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Peltigera shennongjiana, a new cyanolichen from Central China

Published online by Cambridge University Press:  09 December 2019

Liu-Fu HAN ,
Jing-Yuan YANG ,
Shu-Qing BEI  and
Shou-Yu GUO Open the ORCID record for Shou-Yu GUO [Opens in a new window]
Liu-Fu HAN
Affiliation:
College of Life Science, Hebei Normal University, Shijiazhuang050024, P. R. China
Jing-Yuan YANG
Affiliation:
Shennongjia National Nature Reserve Administration, Shennongjia, Hubei442400, P. R. China
Shu-Qing BEI
Affiliation:
College of Life Science, Langfang Normal University, Langfang, Hebei065000, P. R. China
Shou-Yu GUO*
Affiliation:
State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing100101, P. R. China
*
S.-Y. Guo (corresponding author): Email: [email protected]
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Abstract

As part of our ongoing research on Peltigera, we recognize a morphologically and phylogenetically distinct new species, Peltigera shennongjiana L. F. Han & S. Y. Guo, from the Shennongjia region of Central China. It is distinguished from other members of the P. canina-group by the presence of abundant phyllidia and flat, branched lobules along the margin or laminal cracks, short lobes, and a pruinose, usually greyish upper surface. The various populations sampled share identical ITS nr DNA sequences, of which the ITS2 regions are characterized by a unique secondary structure. Furthermore, we provide a detailed comparison of the characteristics of P. shennongjiana with morphologically similar species and a key to Peltigera species reported from China.

Keywords

ITSlichen flora of ChinaPeltigeralessecondary structureShennongjia Mountain
Type
Articles
Information
The Lichenologist , Volume 51 , Issue 6 , November 2019 , pp. 561 - 574
Copyright
Copyright © British Lichen Society 2019

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Footnotes

L.-F. Han, J.-Y. Yang and S.-Q. Bei contributed equally to this work.

