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Conservation of cattle genetic resources: the role of breeds

Published online by Cambridge University Press:  13 March 2014

M. FELIUS
Affiliation:
Mauritsstraat 167, Rotterdam 3012 CH, Rotterdam, The Netherlands
B. THEUNISSEN
Affiliation:
Descartes Centre for the History and Philosophy of the Sciences, Utrecht University, P.O. Box 80.010, 3508 TA Utrecht, The Netherlands
J. A. LENSTRA*
Affiliation:
IRAS, Faculty of Veterinary Medicine, Utrecht University, Yalelaan 104, 3584 CM Utrecht, The Netherlands
*
*To whom all correspondence should be addressed. Email: [email protected]

Summary

Focusing on cattle (Bos taurus, Bos indicus), the present paper discusses the concept of the breed in the context of the dynamic history of livestock domestication. A breed categorization is proposed on the basis of how the breeds came into existence. The online Appendix (available at http://journals.cambridge.org/AGS) presents a survey of the cattle breeds of the world consisting of: (1) a list of breeds per country and then subdivided according to the proposed categories; (2) a list of breed names, including synonyms and translations, ordered according to a comprehensive breed classification; and (3) an alphabetical list of these names. The commonly accepted perceptions of breeds and how these are influenced by the nomenclature are described. Considering the history of breeds, it is argued that conservation of genetic diversity does not necessarily imply conservation of breeds. However, breeds are instrumental for the conservation of genetic diversity as independent genetic management units. These considerations may very well be extrapolated to other domestic species.

Type
Animal Review
Copyright
Copyright © Cambridge University Press 2014 

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References

REFERENCES

Ajmone-Marsan, P., Garcia, J. F. & Lenstra, J. A. (2010). On the origin of cattle: how aurochs became cattle and colonized the world. Evolutionary Anthropology 19, 148157.Google Scholar
Amaral, A. J., Ferretti, L., Megens, H. J., Crooijmans, R. P. M. A., Nie, H., Ramos-Onsins, S. E., Perez-Enciso, M., Schook, L. B. & Groenen, M. A. M. (2011). Genome-wide footprints of pig domestication and selection revealed through massive parallel sequencing of pooled DNA. PLoS ONE 6, e14782. DOI: 10.1371/journal.pone.0014782 Google Scholar
Amigues, Y., Boitard, S., Bertrand, C., Sancristobal, M. & Rocha, D. (2011). Genetic characterization of the Blonde d'Aquitaine cattle breed using microsatellite markers and relationship with three other French cattle populations. Journal of Animal Breeding and Genetics 128, 201208.CrossRefGoogle ScholarPubMed
Armitage, P. L. (1982). Developments in British cattle husbandry from the Romano-British period to early modern times. Ark 9, 5054.Google Scholar
Bangham, A. D. & Blumberg, B. S. (1958). Distribution of electrophoretically different haemoglobins among some cattle breeds of Europe and Africa. Nature 181, 15511552.Google Scholar
Benecke, N. (1994). Der Mensch Und Seine Haustiere: die Geschichte einer Jahrtausendealten Beziehung. Stuttgart, Germany: Theiss.Google Scholar
Béranger, C. & Vissac, B. (1994). An holistic approach to livestock farming systems: theoretical and methodolgical aspects. In The Study of Livestock Farming Systems in a Research and Development Framework. EAAP Publication 63 (Eds Gibon, A. & Flamant, J. C.), pp. 517. Wageningen, The Netherlands: Wageningen University Press.Google Scholar
