producer B to producer], we fit a quasi-Poisson generalized linear model (GLM) to compare pathogen loads (with either ‘non-producer CFU per nematode’ or ‘producer CFU per nematode’ as the response variable and ‘pathogen’ as the explanatory variable). To assess the significance of ‘pathogen’, we carried out a likelihood ratio test with this model and a second model from which the ‘pathogen’ term had been dropped. We then ran post-hoc Tukey tests using the ‘glht()’ function from the multcomp package (Hothorn et al., Reference Hothorn, Bretz and Westfall2008) to assess pairwise differences.

Between-host dynamics part 2: between-host transmission

To investigate between-host dynamics within the pathogen-naive nematode populations (introduced to nematodes that had been singly infected with either a producer or a non-producer), we compared pathogen loads across treatments. We fit a linear model with ‘CFU per nematode’ as the response variable and ‘pathogen’ [3 treatments: (i) producer, (ii) non-producer A and (iii) non-producer B] as the explanatory variable. We carried out an ANOVA to calculate F ratios for the explanatory variable ‘pathogen’ and ran post-hoc Tukey tests. To compare the pathogen loads from the pathogen-naive populations, where the introduced infected nematodes had been exposed to both producers and non-producers [4 ‘pathogen’ treatments, written in order of exposure: (i) producer to non-producer A, (ii) producer to non-producer B, (iii) non-producer A to producer and (iv) non-producer B to producer], we fit a quasi-Poisson GLM. For the GLM, the response variable was either the pathogen load of non-producers (‘non-producer CFU per nematode’) or that of the producer (‘producer CFU per nematode’) and ‘pathogen’ as the explanatory variable. To assess the significance of the explanatory variable ‘pathogen’, we carried out a likelihood ratio test with this model and a second model from which the ‘pathogen’ term had been dropped. We then ran post-hoc Tukey tests.

Preference assay and host shedding of pathogens into the environment assay

To investigate whether nematodes displayed a preference for either producers or non-producers, we calculated a choice index:

$${\rm Choice\;index} = \displaystyle{{{\rm Number\;of\;nematodes\;in\;producer\;colony}-{\rm number\;of\;nematodes\;in\;alternative\;colony}} \over {{\rm total\;number\;of\;nematodes\;}}}$$

where a value of 1 indicates complete preference for the producer, 0 indicates a lack of preference and −1 indicates complete preference for the alternative strain (all non-producers except for CHA0). We tested whether the choice indexes were significantly different from zero (indicating no preference) using 1-sample t-tests. Finally, to compare the number of CFUs present on the lawn of a plate after an infected population had been removed, we fit a quasi-Poisson GLM with ‘CFU per nematode’ as the response variable and ‘pathogen’ as the explanatory variable. We conducted a likelihood ratio test with this model and a second model from which the ‘pathogen’ term had been dropped and ran post-hoc Tukey tests between the pathogen treatments.

Results

Within-host dynamics: producers are better than non-producers at colonizing nematode hosts

Part 1 (I): single exposure

The producer was better able to colonize the nematode host than both non-producers, as the pathogen load (CFUs per nematode) was significantly higher for producers than non-producer A or B (post-hoc Tukey tests; non-producer A–producer: mean difference = −11 200, P < 0.001; non-producer B–producer: mean difference = −8870, P < 0.01, see Fig. 1, Table S1). There was no difference between the pathogen loads for nematodes exposed to non-producer A or B (post-hoc Tukey test; non-producer B–non-producer A: mean difference = −2336, P = 0.19, Fig. 1, Table S1), but overall, there was a significant effect of ‘pathogen’ treatment (F 2,57 = 39.8, P < 0.001, Table S1, Fig. 1).

Figure 1. Within-host colonization. Difference in the pathogen load, measured by the number of colony-forming units (CFUs) per nematode, after exposure to one of the three strains of P. aeruginosa. Treatments with different letters are significantly different. Square points with error bars represent mean ±1 s.e.

Part 1 (II): 2-stage exposure

When nematodes were exposed to both producers and non-producers, producers colonized nematodes at a similar level across pathogen treatments (no effect of treatment: likelihood ratio: deviance = 2500, P = 0.365, Fig. 2, Table S2B). There was a significant effect of pathogen treatment for non-producer CFUs (deviance = 100 414, P < 0.001, Fig. 2, Table S2A). The pathogen load of both non-producer B treatments (producer to non-producer B and non-producer B to producer) was significantly higher than both non-producer A treatments (producer to non-producer A and non-producer A to producer), regardless of the order of exposure, with non-producer B to producer having a significantly higher number of CFUs per nematode than all the other treatments (Fig. 2, Table S2A).

Figure 2. Within-host colonization and dynamics of co-infecting producer and non-producer pathogens. Difference in the producer (white) and non-producer (black) pathogen loads, measured by the number of colony-forming units (CFU) per nematode, after co-exposure to two pathogens (producer and non-producer A or non-producer B). The x-axis labels are given in order of exposure. Points with different letters are significantly different from each other. Square points with error bars represent mean ±1 s.e.

