Generation of ion electrochemical potential differences by primary active transport can involve energy inputs from light, from exergonic redox reactions and from exergonic ATP hydrolysis. These electrochemical potential differences are important for homoeostasis, for signalling, and for energizing nutrient influx. The three main ions involved are H+, Na+ (efflux) and Cl− (influx). In prokaryotes, fluxes of all three of these ions are energized by ion-pumping rhodopsins, with one archaeal rhodopsin pumping H+into the cells; among eukaryotes there is also an H+ influx rhodopsin in Acetabularia and (probably) H+ efflux in diatoms. Bacteriochlorophyll-based photoreactions export H+ from the cytosol in some anoxygenic photosynthetic bacteria, but chlorophyll-based photoreactions in marine cyanobacteria do not lead to export of H+. Exergonic redox reactions export H+ and Na+ in photosynthetic bacteria, and possibly H+ in eukaryotic algae. P-type H+- and/or Na+-ATPases occur in almost all of the photosynthetic marine organisms examined. P-type H+-efflux ATPases occur in charophycean marine algae and flowering plants whereas P-type Na+-ATPases predominate in other marine green algae and non-green algae, possibly with H+-ATPases in some cases. An F-type Cl−-ATPase is known to occur in Acetabularia. Some assignments, on the basis of genomic evidence, of P-type ATPases to H+ or Na+ as the pumped ion are inconclusive.

This study presents two years of characterization of a warm temperate rhodolith bed in order to analyse how certain environmental changes influence the community ecology. The biomass of rhodoliths and associated species were analysed during this period and in situ experiments were conducted to evaluate the primary production, calcification and respiration of the dominant species of rhodoliths and epiphytes. The highest total biomass of rhodoliths occurred during austral winter. Lithothamnion crispatum was the most abundant rhodolith species in austral summer. Epiphytic macroalgae occurred only in January 2015, with Padina gymnospora being the most abundant. Considering associated fauna, the biomass of Mollusca increased from February 2015 to February 2016. Population densities of key reef fish species inside and around the rhodolith beds showed significant variations in time. The densities of grouper (carnivores/piscivores) increased in time, especially from 2015 to 2016. On the other hand, grunts (macroinvertebrate feeders) had a modest decrease over time (from 2014 to 2016). Other parameters such as primary production and calcification of L. crispatum were higher under enhanced irradiance, yet decreased in the presence of P. gymnospora. Community structure and physiological responses can be explained by the interaction of abiotic and biotic factors, which are driven by environmental changes over time. Biomass changes can indicate that herbivores play a role in limiting the growth of epiphytes, and this is beneficial to the rhodoliths because it decreases competition for environmental resources with fleshy algae.

We report on the relationships between some conspicuous Mediterranean photophilous sponge species and Caulerpa cylindracea, a non-indigenous species. A diversification of defence strategies and behaviour is highlighted in target species belonging to different orders of Demospongiae from a western Mediterranean Marine Protected Area (NW Sardinian Sea). Caulerpa cylindracea displays a strongly invasive behaviour during body colonization of the Irciniidae Sarcotragus spinosulus and Ircinia retidermata (order Dictyoceratida). These sponges possess pre-adaptive defensive morpho-functional and physiological traits enabling them to partly withstand algal invasion. Also Aplysina aerophoba (order Verongiida) seems to be able to control colonization. Successful anti-Caulerpa strategies characterize the rarely affected Crambe crambe (order Poecilosclerida). Species-specific competitive strategies are displayed at different levels of body architecture, behaviour and physiology by native sponge species. The invasion patterns on sponges, the invasion dynamics in 2016–2017 and topographic distribution of C. cylindracea on S. spinosulus confirm this algal species as a threat, with potential long-term effects on sponge assemblages. Data suggest other kinds of poorly investigated synergic stressors affecting these habitat-forming species. Defence strategies of sponge species take the form of: (1) passive deterrence by morpho-functional pre-adaptive traits as growth form, biomass amount, surface traits, and microhabitat within the sponges' aquiferous system; (2) active physiological defence, whereby the morphology/anatomy of the sponge body is adapted to control invaders, by body remodelling and regenerative processes within the aquiferous system and at the sponge surface; (3) presumed active chemical defence by exudation processes of bioactive compounds.

