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Genetic analysis of seed coat colour in adzuki bean (Vigna angularis L.)

Published online by Cambridge University Press:  22 March 2021

Liwei Chu ,
Pu Zhao ,
Xueqi Huang ,
Bo Zhao ,
Yisong Li ,
Kai Yang  and
Ping Wan Open the ORCID record for Ping Wan [Opens in a new window]
Liwei Chu
Affiliation:
Beijing Key Laboratory of New Technology in Agricultural Application, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of the State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, 100091, China
Pu Zhao
Affiliation:
Beijing Key Laboratory of New Technology in Agricultural Application, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China
Xueqi Huang
Affiliation:
Beijing Key Laboratory of New Technology in Agricultural Application, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China
Bo Zhao
Affiliation:
Beijing Key Laboratory of New Technology in Agricultural Application, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China
Yisong Li
Affiliation:
Key Laboratory of Urban Agriculture (North) of Ministry of Agriculture, College of Biological Science and Resources Environment, Beijing University of Agriculture, Beijing, 102206, China
Kai Yang*
Affiliation:
Beijing Key Laboratory of New Technology in Agricultural Application, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China
Ping Wan*
Affiliation:
Beijing Key Laboratory of New Technology in Agricultural Application, College of Plant Science and Technology, Beijing University of Agriculture, Beijing, 102206, China
*
*Corresponding authors. E-mail: [email protected]; [email protected]
*Corresponding authors. E-mail: [email protected]; [email protected]
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Abstract

Seed coat colour is an important quality trait, domestication trait and morphological marker, and is closely associated with flavonoid and anthocyanin metabolism pathways. The seed coat colour of adzuki bean, an important legume crop, influences the processing quality of its paste, the commodity and its nutritional quality. In this study, the genetic relationships of seed coat colour were analysed using 12 hybridized combinations of F2 individuals and four F3 families derived from hybridized combinations between the accessions of eight seed coat colours. The loci of the colour traits were analysed based on phenotypes and using the chi-square test. Ivory colour is recessive to red and is controlled by a single R locus. Black, black mottle on grey, black mottle on red, light brown, golden and brown are all dominant to red. The phenotypes of black mottle on red, light brown, golden and brown are all controlled by a single genetic locus. Black mottle on grey is controlled by two loci. Black is controlled with two loci, and the black locus shows dominant epistasis to another locus. A genetic model of these seed coat colours was predicted. Our results will be important for gene mapping and cloning of seed coat colour characters and for providing further insight into the regulatory network of seed coat colour.

Keywords

Chi-square testgenetic lociqualitative traitseed coat coloursegregationVigna angularis
Type
Research Article
Information
Plant Genetic Resources , Volume 19 , Issue 1 , February 2021 , pp. 67 - 73
Copyright
Copyright © The Author(s), 2021. Published by Cambridge University Press on behalf of NIAB

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References

Horiuchi, Y, Yamamoto, H, Ogura, R, Shimoda, N, Sato, H and Kato, K (2015) Genetic analysis and molecular mapping of genes controlling seed coat colour in adzuki bean (Vigna angularis). Euphytica, 206: 609–617.CrossRefGoogle Scholar
Isemura, T, Kaga, A, Konishi, S, Ando, T, Tomooka, N, Han, OK and Vaughan, DA (2007) Genome dissection of traits related to domestication in azuki bean (Vigna angularis) and comparison with other warm-season legumes. Annals of Botany 100: 1053–1071.CrossRefGoogle ScholarPubMed
Jiang, X, Lei, G, Deng, YY, Zhang, HL and Pu, SJ (2015) Analysis of seed colour variation and antioxidant activity of red and black adzuki bean in F3 generation. Journal of Beijing University of Agriculture 30: 1–5.Google Scholar
Jin, WL, Chen, XZ and Pu, SJ (1996) Inheritance of stem colour and seed coat colour traits in adzuki bean. Journal of Beijing University of Agriculture 11: 1–6.Google Scholar
Kaga, A, Isemura, T, Tomooka, N and Vaughan, DA (2008) The genetics of domestication of the azuki bean (Vigna angularis). Genetics 178: 1013–1036.CrossRefGoogle Scholar
Kitanookada, T, Ito, A, Koide, A, Nakamura, Y, Han K, H, Shimada, K, Sasaki, K, Ohba, K, Sibayama, S and Fukushima, M (2012) Anti-obesity role of adzuki bean extract containing polyphenols: in vivo and in vitro effects. Journal of the Science of Food and Agriculture, 92: 2644–2651.CrossRefGoogle Scholar
Kramer, C, Soltani, N, Robinson, DE, Swanton, CJ and Sikkema, PH (2012) Control of volunteer adzuki bean in soybean. Agricultural Sciences, 3: 501–509.CrossRefGoogle Scholar
Li, M, Yao, LS, Wan, P, Zhao, B, Yang, K and Li, YS (2014) Genetic analysis of seed coat color in adzuki bean. Journal of Anhui Agricultural Science, 42: 5744–5746.Google Scholar
Li, Y, Yang, K, Yang, W, Chu, L, Chen, C, Zhao, B, Li, YS, Jian, JB, Yin, ZC, Wang, TQ and Wan, P (2017). Identification of QTL and qualitative trait loci for agronomic traits using SNP markers in the adzuki bean. Frontiers in Plant Science 8: 840.CrossRefGoogle ScholarPubMed
Naruwa, T (1976) Inheritance of the morphological shape of adzuki beans. First report. Ikuiku, pp. 227–228.Google Scholar
Sato, S, Yamate, J, Hori, Y, Hatai, A, Nozawa, M and Sagai, M (2005) Protective effect of polyphenol-containing azuki bean (Vigna angularis) seed coats on the renal cortex in streptozotocin-induced diabetic rats. Journal of Nutritional Biochemistry 16:547–553.CrossRefGoogle ScholarPubMed
Yang, K, Jeong, N, Moon, JK, Lee, YH, Lee, SH, Kim, HM, et al. (2010) Genetic analysis of genes controlling natural variations in seed coat and flower colours in soybean. Journal of Heredity 101: 757–768.CrossRefGoogle Scholar
Yang, K, Tian, Z, Chen, C, Luo, L, Zhao, B, Wang, Z et al. (2015) Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proceedings of the National Academy of Sciences of the USA 112: 13213–13218.CrossRefGoogle ScholarPubMed
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