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A virtual seed file: the use of multispectral image analysis in the management of genebank seed accessions

Published online by Cambridge University Press:  19 August 2015

Michael Adsetts Edberg Hansen ,
Fiona R. Hay  and
Jens Michael Carstensen
Michael Adsetts Edberg Hansen
Affiliation:
Videometer A/S, DK-2970 Hørsholm, Denmark
Fiona R. Hay*
Affiliation:
International Rice Research Institute, Los Baños, Laguna, Philippines
Jens Michael Carstensen
Affiliation:
Videometer A/S, DK-2970 Hørsholm, Denmark Technical University of Denmark, DK-2800 Lyngby, Denmark
*
*Corresponding author. E-mail: [email protected]
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Abstract

We present a method for multispectral seed phenotyping as a fast and robust tool for managing genebank accessions. A multispectral vision system was used to take images of the seeds of 20 diverse varieties of rice (approximately 30 seeds for each variety). This was followed by extraction of feature information from the images. Multivariate analysis of the feature data was used to classify seed phenotypes according to accession. The proportion of correctly classified rice seeds was 93%. We conclude that the multispectral image analysis could play a role in comparing incoming seeds against existing accessions, identifying different seed types within a sample of seeds and/or in checking whether regenerated seeds match the original seeds.

Keywords

genebank managementmultispectral image analysisriceseed phenotype
Type
Short Communications
Information
Plant Genetic Resources , Volume 14 , Issue 3 , September 2016 , pp. 238 - 241
Copyright
Copyright © NIAB 2015 

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