We present the description of a new species of genus Timea and the re-description of T. hechteli from cryptic habitats in the Gulf of Mexico. Timea alcoladoi sp. nov. is an encrusting, pale orange sponge, with megascleres ranging from styles to subtylostyles (185–990 μm long) and a single category of microscleres, spherostrongilaster characterized by a prominent rounded centre (5–15 μm in diameter). Timea hechteli was established by Lehnert & Heimler, based on the description of a very small specimen, previously recorded as Halicometes stellata by Little, and transferred to the genus Timea by Hechtel. However, because the name ‘stellata’ was preoccupied by the type species, T. stellata, the species was renamed T. hechteli, to honour George Hechtel. After the revision of Little's material and new material, we present the re-description of T. hechteli. For both species, partial sequences of COI mtDNA and ITS1-5.8S-ITS2 rDNA region were obtained in order to complement our morphological taxonomy and establish their molecular systematic position among tethyids. Tree topologies for both loci were congruent by grouping together our species as a sister group of the main Tethyida clade, which is according to the current systematics of the group. The COI fragment showed Timea as polyphyletic due to two sequences of Timea (from GenBank) that were clustered with other sponge groups. The species described here are the first record of the genus Timea from the Mexican coast of the Gulf of Mexico. A taxonomic key for West Atlantic Timea species is also presented.

The Order Suberitida is defined as a group of marine sponges without an obvious cortex, a skeleton devoid of microscleres, and with a deletion of a small loop of 15 base pairs in the secondary structure of the 28S rDNA as a molecular synapomorphy. Suberitida comprises three families and 26 genera distributed worldwide, but mostly in temperate and polar waters. Twenty species were reported along the entire Brazilian coast, and although the north-eastern coast of Brazil seems to harbour a rich sponge fauna, our current knowledge is concentrated along the south-eastern Atlantic coast. A survey was implemented along the northern coast of Brazil, and the collection allowed the identification of six species belonging to the Order Suberitida. Two of them are considered new to science: Suberites purpura sp. nov., Hymeniacidon upaonassu sp. nov., and four, Halichondria (Halichondria) marianae Santos, Nascimento & Pinheiro, 2018, Halichondria (H.) melanadocia de Laubenfels, 1936, Suberites aurantiacus (Duchassaing & Michelotti, 1864), and Terpios fugax Duchassaing & Michelotti, 1864, are re-described. Taxonomic comparisons are made for Tropical Western Atlantic species and type species of the four genera. Finally, an identification key for the Western Atlantic Suberites species is provided.

The amphipod Ericthonius didymus Krapp-Schickel, 2013 is reported for the first time outside its type locality in European waters, from the French Atlantic coast and from the Azores, Portugal. In particular, a large population was recorded in Arcachon, France. Molecular analyses were made to confirm the validity of three closely related Ericthonius species: E. didymus, E. convexus and E. pugnax. An identification key is provided, distinguishing Ericthonius species into three groups, based on the presence or absence of stridulating ridges on coxa 2 and posterodistal lobe on basis of male pereopod 5.

Since 2012, when Ophiothela was first described in the Atlantic, there has been no consensus regarding its identification. It has been described as O. mirabilis, O. cf. mirabilis, O. danae, or only Ophiothela sp. In order to fill these gaps, our aim was to test if specimens from Brazil are Ophiothela mirabilis and/or Ophiothela danae. Syntypes from the Museum of Comparative Zoology and United States National Museum, Smithsonian Institution, were used. We examined species boundaries of the small six-rayed brittle star Ophiothela using independent character sets utilizing morphology (external morphology and morphometry) and molecular data (16S and COI). Concordance was found between the analyses indicating that Ophiothela sp. from Brazil (BR), Ophiothela mirabilis and Ophiothela danae are closely related. We suggest that O. danae should be considered as a junior synonym of O. mirabilis. A detailed description of O. mirabilis BR is presented using external morphology and microstructural ossicles (arm plates, vertebra, dental and oral plates). This description includes new diagnostic features, particularly regarding its microstructures: (i) transspondylous articulation (first record in Ophiotrichidae); (ii) eight smooth knobs on the dorsal surface of the vertebrae (to date only in Ophiothela); (iii) vertebrae with distal keel divided into two separate end processes matching the two large dorsal grooves proximally (first time in the literature); and (iv) an opening on both sides of the oral plate (as seen in other fissiparous species Ophiactis savignyi and Ophiocomella ophiactoides).