Boettcher, P. J., Tixier-Boichard, M., Toro, M. A., Simianer, H., Eding, H., Gandini, G., Joost, S., Garcia, D., Colli, L., Ajmone-Marsan, P. & GLOBALDIV Consortium (2010). Objectives, criteria and methods for using molecular genetic data in priority setting for conservation of animal genetic resources. Animal Genetics 41 (Suppl. 1), 6477.CrossRefGoogle ScholarPubMed
Bonin, A., Nicole, F., Pompanon, F., Miaud, C. & Taberlet, P. (2007). Population adaptive index: a new method to help measure intraspecific genetic diversity and prioritize populations for conservation. Conservation Biology 21, 697708.Google Scholar
Buchanan, D. S. & Dolezal, S. L. (1999). Breeds of cattle. In The Genetics of Cattle (Eds Fries, R. & Ruvinsky, A.), pp. 665695. Wallingford, UK: CABI Publishing.Google Scholar
Buchanan, D. S. & Lenstra, J. A. (in press). Breeds of cattle. In The Genetics of Cattle, 2nd edn (Eds Garrick, D. J. & Ruvinsky, A.). Wallingford, UK: CABI.Google Scholar
Canon, J., Garcia, D., Garcia-Atance, M. A., Obexer-Ruff, G., Lenstra, J. A., Ajmone-Marsan, P., Dunner, S. & ECONOGENE Consortium (2006). Geographical partitioning of goat diversity in Europe and the Middle East. Animal Genetics 37, 327334.Google Scholar
Canon, J., Tupac-Yupanqui, I., Garcia-Atance, M. A., Cortes, O., Garcia, D., Fernandez, J. & Dunner, S. (2008). Genetic variation within the Lidia bovine breed. Animal Genetics 39, 439445.CrossRefGoogle ScholarPubMed
Carlborg, O., Jacobsson, L., Ahgren, P., Siegel, P. & Andersson, L. (2006). Epistasis and the release of genetic variation during long-term selection. Nature Genetics 38, 418420.Google Scholar
Cheese, A. (1979). White Park Cattle. Ark 6, 5556.Google Scholar
Chikhi, L., Goossens, B., Treanor, A. & Bruford, M. W. (2004). Population genetic structure of and inbreeding in an insular cattle breed, the Jersey, and its implications for genetic resource management. Heredity 92, 396401.Google Scholar
Clop, A., Amills, M., Noguera, J. L., Fernandez, A., Capote, J., Ramon, M. M., Kelly, L., Kijas, J. M., Andersson, L. & Sanchez, A. (2004). Estimating the frequency of Asian cytochrome B haplotypes in standard European and local Spanish pig breeds. Genetics, Selection, Evolution 36, 97104.CrossRefGoogle ScholarPubMed
Decker, J. E., Pires, J. C., Conant, G. C., McKay, S. D., Heaton, M. P., Chen, K., Cooper, A., Vilkki, J., Seabury, C. M., Caetano, A. R., Johnson, G. S., Brenneman, R. A., Hanotte, O., Eggert, L. S., Wiener, P., Kim, J. J., Kim, K. S., Sonstegard, T. S., Van Tassell, C. P., Neibergs, H. L., McEwan, J. C., Brauning, R., Coutinho, L. L., Babar, M. E., Wilson, G. A., McClure, M. C., Rolf, M. M., Kim, J., Schnabel, R. D. & Taylor, J. F. (2009). Resolving the evolution of extant and extinct ruminants with high-throughput phylogenomics. Proceedings of the National Academy of Sciences USA 106, 1864418649.Google Scholar
Dervillé, M., Patin, S. & Avon, L. (2009). Races Bovines de France. Origine, Standard et Sélection. Paris, France: Édition France Agricole.Google Scholar
Edwards, C. J., Ginja, C., Kantanen, J., Pérez-Pardal, L., Tresset, A., Stock, F., Gama, L. T., Penedo, M. C. T., Bradley, D. G., Lenstra, J. A., Nijman, I. J. & European Cattle Genetic Diversity Consortium (2011). Dual origins of dairy cattle farming – evidence from a comprehensive survey of European Y-chromosomal variation. PLoS ONE 6, e15922. DOI: 10.1371/journal.pone.0015922 Google Scholar
Eitan, Y. & Soller, M. (2004). Selection-induced genetic variation. In Evolutionary Theory and Processes: Modern Horizons, Papers in Honour of Eviatar Nevo (Ed. Wasser, S. P.), pp. 153176. Dordrecht, Netherlands: Kluwer Academic Publishers.CrossRefGoogle Scholar