Between-host dynamics: producers are better at between-host transmission than non-producers

Part 2: between-host transmission

When nematodes infected by asingle pathogen strain were introduced to the naive population, the producer pathogens spread best (F 2,57 = 7.73, P = 0.001, post-hoc Tukey tests; producer to non-producer A: mean difference = −3440, P = 0.030; producer to non-producer B: mean difference = −5040, P = 0.0009, see Fig. 3A, Table S5).

Figure 3. Between-host dynamics of producer and non-producer pathogens. (A) Difference in the pathogen load (CFUs per nematode) from the naive population after singly-infected nematodes were introduced. (B) Difference in the number of producers (white) and non-producers (black) in the colony-forming units (per nematode), from the naive population after co-infected nematodes were introduced. The x-axis labels are given in order of exposure. Points with different letters are statistically significantly different. Square points with error bars represent mean ±1 s.e.

When nematodes were co-infected by producers and non-producers, the pathogen load of producer in the pathogen-naive populations of nematodes remained consistently high (Fig. 3B). Although pathogen loads were similar across treatments, there was a significant effect of ‘pathogen’ (likelihood ratio test: ‘producer’ deviance = 11 100, P = 0.01, Table S6B) likely driven by the statistically significant difference between the loads of the producer to non-producer B and non-producer A to producer treatments (Tukey post-hoc test of difference: mean of ‘non-producer A to producer’–‘producer to non-producer B’ = 0.358, P = 0.026). The non-producer pathogen loads of nematodes were low and close to zero across treatments (Fig. 3B), except for the non-producer B to producer treatment where there was a significantly higher number of CFUs per nematodes than all the other types of non-producer (Table S6). This higher number of CFUs per nematode for non-producer B to producer treatment resulted in a significant effect of ‘pathogen’ (likelihood ratio test: ‘non-producer’ deviance = 94 200, P < 0.001).

Preference assay

Caenorhabditis elegans did not display a preference for either the non-producer or producer strains of P. aeruginosa (see Fig. 4A, Table S7A). The choice index was not significantly different from zero for either producer vs non-producer A (mean choice index = 0.0468, t = 0.733, P = 0.45) or producer vs non-producer B (mean choice index = −0.0333, t = −0.683, P = 0.5). As a positive control, we found C. elegans showed a preference for the non-producer P. fluorescens strain CHA019 (mean choice index = −0.405, t = −12.28, P < 0.001, Fig. 4B) as in Jousset et al. (Reference Jousset, Rochat, Péchy-Tarr, Keel, Scheu and Bonkowski2009). There was no preference for the producer P. protegens strain CHA0 (mean choice index = 0.00641, t = 0.188, P = 0.85, Fig. 4B).

Figure 4. Host preference for picking-up pathogens and host shedding of pathogens in the environment. (A) and (B) Choice index of C. elegans for producer and non-producer strains of P. aeruginosa. Where 1 indicates complete preference for the producer, 0 indicates a lack of preference for either and −1 indicates complete preference for the alternative strain (non-producer A, non-producer B, CHAO19 and CHA0). Figure (A) shows the choice index for the two focal non-producer strains non-producer A and non-producer B in comparison to the producer whereas (B) shows the choice index for P. fluorescens in comparison to the producer. * Indicates significance. (C) Difference in the number of colony-forming units (CFUs) present on a lawn after 12 h of exposure to infected nematodes. Each of the 3 points is statistically significantly different from each other denoted by different letters. Square points with error bars represent mean ±1 s.e.

Host shedding of pathogens into the environment assay

Nematodes shed significantly more producers into the environment than either type of non-producer (overall effect of ‘pathogen’ likelihood ratio test: deviance = 64 100, P < 0.001; post-hoc Tukey tests; producer–non-producer A: difference = −0.825, P < 0.001; non-producer B–producer: difference = −0.284, P = 0.007, Fig. 4C, Table S7B). There was also a significant difference between the number of CFUs present on a lawn between the two non-producer strains. More non-producer B pathogens were shed into the environment than non-producer A (non-producer B–non-producer A = 0.541, P < 0.001, Fig. 4C, Table S7B).

Discussion

We revealed that public-good producers showed superior ability to establish infection within- and between-nematode hosts compared to non-producers. There were consistently more producers infecting nematodes when the hosts were directly exposed to the pathogens as well as when pathogens were able to spread naturally between hosts. Non-producers were poor at both within-host colonization and between-host transmission, even when coinfecting hosts with producers. Our results suggest that a higher pathogen load for producers is related to an increase in their ability to transmit between hosts. This positive relationship between pathogen load and transmissibility is a common assumption in theoretical studies (see Handel and Rohani, Reference Handel and Rohani2015 and references therein), but with few empirical examples (guppy [Poecilia reticulata] ectoparasite [Gyrodactylus turnbulli] system in Stephenson et al., Reference Stephenson, Young, Fox, Jokela, Cable and SE2017).

