Hostname: page-component-586b7cd67f-l7hp2 Total loading time: 0 Render date: 2024-11-24T12:46:38.390Z Has data issue: false hasContentIssue false

Mitochondrial genetics, circular DNA and the mechanism of the petite mutation in yeast

Published online by Cambridge University Press:  14 April 2009

G. D. Clark-Walker
Affiliation:
Departments of Developmental Biology and Genetics, Research School of Biological Sciences, The Australian National University, Canberra, A.C.T. 2601, Australia
George L. Gabor Miklos
Affiliation:
Departments of Developmental Biology and Genetics, Research School of Biological Sciences, The Australian National University, Canberra, A.C.T. 2601, Australia
Rights & Permissions [Opens in a new window]

Summary

Core share and HTML view are not available for this content. However, as you have access to this content, a full PDF is available via the ‘Save PDF’ action button.

We propose a general hypothesis involving properties of circular DNA which can explain such phenomena as the petite mutation, suppressiveness, and the polarity observed in mitochondrial recombination in the yeast Saccharomyces cerevisiae. This hypothesis involves excision and insertion events between circular DNA molecules as well as structural rearrangements in the DNA generated by these events. The special properties of circular DNA have been considered in analysing recombination, and a number of results are obtained which are not intuitively apparent.

This hypothesis can be applied to any situation involving circular DNA such as bacterial plasmids and cytoplasmic circular DNAs, where the opportunity exists for recombination and rearrangement events.