Epstein, H. & Mason, I. L. (1984). Cattle. In Evolution of Domesticated Animals (Ed. Mason, I. L.), pp. 627. Essex, UK: Longman Group.Google Scholar
European Cattle Genetic Diversity Consortium (2006). Marker-assisted conservation of European cattle breeds: an evaluation. Animal Genetics 37, 475481.Google Scholar
FAO (2007). The State of the World's Animal Genetic Resources for Food and Agriculture. Rome: FAO.Google Scholar
FAO (2011). Molecular Genetic Characterization of Animal Genetic Resources. FAO Animal Production and Health Guidlines No. 9. Rome: FAO.Google Scholar
Felius, M. (1995). Cattle Breeds, an Encyclopedia. Doetinchem, The Netherlands: Misset Uitgeverij.Google Scholar
Felius, M., Koolmees, P. A., Theunissen, B., European Cattle Genetic Diversity Consortium & Lenstra, J. A. (2011). On the breeds of cattle – historic and current classifications. Diversity 3, 660692.CrossRefGoogle Scholar
Fussell, G. E. (1972). The Classical Tradition in West European Farming. Newton Abbot, Devon, UK: David & Charles.Google Scholar
Giovambattista, G., Ripoli, M. V., Peral-Garcia, P. & Bouzat, J. L. (2001). Indigenous domestic breeds as reservoirs of genetic diversity: the Argentinean Creole cattle. Animal Genetics 32, 240247.CrossRefGoogle ScholarPubMed
Granberg, L., Kantanen, J. & Soini, K. (2009). Sakha Ynaga. Cattle of the Yakuts. Helsinki: Finnish Academy of Science and Letters Annales Academiae Scientiarum Fennicae.Google Scholar
Groeneveld, L. F., Lenstra, J. A., Eding, H., Toro, M. A., Scherf, B., Pilling, D., Negrini, R., Finlay, E. K., Jianlin, H., Groeneveld, E., Weigend, S. & The GLOBALDIV Consortium (2010). Genetic diversity in farm animals: a review. Animal Genetics 41 (Suppl. 1), 631.Google Scholar
Hall, S. J. G. (1994). Livestock Biodiversity: Genetic Resources for the Farming of the Future. Oxford, UK: Blackwell Science Ltd.Google Scholar
Hall, S. J. G. (2004). Livestock Biodiversity. Genetic Resources for the Farming of the Future. Oxford, UK: Blackwell Publishing.Google Scholar
Hall, S. J., Lenstra, J. A., Deeming, D. C. & European Cattle Genetic Diversity Consortium (2012). Prioritization based on neutral genetic diversity may fail to conserve important characteristics in cattle breeds. Journal of Animal Breeding and Genetics (Zeitschrift fur Tierzuchtung und Zuchtungsbiologie) 129, 218225.CrossRefGoogle ScholarPubMed
Haring, F., Hammond, J. & Johansson, I. (1961). Handbuch Der Tierzüchtung. Hamburg-Berlin: Paul Parey.Google Scholar
Hiemstra, S. J., De Haas, Y., Mäki-Tanila, A. & Gandini, G. (2010). Local Cattle Breeds in Europe. Wageningen, The Netherlands: Wageningen Academic Publishers.Google Scholar
Joshi, N. R., McLaughlin, E. A. M. & Phillips, R. W. (1957). Types and Breeds of African Cattle. FAO Agricultural Studies No. 37. Rome: FAO.Google Scholar
Kijas, J. W., Lenstra, J. A., Hayes, B., Boitard, S., Porto Neto, L. R., San Cristobal, M., Servin, B., McCulloch, R., Whan, V., Gietzen, K., Paiva, S., Barendse, W., Ciani, E., Raadsma, H., McEwan, J., Dalrymple, B. & International Sheep Genomics Consortium Members (2012). Genome-wide analysis of the world's sheep breeds reveals high levels of historic mixture and strong recent selection. PLoS Biology 10, e1001258. DOI: 10.1371/journal.pbio.1001258 Google Scholar
Larson, G., Liu, R., Zhao, X., Yuan, J., Fuller, D., Barton, L., Dobney, K., Fan, Q., Gu, Z., Liu, X. H., Luo, Y., Lv, P., Andersson, L. & Li, N. (2010). Patterns of East Asian pig domestication, migration, and turnover revealed by modern and ancient DNA. Proceedings of the National Academy of Sciences USA 107, 76867691.Google Scholar