The counterbalancing selection pressures experienced by pathogens at the level of within-host colonization and between-host transmission can lead to trade-offs (Anderson and May, Reference Anderson and May1982; Koella and Antia, Reference Koella and Antia1995; Walther and Ewald, Reference Walther and Ewald2004). Within a host, the ability to reproduce rapidly may be advantageous to outcompete competitors. However, pathogens that reproduce more slowly may be able to persist for longer periods in the external environment. This ability could be a beneficial trait for transmission, but disadvantageous for colonization (Walther and Ewald, Reference Walther and Ewald2004). These trade-offs can be affected by multi-species interactions within a host (Mideo, Reference Mideo2009; Alizon et al., Reference Alizon, de Roode and Michalakis2013), and by transmission mode (Walther and Ewald, Reference Walther and Ewald2004; Antonovics et al., Reference Antonovics, Wilson, Forbes, HC, ER, HC, Longdon, Okamura, SM and JP2017). Counter to our expectations, we do not find evidence for an existing trade-off between within-host colonization and transmissibility for producer pathogens.

We predicted that in the absence of producers, non-producers would be less able to colonize the host. Non-producers lack the ability to either produce iron-scavenging siderophores (non-producer B [pyoverdine]) (Buckling et al., Reference Buckling, Harrison, Vos, MA, Gardner, SA and Griffin2007) or induce the las QS pathway (non-producer A) (Keller and Surette, Reference Keller and Surette2006; West et al., Reference West, Diggle, Buckling, Gardner and AS2007; Diggle et al., Reference Diggle, Griffin, Campbell and West2007b, Reference Diggle, Gardner, West and Griffin2007a). Non-producer A was relatively poor at colonizing and transmitting between hosts compared to non-producer B, an outcome likely due to the more severe fitness consequences experienced by non-producer A than non-producer B. Non-producer A is unable to communicate with other pathogens via QS (Keller and Surette, Reference Keller and Surette2006; Venturi, Reference Venturi2006). This is a crucial trait to the success of P. aeruginosa that controls behaviours, such as biofilm development and the production of virulence factors (Williams et al., Reference Williams, Winzer, Chan and Cámara2007; Diggle et al., Reference Diggle, Griffin, Campbell and West2007b). While non-producer B does not produce the primary siderophore pyoverdine (Buckling et al., Reference Buckling, Harrison, Vos, MA, Gardner, SA and Griffin2007; Visca et al., Reference Visca, Imperi and Lamont2007), which can negatively impact the fitness of the strain in an iron-limited host environment (Ratledge and Dover, Reference Ratledge and Dover2000; Nairz et al., Reference Nairz, Schroll, Sonnweber and Weiss2010), it can produce other siderophores and can take up iron from the environment in other ways (Buckling et al., Reference Buckling, Harrison, Vos, MA, Gardner, SA and Griffin2007; Visca et al., Reference Visca, Imperi and Lamont2007). In addition, nematode hosts did not preferentially consume pathogenic producers over non-producers. There was no difference in the intake of pathogen type. More producers, however, were shed into the local environment than non-producers, making them more successful at between-host transmission than non-producers.

Even in the presence of producers, non-producers were less able to colonize hosts and transmit between them. This inability of non-producer strains to exploit producers (i.e. their inability to cheat effectively) has previously been found in in vivo studies using nematode hosts (Rezzoagli et al., Reference Rezzoagli, Granato and Kümmerli2019), as well as in larvae of the wax moth (Galleria mellonella) (Harrison et al., Reference Harrison, Browning, Vos and Buckling2006) and the diamondback moth (Plutella xylostella) (Zhou et al., Reference Zhou, Slamti, Nielsen-LeRoux, Lereclus and Raymond2014). We expect that this outcome is likely due to several factors. Firstly, within the nematode gut, there is a relatively low pathogen density (Rezzoagli et al., Reference Rezzoagli, Granato and Kümmerli2019). Non-producers are most likely to benefit from producers when they exist at a low density (Ross-Gillespie et al., Reference Ross-Gillespie, Gardner, West and Griffin2007; Rumbaugh et al., Reference Rumbaugh, Diggle, Watters, Ross-Gillespie, Griffin and SA2009) but within a high density of producers (Ross-Gillespie et al., Reference Ross-Gillespie, Gardner, Buckling, SA and AS2009), in a negative-frequency dependent interaction. Secondly, the spatial heterogeneity within the host may not be conducive to cheating (Harrison et al., Reference Harrison, Browning, Vos and Buckling2006; Leggett et al., Reference Leggett, Brown and Reece2014; Rezzoagli et al., Reference Rezzoagli, Granato and Kümmerli2019). The in vitro environment is more homogenous (Pedersen and Fenton, Reference Pedersen and Fenton2007; Mideo, Reference Mideo2009), allowing non-producers to mix with producers and potentially utilize the products released into the environment (Griffin et al., Reference Griffin, West and Buckling2004; Diggle et al., Reference Diggle, Griffin, Campbell and West2007b; Kümmerli et al., Reference Kümmerli, Griffin, West, Buckling and Harrison2009). Whereas in vivo, the environment is likely to have more structure, preventing mixing. Therefore, within the host, non-producers may be more likely to be surrounded by their non-producer relatives (Frank, Reference Frank1998), and thus will be less able to directly benefit from the public goods of the producers (Harrison et al., Reference Harrison, Browning, Vos and Buckling2006; West et al., Reference West, Griffin, Gardner and Diggle2006; Rezzoagli et al., Reference Rezzoagli, Granato and Kümmerli2019). Finally, the nematode host itself may impact the non-producer's colonization ability; limited iron availability may remove any benefit of not producing the costly siderophores (Ratledge and Dover, Reference Ratledge and Dover2000; Nairz et al., Reference Nairz, Schroll, Sonnweber and Weiss2010).