Type
Research Article
Copyright
Copyright © Cambridge University Press 1974

References

REFERENCES

Agsteribbe, E., Kroon, A. M. & Van Bruggen, E. F. J. (1972). Circular DNA from mitochondria of Neurospora crassa. Biochimica et Biophysica Acta 269, 299303.CrossRefGoogle ScholarPubMed
Bak, A. L., Christiansen, C. & Stenderup, A. (1969). Unusual physical properties of mitochondrial DNA in yeast. Nature 224, 270271.CrossRefGoogle ScholarPubMed
Bernardi, G., Carnevali, F., Nicolaieff, A., Piperno, G. & Tecce, G. (1968). Separation and characterization of a satellite DNA from a yeast cytoplasmic petite mutant. Journal of Molecular Biology 37, 493505.CrossRefGoogle ScholarPubMed
Bernardi, G., Piperno, G. & Fonty, G. (1972). The mitochondrial genome of wild-type yeast cells. I. Preparation and heterogeneity of mitochondrial DNA. Journal of Molecular Biology 65, 173189.CrossRefGoogle ScholarPubMed
Blamire, J., Cryer, D. R., Finkelstein, D. B. & Marmur, J. (1972). Sedimentation properties of yeast nuclear and mitochondrial DNA. Journal of Molecular Biology 67, 1124.CrossRefGoogle ScholarPubMed
Borst, P. & Kroon, A. M. (1969). Mitochondrial DNA: physicochemical properties, replication and genetic function. International Review of Cytology 26, 107190.CrossRefGoogle ScholarPubMed
Campbell, A. M. (1969). Episomes. New York: Harper and Row.Google Scholar
Carnevali, F., Falcone, C., Frontali, L., Leoni, L., Macino, G. & Palleschi, C. (1973). Informational content of mitochondrial DNA from a ‘low density’ petite mutant of yeast. Biochemical and Biophysical Research Communications 51, 651658.CrossRefGoogle ScholarPubMed
Carnevali, F. & Leoni, L. (1972). Intramolecular heterogeneity of yeast mitochondrial DNA. Biochemical and Biophysical Research Communications 47, 13221331.CrossRefGoogle ScholarPubMed
Carnevali, F., Morpurgo, G. & Tecce, G. (1969). Cytoplasmic DNA from petite colonies of Saccharomyces cerevsiae: ahypothesis on the nature of the mutation. Science 163, 13311333.CrossRefGoogle Scholar
Chen, S. Y., Ephrussi, B. & Hottinguer, H. (1950). Nature génétique des mutants a dé-ficience respiratoire de la souche B-II de la levure boulangerie. Heredity 4, 337351.CrossRefGoogle Scholar
Clark-Walker, G. D. (1972). Isolation of circular DNA from a mitochondrial fraction from yeast. Proceedings of the National Academy of Sciences, U.S.A. 69, 388392.CrossRefGoogle ScholarPubMed
Clark-Walker, G. D. & Gleason, F. H. (1973). Circular DNA from the water mold Sapro-legnia. Archiv für Mikrobiologie 92, 209216.CrossRefGoogle Scholar
Clark-Walker, G. D. & Linnane, A. W. (1967). The biogenesis of mitochondria in Saccharomyces cerevisiae. A comparison between cytoplasmic respiratory deficient mutant yeast and chloramphenicol inhibited wild-type cells. Journal of Cell Biology 34, 114.CrossRefGoogle ScholarPubMed
Clark-Walker, G. D. & Miklos, G. L. G. (1974). Localization and quantification of circular DNA in yeast. European Journal of Biochemistry 41, 359366.CrossRefGoogle ScholarPubMed
Clayton, D. A. & Brambl, R. M. (1972). Detection of circular DNA from mitochondria of Neurospora crassa. Biochemical and Biophysical Research Communications 46, 14771482.CrossRefGoogle ScholarPubMed
Clayton, D. A., Davis, R. W. & Vinograd, J. (1970). Homology and structural relationships between the dimeric and monomeric circular forms of mitochondrial DNA from human leukemic leukocytes. Journal of Molecular Biology 47, 137153.CrossRefGoogle ScholarPubMed
Coen, D., Deutsch, J., Netter, P., Petrochilo, E. & Slonimski, P. P. (1970). Mitochondrial genetics. I. Methodology and phenomenology. Symposia, Society for Experimental Biology 24, 449496.Google ScholarPubMed
Cohen, M., Casey, J., Rabinowitz, M. & Getz, G. S. (1972). Hybridization of mitochondrial transfer RNA and mitochondrial DNA in petite mutants of yeast. Journal of Molecular Biology 63, 441451.CrossRefGoogle ScholarPubMed
Crandall, M. (1973). A respiratory-deficient mutant in the obligately aerobic yeast Hansenula wingei. Journal of General Microbiology 75, 377381.CrossRefGoogle ScholarPubMed
Ephrussi, B. (1953). Nucleo-cytoplasmic Relations in Micro-organisms. Oxford: Clarendon Press.Google Scholar
