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Quantifying parent-of-origin variation in growth and reproductive traits of Kermani sheep

Published online by Cambridge University Press:  18 July 2022

Morteza Mokhtari*
Affiliation:
Department of Animal Science, Faculty of Agriculture, University of Jiroft, P.O. Box 364, Jiroft, Iran
Arsalan Barazandeh
Affiliation:
Department of Animal Science, Faculty of Agriculture, University of Jiroft, P.O. Box 364, Jiroft, Iran
Zahra Roudbari
Affiliation:
Department of Animal Science, Faculty of Agriculture, University of Jiroft, P.O. Box 364, Jiroft, Iran
Farhad Ghafouri-Kesbi
Affiliation:
Department of Animal Science, Faculty of Agriculture, Bu-Ali Sina University, Hamedan, Iran
Mahmoud Amiri Roudbar
Affiliation:
Department of Animal Science, Safiabad-Dezful Agricultural and Natural Resources Research and Education Center, Agricultural Research, Education & Extension Organization (AREEO), Dezful, 333, Iran
*
Author for correspondence: Morteza Mokhtari, E-mail: [email protected]

Abstract

Records on growth and reproductive characteristics collected from 1993 to 2013 at the Breeding Station of Kermani sheep, south-east of Iran, were used for estimating genetic parameters related to parent-of-origin effects. The studied growth traits were birth weight (BWT), weaning weight (WWT), six-month weight (6MW), average daily gain from birth to weaning (ADG1), and average daily gain from weaning to six months of age (ADG2). The reproductive traits were litter size at birth per ewe lambing (LSB), litter size at weaning per ewe lambing (LSW), the sum of litter weight at birth per ewe lambing (LWB), and the sum of litter weight at weaning per ewe lambing (LWW). Models with and without imprinting (maternal and paternal) effects were compared by applying Akaike's information criterion (AIC). Maternal imprinting effects explained 14, 7, 24 and 5% of the phenotypic variances for BWT, WWT, 6MW and ADG1, respectively and their inclusion in the model decreased direct heritability estimates for BWT (from 0.07 to 0.05), WWT (from 0.29 to 0.23), 6MW (from 0.26 to 0.12) and ADG1 (from 0.20 to 0.17). Imprinting effects did not affect ADG2 and studied reproductive traits. The results indicated that a considerable proportion of the maternal imprinting effects overlap with direct additive genetic and maternal effects. Therefore, imprinting effects may be crucial for the genetic assessment of BWT, WWT, 6MW and ADG1 in Kermani sheep.

Type
Animal Research Paper
Copyright
Copyright © The Author(s), 2022. Published by Cambridge University Press

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References

Akaike, H (1974) A new look at the statistical model identification. IEEE Transactions on Automatic Control 19, 716723.CrossRefGoogle Scholar
Amiri Roudbar, M, Mohammadabadi, M, Mehrgardi, AA and Abdollahi-Arpanahi, R (2017) Estimates of variance components due to parent-of-origin effects for body weight in Iran-Black sheep. Small Ruminant Research 149, 15.10.1016/j.smallrumres.2017.01.002CrossRefGoogle Scholar
Amiri Roudbar, M, Abdollahi-Arpanahi, R, Ayatollahi Mehrgardi, A, Mohammadabadi, M, Taheri Yeganeh, A and Rosa, GJM (2018) Estimation of the variance due to parent-of-origin effects for productive and reproductive traits in Lori-Bakhtiari sheep. Small Ruminant Research 160, 95102.10.1016/j.smallrumres.2018.01.022CrossRefGoogle Scholar
Barlow, DP and Bartolomei, MS (2014) Genomic imprinting in mammals. Cold Spring Harbor Perspective in Biology 6, a018382.CrossRefGoogle ScholarPubMed
de Vries, AG, Kerr, R, Tier, B, Long, T and Meuwissen, THE (1994) Gametic imprinting effects on rate and composition of pig growth. Theoretical and Applied Genetics 88, 10371042.10.1007/BF00220813CrossRefGoogle ScholarPubMed
Essl, A and Voith, K (2002) Estimation of variance components due to imprinting effects with DFREML and VCE: results of a simulation study. Journal of Animal Breeding and Genetics 119, 114.10.1046/j.1439-0388.2002.00314.xCrossRefGoogle Scholar
Hager, R, Cheverud, JM and Wolf, JB (2008) Maternal effects as the cause of parent-of origin effects that mimic genomic imprinting. Genetics 178, 17551762.CrossRefGoogle ScholarPubMed
Meyer, K (2007) WOMBAT – a tool for mixed model analyses in quantitative genetics by restricted maximum likelihood (REML). Journal of Zhejiang University Science B 8, 815821.CrossRefGoogle ScholarPubMed
Meyer, K and Tier, B (2012) Estimates of variances due to parent of origin effects for weights of Australian beef cattle. Animal Production Science 52, 215224.10.1071/AN11195CrossRefGoogle Scholar
Mokhtari, MS, Rashidi, A and Mohammadi, Y (2008) Estimation of genetic parameters for post-weaning traits of Kermani sheep. Small Ruminant Research 80, 2227.10.1016/j.smallrumres.2008.08.002CrossRefGoogle Scholar
Mokhtari, MS, Rashidi, A and Esmailizadeh, AK (2010) Estimates of phenotypic and genetic parameters for reproductive traits in Kermani sheep. Small Ruminant Research 88, 2731.CrossRefGoogle Scholar
Neugebauer, N, Luther, H and Reinsch, N (2010 a) Parent-of-origin effects cause genetic variation in pig performance traits. Animal: An International Journal of Animal Bioscience 4, 672681.10.1017/S1751731109991625CrossRefGoogle ScholarPubMed
Neugebauer, N, Rader, I, Schild, HJ, Zimmer, D and Reinsch, N (2010 b) Evidence for parent of origin effects on genetic variability of beef traits. Journal of Animal Science 88, 523532.10.2527/jas.2009-2026CrossRefGoogle ScholarPubMed
Rashidi, A, Mokhtari, MS, Safi Jahanshahi, A and Mohammad Abadi, MR (2008) Genetic parameter estimates of pre-weaning growth traits in Kermani sheep. Small Ruminant Research 74, 165171.10.1016/j.smallrumres.2007.06.004CrossRefGoogle Scholar
SAS (Statistical Analysis System) (2004) SAS Users’ Guide, Version 9.1. Cary, North Carolina, USA: SAS Institute Inc.Google Scholar
Smit, MK, Segers, LG, Carrascosa, T, Shay, F, Baraldi, G, Gyapay, G, Snowder, M, Georges, N, Cockett, N and Charlier, C (2003) Mosaicism of solid gold supports the causality of a noncoding A-to-G transition in the determinism of the callipyge phenotype. Genetics 163, 453456.CrossRefGoogle ScholarPubMed
Spencer, H (2002) The correlation between relatives on the supposition of genomic imprinting. Genetics 161, 411417.CrossRefGoogle ScholarPubMed
Tier, B and Meyer, K (2012) Analysing quantitative parent-of-origin effects with examples from ultrasonic measures of body composition in Australian beef cattle. Journal of Animal Breeding and Genetics 129, 359368.CrossRefGoogle ScholarPubMed