Understanding how social traits affect within- and between-host dynamics requires further experiments (Mideo et al., Reference Mideo, Alizon and Day2008; Handel and Rohani, Reference Handel and Rohani2015). Our study, among others (Diaz and Restif, Reference Diaz and Restif2014), highlights the benefits of C. elegans as a model host for studying between-host dynamics without major logistical challenges (Handel and Rohani, Reference Handel and Rohani2015). A future avenue for exploration within this system could involve experimentally evolving non-producers de novo within the nematode that can successfully cheat (Ghoul et al., Reference Ghoul, Griffin and West2014) to determine how within-host cheating impacts pathogen transmissibility. Cheats have been shown to evolve in natural populations, for example, QS cheats are found in the lungs of cystic fibrosis patients (Diggle et al., Reference Diggle, Gardner, West and Griffin2007a, Reference Diggle, Griffin, Campbell and West2007b). Successful within-host cheating could negatively impact the transmission dynamics of an infection and could be explored as a potential disease intervention strategy (Brown et al., Reference Brown, West, Diggle and Griffin2009; Jiricny et al., Reference Jiricny, Molin, Foster, SP, PD, Ghoul, Johansen, LA, Popat, SA and AS2014; Leggett et al., Reference Leggett, Brown and Reece2014).

We suggest that within-host pathogen interactions affect between-host infection dynamics. We provide empirical evidence linking processes occurring at different scales, in a field dominated by theory (Coombs et al., Reference Coombs, Gilchrist and Ball2007; Mideo et al., Reference Mideo, Alizon and Day2008; Handel and Rohani, Reference Handel and Rohani2015), investigating the role of pathogenic social traits important in disease. Taking a multilevel experimental approach to within- and between-host dynamics is an outstanding and major challenge within evolutionary biology (Mideo et al., Reference Mideo, Alizon and Day2008). Addressing this challenge will improve our ability to predict and control infection in less well-understood systems, such as disease-induced population extinctions (Pedersen et al., Reference Pedersen, Jones, Nunn and Altizer2007; Smith et al., Reference Smith, Acevedo-Whitehouse and Pedersen2009; Wilber et al., Reference Wilber, Knapp, Toothman and Briggs2017) and may also allow us to harness pathogen interactions for our own benefit (Smith and Holt, Reference Smith and Holt1996; Mideo, Reference Mideo2009; Leggett et al., Reference Leggett, Brown and Reece2014; Rezzoagli et al., Reference Rezzoagli, Granato and Kümmerli2020).

Supplementary material

The supplementary material for this article can be found at https://doi.org/10.1017/S0031182023000586.

Data availability

The data and code from this study have been uploaded with the supplementary material.

Acknowledgements

We are grateful to both R. Kümmerli and A. Jousset for the gift of the P. aeruginosa and P. fluorescens strains. We thank S. West and A. Pedersen for their useful comments on an earlier draft of the manuscript. We also thank C. Woodham for his advice with the statistical analysis.

Author contributions

V. L. P., K. C. K. and A. S. G. conceived and designed the study. V. L. P. performed the experiments and analysed the data, with guidance from K. C. K. V. L. P. and E. J. S. wrote the manuscript, with guidance from K. C. K. All authors have approved the manuscript.

Financial support

V. L. P. was supported by DPhil funding from the Biotechnology and Biological Sciences Research Council [BB/M011224/1]. K. C. K. is supported by an ERC Starting Grant (COEVOPRO 802242).

Competing interests

None.