Ephrussi, B., De Margerie-Hottinguer, H. & Roman, H. (1955). Suppressiveness: a new factor in the genetic determination of the synthesis of respiratory enzymes in yeast. Proceedings of the National Academy of Sciences, U.S.A. 41, 10651071.CrossRefGoogle Scholar
Faye, G., Fukuhara, H., Grandchamp, C., Lazowska, J., Michel, F., Casey, J., Getz, G. S., Locker, J., Rabinowitz, M., Bolotin-Fukuhara, M., Coen, D., Deutsch, J., Dujon, B., Netter, P. & Slonimski, P. P. (1973). Mitochondrial nuclei acids in the petite colonie mutants: deletions and repetitions of genes. Biochemie 55, 779792.CrossRefGoogle Scholar
Fredericq, P. (1969). In Bacterial Episomes and Plasmids (ed. Wolstenholme, G. W. E. and O'Connor, M.). London: J. & A. Churchill.Google Scholar
Fukuhara, H. (1969). Relative proportions of mitochondrial and nuclear DNA in yeast under various conditions of growth. European Journal of Biochemistry 11, 135139.CrossRefGoogle ScholarPubMed
Goldring, E. S., Grossman, L. I., Krupnick, D., Cryer, D. R. & Marmur, J. (1970). The petite mutation in yeast. Loss of mitochondrial deoxyribonucleic acid during induction of petites with ethidium bromide. Journal of Molecular Biology 52, 323325.CrossRefGoogle ScholarPubMed
Hartwell, L. (1970). Biochemical genetics of yeast. Annual Review of Genetics 4, 373396.CrossRefGoogle ScholarPubMed
Herman, A. I. & Griffin, P. S. (1968). Respiratory deficient mutants in Saccharomyces lactis. Journal of Bacteriology 96, 457461.CrossRefGoogle ScholarPubMed
Heslot, H., Louis, C. & Goffeau, A. (1970). Segregational respiratory-deficient mutants of a petite negative yeast Schizosaccharomyces pombe 972 h. Journal of Bacteriology 104, 482491.CrossRefGoogle Scholar
Hoffmann, H. P. & Avers, C. J. (1973). Mitochondrion of yeast. Ultrastructural evidence for one giant, branched organelle per cell. Science 181, 749751.CrossRefGoogle ScholarPubMed
Hollenberg, C. P. & Borst, P. (1971). Conditions that prevent rho-induction by ethidium bromide. Biochemical and Biophysical Research Communications 45, 12501254.CrossRefGoogle ScholarPubMed
Hollenberg, C. P., Borst, P., Flavell, R. A., Van Kreijl, C. F., Van Bruggen, E. F. J. & Arnberg, A. C. (1972). The unusual properties of mt-DNA from a ‘low density’ petite mutant of yeast. Biochimica et Biophysica Acta 277, 4458.CrossRefGoogle Scholar
Hollenberg, C. P., Borst, P. & Van Bruggen, E. F. J. (1970). Mitochondrial DNA. V. 25 micron closed circular duplex DNA molecule in wild-type yeast mitochondria. Structure and genetic complexity. Biochimica et Biophysica Acta 209, 115.CrossRefGoogle Scholar
Hollenberg, C. P., Borst, P. & Van Bruggen, E. F. J. (1972). Mitochondrial DNA from cytoplasmic petite mutants of yeast. Biochimica et Biophysica Acta 277, 3543.CrossRefGoogle ScholarPubMed
Howell, N., Trembath, M. K., Linnane, A. W. & Lukins, H. B. (1973). Biogenesis of mitochondria. 30. Analysis of polarity of mitochondrial gene recombination and transmission. Molecular and General Genetics 122, 3751.CrossRefGoogle ScholarPubMed
Hudson, B. & Vinograd, J. (1967). Catenated circular DNA molecules in Hela cell mitochondria. Nature 216, 647652.CrossRefGoogle ScholarPubMed
Linnane, A. W., Saunders, G. W., Gingold, E. B. & Lukins, H. B. (1968). The biogenesis of mitochondria. V. Cytoplasmic inheritance of erythromycin resistance in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences, U.S.A. 59, 903910.CrossRefGoogle ScholarPubMed
Maroudas, N. G. & Wilkie, D. (1968). Ultraviolet irradiation studies on the cytoplasmic determinant of the yeast mitochondrion. Biochimica et Biophysica Acta 166, 681688.CrossRefGoogle ScholarPubMed
Mehrotra, B. D. & Mahler, H. R. (1968). Characterization of some unusual DNAs from mitochondria from certain petite strains of Saccharomyces cerevisiae. Archives of Biochemistry and Biophysics 128, 685703.CrossRefGoogle ScholarPubMed
Michaelis, G., Douglass, S., Tsai, M. J. & Criddle, R. S. (1970). Mitochondrial DNA and suppressivenes of petite mutants in Saccharomyces cerevisiae. Biochemical Genetics 5, 487495.CrossRefGoogle Scholar
