Genealogical inference of closely related species based on microsatellites

CHRISTIAN SCHLÖTTERER

doi:10.1017/S0016672301005444

Abstract

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Despite their unmatched popularity in many research areas, microsatellites have not yet become a major tool for the inference of genealogical relationships of closely related species. Recent studies have successfully extended the repertoire of microsatellite analysis beyond population genetics and demonstrate that phylogenetic relationships of closely related species can be inferred accurately with fewer loci than previously assumed.

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Aldrich, Preston R Parker, George R Michler, Charles H and Romero-Severson, Jeanne 2003. Whole-tree silvic identifications and the microsatellite genetic structure of a red oak species complex in an Indiana old-growth forest. Canadian Journal of Forest Research, Vol. 33, Issue. 11, p. 2228.

Orsini, L Huttunen, S and Schlötterer, C 2004. A multilocus microsatellite phylogeny of the Drosophila virilis group. Heredity, Vol. 93, Issue. 2, p. 161.

Tuskan, Gerald A Gunter, Lee E Yang, Zamin K Yin, TongMing Sewell, Mitchell M and DiFazio, Stephen P 2004. Characterization of microsatellites revealed by genomic sequencing ofPopulus trichocarpa. Canadian Journal of Forest Research, Vol. 34, Issue. 1, p. 85.

Rungis, Dainis B�rub�, Yanik Zhang, Jun Ralph, Steven Ritland, Carol E. Ellis, Brian E. Douglas, Carl Bohlmann, J�rg and Ritland, Kermit 2004. Robust simple sequence repeat markers for spruce (Picea spp.) from expressed sequence tags. Theoretical and Applied Genetics, Vol. 109, Issue. 6, p. 1283.

FRANCK, P. CAMERON, E. GOOD, G. RASPLUS, J.‐Y. and OLDROYD, B. P. 2004. Nest architecture and genetic differentiation in a species complex of Australian stingless bees. Molecular Ecology, Vol. 13, Issue. 8, p. 2317.

Sokol, Kerry A and Williams, Claire G 2005. Evolution of a triplet repeat in a conifer. Genome, Vol. 48, Issue. 3, p. 417.

Frumkin, Dan Wasserstrom, Adam Kaplan, Shai Feige, Uriel Shapiro, Ehud and Bonhoeffer, Sebastian 2005. Genomic Variability within an Organism Exposes Its Cell Lineage Tree. PLoS Computational Biology, Vol. 1, Issue. 5, p. e50.

Chirhart, Scott E. Honeycutt, Rodney L. and Greenbaum, Ira F. 2005. Microsatellite variation and evolution in the Peromyscus maniculatus species group. Molecular Phylogenetics and Evolution, Vol. 34, Issue. 2, p. 408.

BEHURA, SUSANTA K. 2006. Molecular marker systems in insects: current trends and future avenues. Molecular Ecology, Vol. 15, Issue. 11, p. 3087.

Kanno, Manami Suyama, Yoshihisa Li, Qi and Kijima, Akihiro 2006. Microsatellite Analysis of Japanese Sea Cucumber, Stichopus (Apostichopus) japonicus, Supports Reproductive Isolation in Color Variants. Marine Biotechnology, Vol. 8, Issue. 6, p. 672.

Li, ShuXian and Yin, TongMing 2007. Map and analysis of microsatellites in the genome of Populus: The first sequenced perennial plant. Science in China Series C: Life Sciences, Vol. 50, Issue. 5, p. 690.

Augustinos, Antonios A Stratikopoulos, Elias E Drosopoulou, Eleni Kakani, Evdoxia G Mavragani-Tsipidou, Penelope Zacharopoulou, Antigone and Mathiopoulos, Kostas D 2008. Isolation and characterization of microsatellite markers from the olive fly, Bactrocera oleae, and their cross-species amplification in the Tephritidae family. BMC Genomics, Vol. 9, Issue. 1,

Jørgensen, Marte Holten Carlsen, Tor Skrede, Inger and Elven, Reidar 2008. Microsatellites resolve the taxonomy of the polyploid Cardamine digitata aggregate (Brassicaceae). TAXON, Vol. 57, Issue. 3, p. 882.

Eggert, L. S. Beadell, J. S. McClung, A. McIntosh, C. E. and Fleischer, R. C. 2009. Evolution of Microsatellite Loci in the Adaptive Radiation of Hawaiian Honeycreepers. Journal of Heredity, Vol. 100, Issue. 2, p. 137.

Stratikopoulos, E. E. Augustinos, A. A. Pavlopoulos, I. D. Economou, K. Ph. Mintzas, A. Mathiopoulos, K. D. and Zacharopoulou, Antigone 2009. Isolation and characterization of microsatellite markers from the Mediterranean fruit fly, Ceratitis capitata: cross-species amplification in other Tephritidae species reveals a varying degree of transferability. Molecular Genetics and Genomics, Vol. 282, Issue. 3, p. 283.

Le, Son Nock, Catherine Henson, Michael and Shepherd, Mervyn 2009. Genetic differentiation among and within three red mahoganies (series Annulares), Eucalyptus pellita, E. resinifera and E. scias (Myrtaceae). Australian Systematic Botany, Vol. 22, Issue. 5, p. 332.

Hadjistylli, Margarita Brown, Judith K. and Roderick, George K. 2009. Bemisia: Bionomics and Management of a Global Pest. p. 69.

Yin, T. M. Zhang, X. Y. Gunter, L. E. Li, S. X. Wullschleger, S. D. Huang, M. R. and Tuskan, G. A. 2009. Microsatellite primer resource for Populus developed from the mapped sequence scaffolds of the Nisqually‐1 genome. New Phytologist, Vol. 181, Issue. 2, p. 498.

Gayral, Philippe Blondin, Laurence Guidolin, Olivier Carreel, Françoise Hippolyte, Isabelle Perrier, Xavier and Iskra-Caruana, Marie-Line 2010. Evolution of Endogenous Sequences of Banana Streak Virus : What Can We Learn from Banana ( Musa sp.) Evolution? . Journal of Virology, Vol. 84, Issue. 14, p. 7346.

Xu, Meng Sun, Yaguang and Li, Huogen 2010. EST-SSRs development and paternity analysis for Liriodendron spp. New Forests, Vol. 40, Issue. 3, p. 361.

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Genealogical inference of closely related species based on microsatellites

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