Ethical standards

Not applicable

References

Abada, EAE, Sung, H, Dwivedi, M, Park, BJ, Lee, SK and Ahnn, J (2009) C. elegans behavior of preference choice on bacterial food. Molecules and Cells 28, 209213.CrossRefGoogle ScholarPubMed
Alizon, S, de Roode, JC and Michalakis, Y (2013) Multiple infections and the evolution of virulence. Ecology Letters 16, 556567.CrossRefGoogle ScholarPubMed
Andersen, SB, Marvig, RL, Molin, S and Griffin, AS (2015) Long-term social dynamics drive loss of function in pathogenic bacteria. Proceedings of the National Academy of Sciences of the USA 112, 10756.CrossRefGoogle ScholarPubMed
Anderson, R and May, R (1982) Coevolution of hosts and parasites. Parasitology 85, 411426.CrossRefGoogle ScholarPubMed
Anderson, RM and May, RM (1986) The invasion, persistence and spread of infectious diseases within animal and plant communities. Philosophical transactions of the Royal Society of London Series B, Biological sciences 314, 533570.Google ScholarPubMed
Antonovics, J, Wilson, AJ, Forbes, MR, HC, Hauffe, ER, Kallio, HC, Leggett, Longdon, B, Okamura, B, SM, Sait and JP, Webster (2017) The evolution of transmission mode. Philosophical Transactions of the Royal Society B: Biological Sciences 372, 20160083.Google ScholarPubMed
Ballestriero, F, Nappi, J, Zampi, G, Bazzicalupo, P, Di Schiavi, E and Egan, S (2016) Caenorhabditis elegans employs innate and learned aversion in response to bacterial toxic metabolites tambjamine and violacein. Scientific Reports 6, 29284.CrossRefGoogle ScholarPubMed
Bates, D, Malcher, M, Bolker, B and Walker, S (2015) Fitting linear mixed-effects models using {lme4}. Journal of Statistical Software 67, 148.CrossRefGoogle Scholar
Bell, G (1980) The costs of reproduction and their consequences. The American Naturalist 116, 4576.CrossRefGoogle Scholar
Betts, A, Rafaluk, C and King, KC (2016) Host and parasite evolution in a tangled bank. Trends in Parasitology 32, 863873.CrossRefGoogle Scholar
Brown, SP, West, SA, Diggle, SP and Griffin, AS (2009) Social evolution in micro-organisms and a Trojan horse approach to medical intervention strategies. Philosophical Transactions of the Royal Society of London B 364, 31573168.CrossRefGoogle Scholar
Buckling, A, Harrison, F, Vos, M, MA, Brockhurst, Gardner, A, SA, West and Griffin, A (2007) Siderophore-mediated cooperation and virulence in Pseudomonas aeruginosa. FEMS Microbiology Ecology 62, 135141.Google ScholarPubMed
Clark, LC and Hodgkin, J (2014) Commensals, probiotics and pathogens in the C aenorhabditis elegans model. Cellular Microbiology 16, 2738.CrossRefGoogle Scholar
Clay, PA, Dhir, K, Rudolf, VHW and Duffy, MA (2018) Within-host priority effects systematically alter pathogen coexistence. The American Naturalist 193, 187199.Google ScholarPubMed
Clutton-Brock, TH (1984) Reproductive effort and terminal investment in iteroparous animals. The American Naturalist 123, 212229.Google Scholar
Coombs, D, Gilchrist, MA and Ball, CL (2007) Evaluating the importance of within- and between-host selection pressures on the evolution of chronic pathogens. Theoretical Population Biology 72, 576591.CrossRefGoogle ScholarPubMed
de Roode, JC, Helinski, MEH, Anwar, MA and Read, AF (2005) Dynamics of multiple infection and within-host competition in genetically diverse malaria infections. The American Naturalist 166, 531542.CrossRefGoogle ScholarPubMed
De Vos, D, De Chial, M, Cochez, C, Jansen, S, Tümmler, B and Meyer, JM (2001) Study of pyoverdine type and production by Pseudomonas aeruginosa isolated from cystic fibrosis patients: prevalence of type II pyoverdine isolates and accumulation of pyoverdine-negative mutations. Archives of Microbiology 175, 384388.CrossRefGoogle ScholarPubMed
Diaz, SA and Restif, O (2014) Spread and transmission of bacterial pathogens in experimental populations of the nematode Caenorhabditis elegans. Applied and Environmental Microbiology 80, 54115418.CrossRefGoogle ScholarPubMed
Diggle, SP, Gardner, A, West, SA and Griffin, AS (2007a) Evolutionary theory of bacterial quorum sensing: when is a signal not a signal? Philosophical Transactions of the Royal Society B: Biological Sciences 362, 12411249.CrossRefGoogle Scholar
Diggle, SP, Griffin, AS, Campbell, GS and West, SA (2007b) Cooperation and conflict in quorum-sensing bacterial populations. Nature 450, 411414.CrossRefGoogle ScholarPubMed
Ford, SA, Kao, D, Williams, D and King, KC (2016) Microbe-mediated host defence drives the evolution of reduced pathogen virulence. Nature Communications 7, 13430.CrossRefGoogle ScholarPubMed
Foster, KR (2005) Hamiltonian medicine: why the social lives of pathogens matter. Science 308, 12691270.CrossRefGoogle ScholarPubMed
Frank, SA (1996) Models of parasite virulence. The Quarterly Review of Biology 71, 3778.Google ScholarPubMed
Frank, S (1998) Foundations of Social Evolution. Princeton University Press.CrossRefGoogle Scholar
Ghoul, M, Griffin, AS and West, SA (2014) Toward an evolutionary definition of cheating. Evolution 68, 318331.CrossRefGoogle ScholarPubMed
Ghoul, M, West, SA, McCorkell, FA, Z-B, Lee, JB, Bruce and AS, Griffin (2016) Pyoverdin cheats fail to invade bacterial populations in stationary phase. Journal of Evolutionary Biology 29, 17281736.Google ScholarPubMed
Goodman, RM and Ross, AF (1974) Enhancement by potato virus Y of potato virus X synthesis in doubly infected tobacco depends on the timing of invasion by the viruses. Virology 58, 263271.CrossRefGoogle ScholarPubMed
