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Diffusion of swimming model micro-organisms in a semi-dilute suspension

Published online by Cambridge University Press:  24 September 2007

TAKUJI ISHIKAWA  and
T. J. PEDLEY
TAKUJI ISHIKAWA
Affiliation:
Department of Bioengineering and Robotics, Tohoku University, 6-6-01, Aoba, Aramaki, Aoba-ku, Sendai 980-8579, Japan
T. J. PEDLEY
Affiliation:
Department of Applied Mathematics and Theoretical Physics, University of Cambridge, Centre for Mathematical Sciences, Wilberforce Road, Cambridge CB3 0WA, UK
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Abstract

The diffusive behaviour of swimming micro-organisms should be clarified in order to obtain a better continuum model for cell suspensions. In this paper, a swimming micro-organism is modelled as a squirming sphere with prescribed tangential surface velocity, in which the centre of mass of the sphere may be displaced from the geometric centre (bottom-heaviness). Effects of inertia and Brownian motion are neglected, because real micro-organisms swim at very low Reynolds numbers but are too large for Brownian effects to be important. The three-dimensional movement of 64 or 27 identical squirmers in a fluid otherwise at rest, contained in a cube with periodic boundary conditions, is dynamically computed, for random initial positions and orientations. The computation utilizes a database of pairwise interactions that has been constructed by the boundary element method. In the case of (non-bottom-heavy) squirmers, both the translational and the orientational spreading of squirmers is correctly described as a diffusive process over a sufficiently long time scale, even though all the movements of the squirmers were deterministically calculated. Scaling of the results on the assumption that the squirmer trajectories are unbiased random walks is shown to capture some but not all of the main features of the results. In the case of (bottom-heavy) squirmers, the diffusive behaviour in squirmers' orientations can be described by a biased random walk model, but only when the effect of hydrodynamic interaction dominates that of the bottom-heaviness. The spreading of bottom-heavy squirmers in the horizontal directions show diffusive behaviour, and that in the vertical direction also does when the average upward velocity is subtracted. The rotational diffusivity in this case, at a volume fraction c=0.1, is shown to be at least as large as that previously measured in very dilute populations of swimming algal cells (Chlamydomonas nivalis).

Type
Papers
Information
Journal of Fluid Mechanics , Volume 588 , 10 October 2007 , pp. 437 - 462
Copyright
Copyright © Cambridge University Press 2007

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