Ludwig, A., Alderson, L., Fandrey, E., Lieckfeldt, D., Soederlund, T. K. & Froelich, K. (2013). Tracing the genetic roots of the indigenous White Park Cattle. Animal Genetics 44, 383386.CrossRefGoogle ScholarPubMed
Markham, G. (1614). Cheap and Good Husbandry. London: Publisher unknown.Google Scholar
Martin-Burriel, I., Rodellar, C., Lenstra, J. A., Sanz, A., Cons, C., Osta, R., Reta, M., De Arguello, S., Sanz, A. & Zaragoza, P. (2007). Genetic diversity and relationships of endangered Spanish cattle breeds. Journal of Heredity 98, 687691.Google Scholar
Martinez, A. M., Gama, L. T., Canon, J., Ginja, C., Delgado, J. V., Dunner, S., Landi, V., Martin-Burriel, I., Penedo, M. C., Rodellar, C., Vega-Pla, J. L., Acosta, A., Alvarez, L. A., Camacho, E., Cortes, O., Marques, J. R., Martinez, R., Martinez, R. D., Melucci, L., Martinez-Velazquez, G., Munoz, J. E., Postiglioni, A., Quiroz, J., Sponenberg, P., Uffo, O., Villalobos, A., Zambrano, D. & Zaragoza, P. (2012). Genetic footprints of Iberian cattle in America 500 years after the arrival of Columbus. PLoS ONE 7, e49066. DOI: 10.1371/journal.pone.0049066 CrossRefGoogle ScholarPubMed
McKay, S. D., Schnabel, R. D., Murdoch, B. M., Matukumalli, L. K., Aerts, J., Coppieters, W., Crews, D., Dias Neto, E., Gill, C. A., Gao, C., Mannen, H., Wang, Z., Van Tassell, C. P., Williams, J. L., Taylor, J. F. & Moore, S. S. (2008). An assessment of population structure in eight breeds of cattle using a whole genome SNP panel. BMC Genetics 9, 37. DOI: 10.1186/1471-2156-9-37 CrossRefGoogle ScholarPubMed
Nomura, K., Ishii, K., Dadi, H., Takahashi, Y., Minezawa, M., Cho, C. Y., Sutopo, Faruque, M. O., Nyamsamba, D. & Amano, T. (2012). Microsatellite DNA markers indicate three genetic lineages in East Asian indigenous goat populations. Animal Genetics 43, 760767.Google Scholar
Nomura, K., Yonezawa, T., Mano, S., Kawakami, S., Shedlock, A. M., Hasegawa, M. & Amano, T. (2013). Domestication process of the goat revealed by an analysis of the nearly complete mitochondrial protein-encoding genes. PloS ONE 8, e67775. DOI: 10.1371/journal.pone.0067775 Google Scholar
Oldenbroek, K. (2007). Utilisation and Conservation of Farm Animal Genetic Resources. Wageningen, The Netherlands: Wageningen Academic Publishers.Google Scholar
Petersen, J. L., Mickelson, J. R., Cothran, E. G., Andersson, L. S., Axelsson, J., Bailey, E., Bannasch, D., Binns, M. M., Borges, A. S., Brama, P., da Camara Machado, A., Distl, O., Felicetti, M., Fox-Clipsham, L., Graves, K. T., Guerin, G., Haase, B., Hasegawa, T., Hemmann, K., Hill, E. W., Leeb, T., Lindgren, G., Lohi, H., Lopes, M. S., McGivney, B. A., Mikko, S., Orr, N., Penedo, M. C., Piercy, R. J., Raekallio, M., Rieder, S., Roed, K. H., Silvestrelli, M., Swinburne, J., Tozaki, T., Vaudin, M., Wade, C. & McCue, M. E. (2013). Genetic diversity in the modern horse illustrated from genome-wide SNP data. PloS ONE 8, e54997. DOI: 10.1371/journal.pone.0054997 CrossRefGoogle ScholarPubMed
Rath, S. (1998). The Complete Cow. Stillwater, USA: Voyageur Press.Google Scholar
Rodriguez, M. F. (2010). Cuiá De Campo De Las Razas Autóctonas Españolas. Madrid: Ministerio de Medio Ambiente y Medio Rural y Marino, Centro de Publicaciones.Google Scholar
Rouse, J. E. (1977). The Criollo: Spanish Cattle in the Americas. Norman, OK, USA: University of Oklahoma Press.Google Scholar