Greischar, MA, Mideo, N, Read, AF and Bjørnstad, ON (2016) Predicting optimal transmission investment in malaria parasites. Evolution 70, 15421558.CrossRefGoogle ScholarPubMed
Griffin, AS, West, SA and Buckling, A (2004) Cooperation and competition in pathogenic bacteria. Letters to Nature 430, 10241027.Google ScholarPubMed
Handel, A and Rohani, P (2015) Crossing the scale from within-host infection dynamics to between-host transmission fitness: a discussion of current assumptions and knowledge. Philosophical Transactions of the Royal Society B: Biological Sciences 370, 20140302.CrossRefGoogle ScholarPubMed
Harrison, F, Browning, LE, Vos, M and Buckling, A (2006) Cooperation and virulence in acute Pseudomonas aeruginosa infections. BMC Biology 4, Article number 21. https://doi.org/10.1186/1741-7007-4-21CrossRefGoogle ScholarPubMed
Hellriegel, B (2001) Immunoepidemiology – bridging the gap between immunology and epidemiology. Trends in Parasitology 17, 102106.CrossRefGoogle ScholarPubMed
Hlavac, M (2018) Stargazer: well-formatted regression and summary statistics tables. Central European Labour Studies Institute (CELSI).Google Scholar
Hope, IA (1999) C. elegans: A Practical Approach. Oxford: Oxford University Press.Google Scholar
Hothorn, T, Bretz, F and Westfall, P (2008) Simultaneous inference in general parametric models. Biometrical Journal 50, 346363.CrossRefGoogle ScholarPubMed
Jackson, JA, Pleass, RJ, Cable, J, Bradley, JE and Tinsley, RC (2006) Heterogenous interspecific interactions in a host–parasite system. International Journal for Parasitology 36, 13411349.CrossRefGoogle Scholar
Jiricny, N, Molin, S, Foster, K, SP, Diggle, PD, Scanlan, Ghoul, M, Johansen, Krogh H, LA, Santorelli, Popat, R, SA, West and AS, Griffin (2014) Loss of social behaviours in populations of Pseudomonas aeruginosa infecting lungs of patients with cystic fibrosis. PLoS ONE 9, e83124.Google ScholarPubMed
Jousset, A, Rochat, L, Péchy-Tarr, M, Keel, C, Scheu, S and Bonkowski, M (2009) Predators promote defence of rhizosphere bacterial populations by selective feeding on non-toxic cheaters. ISME Journal 3, 666674.Google ScholarPubMed
Keller, L and Surette, MG (2006) Communication in bacteria: an ecological and evolutionary perspective. Nature Reviews Microbiology 4, 249258.CrossRefGoogle ScholarPubMed
Kenney, SJ, Anderson, GL, Williams, PL, PD, Millner and LR, Beuchat (2005) Persistence of Escherichia coli O157:H7, Salmonella Newport, and Salmonella Poona in the gut of a free-living nematode, Caenorhabditis elegans, and transmission to progeny and uninfected nematodes. International Journal of Food Microbiology 101, 227236.CrossRefGoogle ScholarPubMed
Kilpatrick, AM, Briggs, CJ and Daszak, P (2010) The ecology and impact of chytridiomycosis: an emerging disease of amphibians. Trends in Ecology & Evolution 25, 109118.CrossRefGoogle ScholarPubMed
Koella, JC and Antia, R (1995) Optimal pattern of replication and transmission for parasites with two stages in their life cycle. Theoretical Population Biology 47, 277291.Google Scholar
Köhler, T, Buckling, A and van Delden, C (2009) Cooperation and virulence of clinical Pseudomonas aeruginosa populations. Proceedings of the National Academy of Sciences of the USA 106, 6339.CrossRefGoogle ScholarPubMed
Kramer, J, Özkaya, Ö and Kümmerli, R (2019) Bacterial siderophores in community and host interactions. Nature Reviews Microbiology 18, 152–163 https://doi.org/10.1038/s41579-019-0284-4Google ScholarPubMed
Kreft, J-U (2004) Biofilms promote altruism. Microbiology 150, 2751–2760. https://doi.org/10.1099/mic.0.26829-0Google ScholarPubMed
Kümmerli, R, Griffin, AS, West, SA, Buckling, A and Harrison, F (2009) Viscous medium promotes cooperation in the pathogenic bacterium Pseudomonas aeruginosa. Proceedings of the Royal Society B: Biological Sciences 276, 35313538.CrossRefGoogle ScholarPubMed
Kuznetsova, A, Brockhoff, P and Christensen, R (2017) {lmerTest} package: tests in linear mixed effects models. Journal of Statistical Software 82, 126.CrossRefGoogle Scholar
Leggett, HC, Brown, SP and Reece, SE (2014) War and peace: social interactions in infections. Philosophical Transactions of the Royal Society B: Biological Sciences 369, 20130365.Google ScholarPubMed
McKenzie, FE and Bossert, WH (1998) The optimal production of gametocytes by Plasmodium falciparum. Journal of Theoretical Biology 193, 419428.CrossRefGoogle ScholarPubMed
Mideo, N (2009) Parasite adaptations to within-host competition. Trends in Parasitology 25, 261268.Google ScholarPubMed
Mideo, N, Alizon, S and Day, T (2008) Linking within- and between-host dynamics in the evolutionary epidemiology of infectious disease. Trends in Ecology & Evolution 23, 511–517. https://doi.org/doi:10.1016/j.tree.2008.05.009CrossRefGoogle Scholar
Nairz, M, Schroll, A, Sonnweber, T and Weiss, G (2010) The struggle for iron – a metal at the host–pathogen interface. Cellular Microbiology 12, 16911702.Google Scholar
Pedersen, AB and Fenton, A (2007) Emphasizing the ecology in parasite community ecology. Trends in Ecology & Evolution 22, 133139.CrossRefGoogle ScholarPubMed
Pedersen, AB, Jones, KE, Nunn, CL and Altizer, S (2007) Infectious diseases and extinction risk in wild mammals. Conservation Biology 21, 12691279.Google ScholarPubMed
Petney, TN and Andrews, RH (1998) Multiparasite communities in animals and humans: frequency, structure and pathogenic significance. International Journal for Parasitology 28, 377393.Google ScholarPubMed