The catch of Japanese butterfish, Psenopsis anomala in Taiwan is greater than those of any other nation; however, the biology, particularly the age and growth, of this economically important fish species is little known. This study describes the age and growth of P. anomala based on 734 specimens (340 females, 363 males, 31 unsexed) caught by trawl fishery in the north-eastern waters off Taiwan from March 2007 to July 2008. The age of specimens was estimated by counting the growth annuli in sagittal otoliths. The periodicity of annulus deposition on otolith was estimated to be one year with opaque zone deposited between July and August based on marginal increment analysis. The maximum age for both sexes was estimated to be ~4. The female portion of the population was dominated by the 3+ age class, while the male portion was dominated by the 2∞ age class. The parameters of the von Bertalanffy growth function with standard error estimated based on the observed length at age using a non-linear method are as follows: L∞ = 25.47 ± 0.65 cm, k = 0.30 ± 0.03 year−1, and t0 = −1.84 ± 0.16 year for females (n = 350), and L∞ = 22.39 ± 0.45 cm, k = 0.46 ± 0.04 year−1, and t0 = −1.38 ± 0.13 year for males (n = 378). The growth performances of P. anomala reported from different geographic regions were compared, and the potential influences of sample size distribution on the estimated growth parameters were further discussed.

Black scorpion fish (Scorpaena porcus) is an important species for both artisanal and industrial fisheries in the Turkish Black Sea, with 306 tonnes landed in 2017. The diet composition of this species was investigated through the examination of their stomach contents. A total of 621 S. porcus (ranging from 12.79–765.5 g) were caught by trammel net in the south-eastern Black Sea (Turkish waters) from December 2015 to November 2016. The importance of prey items in the diet of S. porcus was assessed using the Index of Relative Importance (%IRI). Overall, the dominant species was the isopod Idotea balthica (52.8%IRI) followed by decapods (38.5%IRI) and teleosts (8.7%IRI). Seasonal variations in the diets were observed, with isopods predominant in autumn (>85%IRI), teleosts in winter (>77%IRI) and decapod crustaceans (>78%IRI) in spring and summer. The modified Costello's graphical analysis evinced a specialist feeding strategy for S. porcus during winter, spring and autumn while a shift to generalistic feeding strategy was exhibited in summer by a limited number of S. porcus individuals.

This study verifies the food assimilation of a carnivorous teleost in different timescales (weeks vs months) and evaluates how it uses the food sources. The target species is the adult ribbonfish, Trichiurus lepturus, a voracious teleost caught in commercial fisheries off south-east Brazil (21°S–22°S). The isotope models indicated Chirocentrodon bleekerianus as the main food in the ribbonfish diet in the last weeks (liver: 38.5%; 95% credible intervals: 3.4–73.9%) and last months (muscle: 36.2%; 95% credible intervals: 3.4–68.7%). The contribution of other food sources ranges from 10–16% (liver) and from 10–20% (muscle). Food assimilation remains similar at different timescales. The isotope models suggested a strong and long-lasting association of the adult females of ribbonfish with coastal waters along the study area.

