Hostname: page-component-586b7cd67f-vdxz6 Total loading time: 0 Render date: 2024-11-28T14:37:11.907Z Has data issue: false hasContentIssue false

Reactive Infection Control Strategy for Control of New Delhi Metallo-β-Lactamase (NDM)-Producing Enterobacteriaceae Analyzed Using Whole-Genome Sequencing: Hits and Misses

Published online by Cambridge University Press:  04 May 2016

Kalisvar Marimuthu*
Affiliation:
Department of Infectious Diseases, Institute of Infectious Diseases and Epidemiology, Tan Tock Seng Hospital, Singapore, Singapore Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
Oon Tek Ng
Affiliation:
Department of Infectious Diseases, Institute of Infectious Diseases and Epidemiology, Tan Tock Seng Hospital, Singapore, Singapore
Wei Xin Khong
Affiliation:
Department of Infectious Diseases, Institute of Infectious Diseases and Epidemiology, Tan Tock Seng Hospital, Singapore, Singapore
Eryu Xia
Affiliation:
NUS Graduate School for Integrative Sciences and Engineering, National University of Singapore, Singapore, Singapore
Yik-Ying Teo
Affiliation:
NUS Graduate School for Integrative Sciences and Engineering, National University of Singapore, Singapore, Singapore Centre for Infectious Disease Epidemiology and Research, Saw Swee Hock School of Public Health, National University of Singapore, Singapore, Singapore Department of Statistics and Applied Probability, National University of Singapore, Singapore, Singapore Life Sciences Institute, National University of Singapore, Singapore, Singapore Genome Institute of Singapore, Singapore, Singapore
Rick Twee-Hee Ong
Affiliation:
Centre for Infectious Disease Epidemiology and Research, Saw Swee Hock School of Public Health, National University of Singapore, Singapore, Singapore
David Chien Lye
Affiliation:
Department of Infectious Diseases, Institute of Infectious Diseases and Epidemiology, Tan Tock Seng Hospital, Singapore, Singapore Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore
Angela Liping Chow
Affiliation:
Department of Clinical Epidemiology, Institute of Infectious Diseases and Epidemiology, Tan Tock Seng Hospital, Singapore, Singapore
Prabha Krishnan
Affiliation:
Department of Laboratory Medicine, Tan Tock Seng Hospital, Singapore, Singapore.
Brenda Sze Ang
Affiliation:
Department of Infectious Diseases, Institute of Infectious Diseases and Epidemiology, Tan Tock Seng Hospital, Singapore, Singapore
*
Address correspondence to Kalisvar Marimuthu, Department of Infectious Diseases, 11 Jalan Tan Tock Seng, 308433 Singapore ([email protected]).

Abstract

Genetically distinct isolates of New Delhi metallo-β-lactamase (NDM)–producing Enterobacteriaceae were identified from the clinical cultures of 6 patients. Screening of shared-ward contacts identified 2 additional NDM-positive patients. Phylogenetic analysis proved that 1 contact was a direct transmission while the other was unrelated to the index, suggesting hidden routes of transmission.

Infect Control Hosp Epidemiol 2016;37:987–990

Type
Concise Communications
Copyright
© 2016 by The Society for Healthcare Epidemiology of America. All rights reserved 

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

Footnotes

PREVIOUS PRESENTATION. The Third International Conference on Prevention and Infection Control (ICPIC) in Geneva, Switzerland on June 13, 2015.

a

Authors with equal contribution.

References

REFERENCES

1. Bilavsky, E, Schwaber, MJ, Carmeli, Y. How to stem the tide of carbapenemase-producing Enterobacteriaceae? Proactive versus reactive strategies. Curr Opin Infect Dis 2010;23:327331.Google Scholar
2. CRE Toolkit: guidance for control of carbapenem-resistant Enterobacteriaceae (CRE). Centers for Disease Control and Prevention website. http://www.cdc.gov/hai/organisms/cre/cre-toolkit/. Published 2012. Accessed 15 November 2015.Google Scholar
3. Centers for Disease Control and Prevention. Laboratory protocol for detection of carbapenem-resistant or carbapenemase-producing, Klebsiella spp. and E. coli from rectal swabs. Atlanta, GA: US Department of Health and Human Services, CDC, 2009.Google Scholar
4. Samra, Z, Bahar, J, Madar-Shapiro, L, et al. Evaluation of CHROMagar KPC for rapid detection of carbapenem-resistant Enterobacteriaceae. J Clin Microbiol 2008;46:31103111.CrossRefGoogle ScholarPubMed
5. Xia E, Khong WX, Marimuthu K, et al. Draft genome sequence of a multidrug-resistant New Delhi metallo-beta-lactamase-1 (NDM-1)-producing Escherichia coli isolate obtained in Singapore. Genome Announcement 2013;1.Google Scholar
6. Zerbino, DR, Birney, E. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res 2008;18:821829.Google Scholar
7. Li, H, Handsaker, B, Wysoker, A, et al. The sequence alignment/map format and SAMtools. Bioinformatics 2009;25:20782079.Google Scholar
8. Croucher, NJ, Page, AJ, Connor, TR, et al. Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins. Nucleic Acids Res 2015;43:e15.CrossRefGoogle ScholarPubMed
9. Tamura, K, Stecher, G, Peterson, D, Filipski, A, Kumar, S. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol 2013;30:27252759.Google Scholar
10. Ben-David, D, Maor, Y, Keller, N, et al. Potential role of active surveillance in the control of a hospital-wide outbreak of carbapenem-resistant Klebsiella pneumoniae infection. Infect Control Hosp Epidemiol 2010;31:620626.CrossRefGoogle ScholarPubMed