Ratledge, C and Dover, LG (2000) Iron metabolism in pathogenic bacteria. Annual Review of Microbiology 54, 881941.CrossRefGoogle ScholarPubMed
R Core Team (2019) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.Google Scholar
Reece, SE, Ramiro, RS and Nussey, DH (2009) SYNTHESIS: plastic parasites: sophisticated strategies for survival and reproduction? Evolutionary Applications 2, 1123.Google Scholar
Rezzoagli, C, Granato, ET and Kümmerli, R (2019) In-vivo microscopy reveals the impact of Pseudomonas aeruginosa social interactions on host colonization. The ISME Journal 13, 24032414.CrossRefGoogle ScholarPubMed
Rezzoagli, C, Granato, ET and Kümmerli, R (2020) Harnessing bacterial interactions to manage infections: a review on the opportunistic pathogen Pseudomonas aeruginosa as a case example. Journal of Medical Microbiology 69, 147161.CrossRefGoogle ScholarPubMed
Robinson, D, Hayes, A and Couch, S (2021) Broom: Convert statistical objects into tidy tibbles.Google Scholar
Ross-Gillespie, A, Gardner, A, West, SA and Griffin, AS (2007) Frequency dependence and cooperation: theory and a test with Bacteria. The American Naturalist 170, 331342.CrossRefGoogle Scholar
Ross-Gillespie, A, Gardner, A, Buckling, A, SA, West and AS, Griffin (2009) Density dependence and cooperation: theory and a test with bacteria. Evolution 63, 23152325.Google Scholar
RStudio Team (2021) RStudio: integrated development environment for R. Version 1.4.1106. Boston. Available at http://www.rstudio.com/Google Scholar
Rumbaugh, KP, Diggle, SP, Watters, CM, Ross-Gillespie, A, Griffin, AS and SA, West (2009) Quorum sensing and the social evolution of bacterial virulence. Current Biology 19, 341345.CrossRefGoogle ScholarPubMed
Rynkiewicz, EC, Pedersen, AB and Fenton, A (2015) An ecosystem approach to understanding and managing within-host parasite community dynamics. Trends in Parasitology 31, 212221.CrossRefGoogle ScholarPubMed
Shtonda, BB and Avery, L (2006) Dietary choice behavior in Caenorhabditis elegans. Journal of Experimental Biology 209, 89102.CrossRefGoogle ScholarPubMed
Smith, VH and Holt, RD (1996) Resource competition and within-host disease dynamics. Trends in Ecology & Evolution 11, 386389.CrossRefGoogle ScholarPubMed
Smith, KF, Acevedo-Whitehouse, K and Pedersen, AB (2009) The role of infectious diseases in biological conservation. Animal Conservation 12, 112.Google Scholar
Stephenson, JF, Young, KA, Fox, J, Jokela, J, Cable, J and SE, Perkins (2017) Host heterogeneity affects both parasite transmission to and fitness on subsequent hosts. Philosophical Transactions of the Royal Society B: Biological Sciences 372, 20160093.CrossRefGoogle ScholarPubMed
Tan, M-W, Mahajan-Miklos, S and Ausubel, FM (1999) Killing of Caenorhabditis elegans by Pseudomonas aeruginosa used to model mammalian bacterial pathogenesis. Proceedings of the National Academy of Sciences 96, 715720.CrossRefGoogle ScholarPubMed
VanderWaal, KL and Ezenwa, VO (2016) Heterogeneity in pathogen transmission: mechanisms and methodology. Functional Ecology 30, 16061622.Google Scholar
Velicer, GJ (2003) Social strife in the microbial world. Trends in Microbiology 11, 330337.CrossRefGoogle ScholarPubMed
Venturi, V (2006) Regulation of quorum sensing in Pseudomonas. FEMS Microbiology Reviews 30, 274291.CrossRefGoogle ScholarPubMed
Visca, P, Imperi, F and Lamont, IL (2007) Pyoverdine siderophores: from biogenesis to biosignificance. Trends in Microbiology 15, 2230.CrossRefGoogle ScholarPubMed
Voyles, J, Young, S, Berger, L, Campbell, C, WF, Voyles, Dinudom, A, Cook, D, Webb, R, RA, Alford, LF, Skerratt and Speare, R (2009) Pathogenesis of chytridiomycosis, a cause of catastrophic amphibian declines. Science 326, 582.CrossRefGoogle ScholarPubMed
Walther, BA and Ewald, PW (2004) Pathogen survival in the external environment and the evolution of virulence. Biological Reviews of the Cambridge Philosophical Society 79, 849869.Google ScholarPubMed
Wang, D (2020) Exposure Toxicology in Caenorhabditis elegans. Springer Nature.CrossRefGoogle Scholar
West, SA, Griffin, AS, Gardner, A and Diggle, SP (2006) Social evolution theory for microorganisms. Nature Reviews Microbiology 4, 597607.Google ScholarPubMed
West, SA, Diggle, SP, Buckling, A, Gardner, A and AS, Griffin (2007) The social lives of microbes. Annual Review of Ecology, Evolution, and Systematics 38, 5377.CrossRefGoogle Scholar
Wickham, H (2009) Elegant Graphics for Data Analysis. New York: Springer-Verlag.CrossRefGoogle Scholar
Wickham, H, Francois, R, Henry, L and Muller, K (2017) A grammar of data manipulation. https://dplyr.tidyverse.org/Google Scholar
Wilber, MQ, Knapp, RA, Toothman, M and Briggs, CJ (2017) Resistance, tolerance and environmental transmission dynamics determine host extinction risk in a load-dependent amphibian disease. Ecology Letters 20, 11691181.Google Scholar
Wilke, CO (2020) cowplot: Streamlined plot theme and plot annotations for ‘ggplot2’. https://wilkelab.org/cowplot/Google Scholar
Williams, P, Winzer, K, Chan, WC and Cámara, M (2007) Look who's talking: communication and quorum sensing in the bacterial world. Philosophical Transactions of the Royal Society B: Biological Sciences 362, 11191134.CrossRefGoogle ScholarPubMed
Zhou, L, Slamti, L, Nielsen-LeRoux, C, Lereclus, D and Raymond, B (2014) The social biology of quorum sensing in a naturalistic host pathogen system. Current Biology 24, 24172422.Google Scholar
Figure 0