Some biological aspects of marbled spinefoot (Siganus rivulatus) were determined from a southern Aegean Sea small-scale fishery. A total of 721 individuals were captured (335 females, 279 males and 87 immature) and sex ratio was found to be 1:1.27, female to male. Total lengths and ages of individuals ranged between 9.0–26.1 cm and 1–9 years. Asymptotic length (L∞), growth coefficient (K) and the theoretical age at zero length (t0) were estimated to be 27.7 cm, K = 0.162 y−1 and t0 = −1.87 y. Length at maturity value was determined as 16.6 cm for females and 16.84 cm for males. Although S. rivulatus is one of the target species for small-scale and recreational fishery in the Turkish coast of the southern Aegean Sea, especially in Gökova Bay, official landing data is lacking for Turkey. Results of the present study are of crucial importance for further fisheries management of this invasive species.

The reproductive biology and diet of the longtail butterfly ray Gymnura poecilura is described based on 630 specimens (N = 377 females and 253 males). The mean disc width (WD) of females and males was 576.7 mm (range = 190–920 mm) and 416.3 mm (230–550 mm), respectively. Sexual dimorphism in size was seen, with the maximum size of males being only 60% of the maximum female size. The disc widths at 50% maturity (WD50) were estimated to be 506.5 mm (females) and 435.9 mm (males). The mean uterine fecundity was 3.3 (range = 1–8). The size at birth was between 190 and 220 mm WD. Year-round reproduction was indicated, due to the presence of mature males and gravid females throughout the year, neonates in multiple months and large variations in embryo size within months. Feeding intensity increased with body size. Fish accounted for 80.9% of the diet (Index of Relative Importance, IRI), followed by crustaceans (18.9%) and molluscs. The species was found to be a specialized feeder.

Rough-toothed dolphins (Steno bredanensis) are regularly present in continental shelf areas of the South-western Atlantic. However, there is little information on the natural history and ecology of these delphinids. This study evaluated the occurrence, habitat use and individual movements of the species in coastal waters off Rio de Janeiro, south-eastern Brazil. Data were obtained from boat surveys between August 2011 and May 2018, during which rough-toothed dolphins were sighted in 21 distinct events, predominantly in autumn and winter. The mean group size was 29 individuals. Rough-toothed dolphins were usually recorded 130 to 2300 m from the coast, between 7.6 and 28 m depths. In total, 115 individuals were catalogued through dorsal fin marks and 61 (53%) were resighted between one (47.5%) and four (9.8%) occasions. The interval between resightings ranged from seven to 2087 days (mean = 268). Agglomerative hierarchical clustering indicated 30 individuals (49.2%) in low degree, 12 (19.7%) in medium degree and 19 (31.1%) in high degree of site fidelity. Dolphins showed a higher frequency of low degree of habitat use, despite the presence of multiyear recaptures, which may be related to the prevalence of dolphin occurrence in autumn and winter, a large home range and/or the abundance and distribution of food resources. Dedicated surveys and regional collaboration are needed to evaluate the home range and population status of this species for their effective conservation. Our findings enhanced knowledge of this little studied species facing increasing anthropogenic threats in coastal waters off Rio de Janeiro.

Over the last 25 years, the harbour porpoise (Phocoena phocoena) has made a significant return to the Southern Bight of the North Sea and the English Channel due to a shift in distribution from northerly regions. Although the ecological drivers of this return are unclear, this species faces multiple threats in the region, including by-catch and habitat degradation. Ferry-based surveys were conducted year-round between November 2011 and June 2014 to assess the influence of environmental parameters upon the spatiotemporal distribution and relative abundance of harbour porpoises in the Southern Bight of the North Sea. A total of 1450 sightings of harbour porpoises were recorded during the 100 round-trip surveys carried out between Dunkirk (France) and Dover (England). Inter-annual and monthly variations in group size were observed, with largest groups recorded in 2014 (mean = 2.02) and in January (mean = 2.32). The relative abundance showed significant seasonal variation, with peaks recorded during winter months. An inter-annual increasing relative abundance was recorded during the study period. There was a seasonally dependent association with environmental variables, particularly depth, seabed roughness and current speed. Finally, predictions suggest large increases of the relative abundance in offshore habitats during winter months and over the study period.