Russell, N. (1986). Like Engend'ring Like: Heredity and Animal Breeding in Early Modern England. Cambridge, UK: Cambridge University Press.Google Scholar
Sanchez Belda, A. (1984). Razas Bovinas Españoles. Madrid: Minosterio de Agricultura Pesca y Alimentación.Google Scholar
Skehel, M. (1995). A Taste of Lincoln Red. Lincoln, UK: Lincoln Red Cattle Society.Google Scholar
Sponenberg, B. P. (2011). Livestock guard dogs: what is a breed and why does it matter? ALBC News July/August. Available from: http://albc-usa.org/Newsletter/newsletterJulyAugust2011.html (accessed 28 January 2014).Google Scholar
Taberlet, P., Valentini, A., Rezaei, H. R., Naderi, S., Pompanon, F., Negrini, R. & Ajmone-Marsan, P. (2008). Are cattle, sheep, and goats endangered species? Molecular Ecology 17, 275284.Google Scholar
Theunissen, B. (2008). Breeding without Mendelism: theory and practice of dairy cattle breeding in the Netherlands 1900–1950. Journal of the History of Biology 41, 637676.Google Scholar
Theunissen, B. (2012). Breeding for nobility or for production? Cultures of dairy cattle breeding in the Netherlands, 1945–1995. Isis 103, 278309.Google Scholar
Trow-Smith, R. (1959). A History of British Livestock Husbandry, 1700–1900. London: Routledge and Kegan Paul.Google Scholar
Troy, C. S., MacHugh, D. E., Bailey, J. F., Magee, D. A., Loftus, R. T., Cunningham, P., Chamberlain, A. T., Sykes, B. C. & Bradley, D. G. (2001). Genetic evidence for Near-Eastern origins of European cattle. Nature 410, 10881091.Google Scholar
Tubbs, L. G. (1947). The Book of the Jersey. Herts, UK: Published by the Author.Google Scholar
Van de Goor, L. H., van Haeringen, W. A. & Lenstra, J. A. (2011). Population studies of 17 equine STR for forensic and phylogenetic analysis. Animal Genetics 42, 627633.Google Scholar
Visscher, P. M., Smith, D., Hall, S. J. & Williams, J. L. (2001). A viable herd of genetically uniform cattle. Nature 409, 303.CrossRefGoogle ScholarPubMed
Wilson, J. (1909). The Evolution of British Cattle and the Fashioning of Breeds. London: Vinton & Company.Google Scholar
Wiseman, J. (1986). The Pig. A British History. London: Duckworth.Google Scholar
Wood, R. J. & Orel, V. (2001). Genetic Prehistory in Selective Breeding: A Prelude to Mendel. Oxford, UK: Oxford University Press.Google Scholar
Woolliams, J. A. & Toro, M. A. (2007). What is genetic diversity? In Utilisation and Conservation of Farm Animal Genetic Resources (Ed. Oldenbroek, K.), pp. 5574. Wageningen, The Netherlands: Wageningen Academic Publishers.Google Scholar
Wright, S. (1969). Evolution and Genetics of Populations, Vol. 2. the Theory of Gene Frequencies. Chicago, UK: University of Chicago Press.Google Scholar
Yindee, M., Vlamings, B. H., Wajjwalku, W., Techakumphu, M., Lohachit, C., Sirivaidyapong, S., Thitaram, C., Amarasinghe, A. A., Alexander, P. A., Colenbrander, B. & Lenstra, J. A. (2010). Y-chromosomal variation confirms independent domestications of swamp and river buffalo. Animal Genetics 41, 433435.Google Scholar
Zeder, M. A., Emshwiller, E., Smith, B. D. & Bradley, D. G. (2006). Documenting domestication: the intersection of genetics and archaeology. Trends in Genetics 22, 139155.Google Scholar
Zeuner, F. E. (1963). A History of Domesticated Animals. New York: Harper & Row.Google Scholar
Zhang, Y., Vankan, D., Zhang, Y. & Barker, J. S. (2011). Genetic differentiation of water buffalo (Bubalus bubalis) populations in China, Nepal and south-east Asia: inferences on the region of domestication of the swamp buffalo. Animal Genetics 42, 366377.Google Scholar
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