Figure 1. Within-host colonization. Difference in the pathogen load, measured by the number of colony-forming units (CFUs) per nematode, after exposure to one of the three strains of P. aeruginosa. Treatments with different letters are significantly different. Square points with error bars represent mean ±1 s.e.

Figure 1

Figure 2. Within-host colonization and dynamics of co-infecting producer and non-producer pathogens. Difference in the producer (white) and non-producer (black) pathogen loads, measured by the number of colony-forming units (CFU) per nematode, after co-exposure to two pathogens (producer and non-producer A or non-producer B). The x-axis labels are given in order of exposure. Points with different letters are significantly different from each other. Square points with error bars represent mean ±1 s.e.

Figure 2

Figure 3. Between-host dynamics of producer and non-producer pathogens. (A) Difference in the pathogen load (CFUs per nematode) from the naive population after singly-infected nematodes were introduced. (B) Difference in the number of producers (white) and non-producers (black) in the colony-forming units (per nematode), from the naive population after co-infected nematodes were introduced. The x-axis labels are given in order of exposure. Points with different letters are statistically significantly different. Square points with error bars represent mean ±1 s.e.

Figure 3

Figure 4. Host preference for picking-up pathogens and host shedding of pathogens in the environment. (A) and (B) Choice index of C. elegans for producer and non-producer strains of P. aeruginosa. Where 1 indicates complete preference for the producer, 0 indicates a lack of preference for either and −1 indicates complete preference for the alternative strain (non-producer A, non-producer B, CHAO19 and CHA0). Figure (A) shows the choice index for the two focal non-producer strains non-producer A and non-producer B in comparison to the producer whereas (B) shows the choice index for P. fluorescens in comparison to the producer. * Indicates significance. (C) Difference in the number of colony-forming units (CFUs) present on a lawn after 12 h of exposure to infected nematodes. Each of the 3 points is statistically significantly different from each other denoted by different letters. Square points with error bars represent mean ±1 s.e.

Supplementary material: PDF

Pike et al. supplementary material

Pike et al. supplementary material

Download Pike et al. supplementary material(PDF)
PDF 640.2 KB