References

Anstett, D. N., O'Brien, H., Larsen, E. W., McMullin, R. T. & Fortin, M. J. (2013) Dispersal analysis of three Peltigera species based on landscape genetics data. Mycology 4: 187–195.CrossRefGoogle ScholarPubMed
Byun, Y. & Han, K. (2009) PseudoViewer3: generating planar drawings of large-scale RNA structures with pseudoknots. Bioinformatics 25: 1435–1437.CrossRefGoogle ScholarPubMed
Cao, S. N., Liu, M., Zhou, Q. M. & Guo, S. Y. (2011) Group I introns in lichen forming fungi and their application for phylogenetic analysis. Mycosystema 30: 920–931.Google Scholar
Chen, X. L. (1986) Peltigera in North East China. Acta Mycologica Sinica 5: 18–29.Google Scholar
Coleman, A. W. (2007) Pan-eukaryote ITS2 homologies revealed by RNA secondary structure. Nucleic Acids Research 35: 3322–3329.CrossRefGoogle ScholarPubMed
Gardes, M. & Bruns, T. D. (1993) ITS primers with enhanced specificity for basidiomycetes – application to the identification of mycorrhizae and rusts. Molecular Ecology 2: 113–118.CrossRefGoogle ScholarPubMed
Goffinet, B. & Miadlikowska, J. (1999) Peltigera phyllidiosa (Peltigeraceae, Ascomycotina), a new species from the Southern Appalachians corroborated by ITS sequences. Lichenologist 31: 247–256.Google Scholar
Goffinet, B., Miadlikowska, J. & Goward, T. (2003) Phylogenetic inferences based on nrDNA sequences support five morphospecies within the Peltigera didactyla complex (lichenized Ascomycota). Bryologist 106: 349–364.CrossRefGoogle Scholar
Goward, T. & Goffinet, B. (2000) Peltigera chionophila, a new lichen (Ascomycetes) from the Western Cordillera of North America. Bryologist 103: 493–498.CrossRefGoogle Scholar
Goward, T., Goffinet, B. & Vitikainen, O. (1995) Synopsis of the genus Peltigera (Lichenes, Ascomycotina) in British Columbia with a key to the North American species. Canadian Journal of Botany 73: 91–111.CrossRefGoogle Scholar
Guo, S. Y. (2013) Distinguishing species in the lichen genera Cetrelia and Platismatia (Ascomycota) by the new genetic distances inferred from nrDNA ITS sequences. Chenia 11: 183–195.Google Scholar
Han, L. F., Zhang, Y. Y. & Guo, S. Y. (2013) Peltigera wulingensis, a new lichen (Ascomycota) from north China. Lichenologist 45: 329–336.CrossRefGoogle Scholar
Han, L. F., Zheng, T. X. & Guo, S. Y. (2015) A new species in the lichen genus Peltigera from northern China based on morphology and DNA sequence data. Bryologist 118: 46–53.CrossRefGoogle Scholar
Hershkovitz, M. A. & Lewis, L. A. (1996) Deep-level diagnostic value of the rDNA-ITS region. Molecular Biology and Evolution 13: 1276–1295.CrossRefGoogle ScholarPubMed
Huelsenbeck, J. P. & Ronquist, F. (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754–755.CrossRefGoogle ScholarPubMed
Kirk, P. M., Cannon, P. F., Minter, D. W. & Stalpers, J. A. (2008) Dictionary of the Fungi. 10th Edition. Wallingford: CAB International.Google Scholar
Koetschan, C., Förster, F., Keller, A., Schleicher, T., Ruderisch, B., Schwarz, R., Müller, T., Wolf, M. & Schultz, J. (2010) The ITS2 Database III – sequences and structures for phylogeny. Nucleic Acids Research 38: D275–279.CrossRefGoogle ScholarPubMed
Linnaeus, C. (1753) Species Plantarum. Stockholm: Salvius.Google Scholar
Liu, C. Y. & Guo, S. Y. (2009) Comparative analysis of secondary structure of 5.8S-ITS2 rRNA in the genus Usnea. Mycosystema 28: 705–711.Google Scholar
Lutzoni, F., Wagner, P., Reeb, V. & Zoller, S. (2000) Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology. Systematic Biology 49: 628–651.CrossRefGoogle ScholarPubMed
Magain, N., Miadlikowska, J., Mueller, O., Gajdeczka, M., Truong, C., Salamov, A., Grigoriev, I., Dubchak, I., Goffinet, B., Sérusiaux, E., et al. (2017) Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: a case study using the lichen-forming genus Peltigera section Polydactylon. Molecular Phylogenetics and Evolution 117: 10–29.CrossRefGoogle ScholarPubMed
Manoharan-Basil, S. S., Miadlikowska, J., Goward, T., Andrésson, Ó. S. & Miao, V. P. W. (2016) Peltigera islandica, a new cyanolichen species in section Peltigera (‘P. canina group’). Lichenologist 48: 451–467.CrossRefGoogle Scholar
Martínez, I., Buggazo, A. R., Vitikainen, O. & Escudero, A. (2003) Distribution patterns in the genus Peltigera Willd. Lichenologist 35: 301–323.CrossRefGoogle Scholar
Miadlikowska, J. & Lutzoni, F. (2000) Phylogenetic revision of the genus Peltigera (lichen-forming Ascomycota) based on morphological, chemical, and large subunit nuclear ribosomal DNA data. International Journal of Plant Sciences 161: 925–958.CrossRefGoogle Scholar
Miadlikowska, J., Lutzoni, F., Goward, T., Zoller, S. & Posada, D. (2003) New approach to an old problem: incorporating signal from gap-rich regions of ITS and rDNA large subunit into phylogenetic analyses to resolve the Peltigera canina species complex. Mycologia 95: 1181–1203.CrossRefGoogle Scholar
Müller, T., Philippi, N., Dandekar, T., Schultz, J. & Wolf, M. (2007) Distinguishing species. RNA 13: 1469–1472.CrossRefGoogle ScholarPubMed
Niu, D., Zhu, Q., Wang, Z., Shi, J., Bai, M. & Zheng, X. (2016) New record of the lichen genus Peltigera from China. Acta Botanica Boreali - Occidentalia Sinica 36: 1245–1249.Google Scholar
Nylander, J. A. A. (2004) MrModeltest v2. Evolutionary Biology Centre, Uppsala University. Program distributed by the author.Google Scholar
O'Brien, H. E., Miadlikowska, J. & Lutzoni, F. (2009) Assessing reproductive isolation in highly diverse communities of the lichen-forming fungal genus Peltigera. Evolution 63: 2076–2086.CrossRefGoogle ScholarPubMed
Orange, A., James, P. W. & White, F. J. (2010) Microchemical Methods for the Identification of Lichens. 2nd Edition. London: British Lichen Society.Google Scholar
Piercey-Normore, M. D., Coxson, D., Goward, T. & Goffinet, B. (2006) Phylogenetic position of a Pacific Northwest North American endemic cyanolichen, Nephroma occultum (Ascomycota, Peltigerales). Lichenologist 38: 441–456.CrossRefGoogle Scholar
Schultz, J., Maisel, S., Gerlach, D., Müller, T., & Wolf, M. (2005) A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota. RNA 11: 361–364.CrossRefGoogle ScholarPubMed
Sérusiaux, E., Goffinet, B., Miadlikowska, J. & Vitikainen, O. (2009) Taxonomy, phylogeny and biogeography of the lichen genus Peltigera in Papua New Guinea. Fungal Diversity 38: 185–224.Google Scholar
Stenroos, S., Vitikainen, O. & Koponen, T. (1994) Cladoniaceae, Peltigeraceae and other lichens from northwestern Sichuan, China. Journal of the Hattori Botanical Laboratory 75: 319–344.Google Scholar
Swofford, D. L. (2002) PAUP*: Phylogenetic Analysis Using Parsimony (and Other Methods). Version 4. Sunderland, Masachusetts.: Sinauer Associates.Google Scholar
Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013) MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Molecular Biology and Evolution 30: 2725–2729.CrossRefGoogle Scholar
Vitikainen, O. (1986) Peltigera dolichospora, a new Himalayan-western Chinese lichen. Lichenologist 18: 387–390.CrossRefGoogle Scholar
Vitikainen, O. (1994) Taxonomic revision of Peltigera (lichenized Ascomycotina) in Europe. Acta Botanica Fennica 152: 1–96.Google Scholar
Vitikainen, O. (2004) Peltigera. In Lichen Flora of the Greater Sonoran Desert Region, Vol. 2 (Nash III, T. H., Ryan, B. D., Diederich, P., Gries, C. & Bungartz, F., eds): 389–398. Tempe, Arizona: Lichens Unlimited, Arizona State University.Google Scholar
Wei, J. C. (1991) An Enumeration of Lichens in China. Beijing: International Academic Publishers.Google Scholar
White, T. J., Bruns, T. D., Lee, S. B. & Taylor, J. W. (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: A Guide to Methods and Applications (Innis, M. A., Sninsky, D. H. & White, T. J., eds): 315–322. San Diego: Academic Press.Google Scholar
Willdenow, C. L. (1787) Florae Berolinensis Prodromus. Berlin: Wilhelm Vieweg.Google Scholar
Wu, J. N. & Liu, H. J. (2012) Flora Lichenum Sinicorum (Vol. 11). Beijing: Science Press.Google Scholar
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