Michaelis, G., Petrochilo, E. & Slonimski, P. P. (1973). Mitochondrial genetics. III. Recombined molecules of mitochondrial DNA obtained from crosses between cytoplasmic petite mutants of Saccharomyces cerevisiae: physical and genetic characterization. Molecular and General Genetics 123, 5165.CrossRefGoogle Scholar
Mounolou, J., Jacob, H. & Slonimski, P. P. (1966). Mitochondrial DNA from yeast petite mutants: specific changes of buoyant density corresponding to different cytoplasmic mutations. Biochemical and Biophysical Research Communications 24, 218224.CrossRefGoogle ScholarPubMed
Nagai, S., Yanagishima, N. & Nagai, H. (1961). Advances in the study of respiratory-deficient (RD) mutation in yeast and other micro-organisms. Bacteriological Reviews 25, 404426.CrossRefGoogle Scholar
Nagley, P. & Linnane, A. W. (1970). Mitochondrial DNA deficient petite mutants of yeast. Biochemical and Biophysical Research Communications 39, 989996.CrossRefGoogle ScholarPubMed
Nagley, P. & Linnane, A. W. (1972). Biogenesis of mitochondria. XXI. Studies on the nature of the mitochondrial genome in yeast: the degenerative effects of ethidium bromide on mitochondrial genetic information in a repiratory competent strain. Journal of Molecular Biology 66, 181193.CrossRefGoogle Scholar
Nass, M. M. K. (1969). Mitochondrial DNA: Advances, problems and goals. Science 165, 2535.CrossRefGoogle ScholarPubMed
Novick, R. P. (1969). Extrachromosomal inheritance in bacteria. Bacteriological Reviews 33, 210235.CrossRefGoogle ScholarPubMed
Piperno, G., Fonty, G. & Bernardi, G. (1972). The mitochondrial genome of wild-type yeast cells. II. Investigations on the compositional heterogeneity of mitochondrial DNA. Journal of Molecular Biology 65, 191205.CrossRefGoogle ScholarPubMed
Rank, G. H. (1973). Recombination in 3-factor crosses of cytoplasmically inherited antibiotic resistance mitochondrial markers in S. cervisiae. Heredity 30, 265271.CrossRefGoogle Scholar
Richmond, M. H. (1967). Associated diploids involving penicillinase plasmids in Staphylococcus aureus. Journal of General Microbiology 46, 8593.CrossRefGoogle ScholarPubMed
Sanders, J. P. M., Flavell, R. A., Borst, P. & Mol, J. N. M. (1973). Nature of the base sequences conserved in the mitochondrial DNA of a low density petite. Biochimica et Biophysica Acta 312, 441457.CrossRefGoogle ScholarPubMed
Shannon, C., Rao, A., Douglas, S. & Criddle, R. S. (1972). Recombination in yeast mitochondrial DNA. Journal of Supramolecular Struct. 1, 145152.CrossRefGoogle ScholarPubMed
Sherman, F. (1963). Respiration deficient mutants of yeast. I. Genetics. Genetics 48, 375385.CrossRefGoogle ScholarPubMed
Slontmski, P. P. (1968). In Biochemical Aspects of the Biogeneis of Mitochondria (ed. Slater, E. C., Tager, J. M., Papa, S. and Quagliariello, E.), p. 475. Bari: Adriatica Editrice.Google Scholar
Thomas, D. Y. & Wilkie, D. (1968). Recombination of mitochondrial drug resistance factors in Saccharomyces cerevisiae. Biochemical and Biophysical Research Communications 30, 368372.CrossRefGoogle ScholarPubMed
Vedel, F., Quetier, F., Bayen, M., Rode, A. & Dalmon, J. (1972). Intramolecular heterogeneity of mitochondrial and chloroplast DNA. Biochemical and Biophysical Research Communications 46, 972978.CrossRefGoogle Scholar
Wilkie, D. & Thomas, D. Y. (1973). Mitochondrial genetic analysis by zygote cell lineages in Sacchromyces cerevisiae. Genetics 73, 367377.CrossRefGoogle Scholar
Williamson, D. H. (1970). The effect of environmental and genetic factors on the replication of mitochondrial DNA in yeast. Symposia, Society for Experimental Biology 24, 247276.Google ScholarPubMed
Wolf, K., Sebald-Althaus, M., Schweyen, R. J. & Kaudewitz, F. (1971). Respiratory deficient mutants of Schizosaccharomyces pombe. I. Molecular and General Genetics 110, 101109.CrossRefGoogle Scholar
Wright, R. E. & Lederberg, J. (1957). Extranuclear transmission in yeast heterokaryons. Proceedings of the National Academy of Sciences, U.S.A. 43, 919923.CrossRefGoogle ScholarPubMed
Yunis, J. J. & Yasmineh, W. G. (1970). Satellite DNA in constitutive heterochromatin of the guinea pig. Science 168, 263265.CrossRefGoogle ScholarPubMed