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Analysis of host preference and geographical distribution of Anastrepha suspensa (Diptera: Tephritidae) using phylogenetic analyses of mitochondrial cytochrome oxidase I DNA sequence data

Published online by Cambridge University Press:  09 March 2007

L.M. Boykin ,
R.G. Shatters Jr ,
D.G. Hall ,
R.E. Burns  and
R.A. Franqui
L.M. Boykin
Affiliation:
US Horticultural Research Laboratory, Subtropical Insects Unit, 2001 South Rock Road, Fort Pierce, Florida 34945, USA
R.G. Shatters Jr*
Affiliation:
US Horticultural Research Laboratory, Subtropical Insects Unit, 2001 South Rock Road, Fort Pierce, Florida 34945, USA
D.G. Hall
Affiliation:
US Horticultural Research Laboratory, Subtropical Insects Unit, 2001 South Rock Road, Fort Pierce, Florida 34945, USA
R.E. Burns
Affiliation:
Division of Plant Industry, Florida Department of Agriculture and Consumer Services, 3513 South US 1, Fort Pierce, Florida 34982, USA
R.A. Franqui
Affiliation:
Botanical Garden South, 1193 Guyacan Street, San Juan, Puerto Rico 00926-1118
*
*Fax: 001 772 462 5986 E-mail: [email protected]
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Abstract

Anastrepha suspensa (Loew) is an economically important pest, restricted to the Greater Antilles and southern Florida. It infests a wide variety of hosts and is of quarantine importance in citrus, a multi-million dollar industry in Florida. The observed recent increase in citrus infested with A. suspensa in Florida has raised questions regarding host-specificity of certain populations and genetic diversity of the pest throughout its geographical distribution. Cytochrome oxidase I (COI) DNA sequence data was used to characterize the genetic diversity of A. suspensa from Florida and Caribbean populations reared from different host plants. Maximum likelihood and Bayesian phylogenetic methods were used to analyse COI data. Sequence variation among mitochondrial COI genes from 107 A. suspensa samples collected throughout Florida and the Caribbean ranged between 0 and 10% and placed all A. suspensa as a monophyletic group that united all A. suspensa in a clade sister to a Central American group of the A. fraterculus paraphyletic species complex. The most likely tree of the COI locus indicated that COI sequence variation was too low to provide resolution at the subspecies level, therefore monophyletic groups based on host-plant use, geography (Florida, Jamaica, Cayman Islands, Puerto Rico or Dominican Republic) or population sampled are not supported. This result indicates that either no population segregation has occurred based on these biological or geographical distinctions and that this is a generalist, polyphagous invasive genotype. Alternatively, if populations are distinct, the segregation event was more recent than can be distinguished based on COI sequence variation.

Keywords

Anastrepha suspensaCaribbean fruit flyfraterculusgenetic variationfruit flies
Type
Research Article
Information
Bulletin of Entomological Research , Volume 96 , Issue 5 , October 2006 , pp. 457 - 469
Copyright
Copyright © Cambridge University Press 2006

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References

Aluja, M. (1994) Bionomics and management of Anastrepha. Annual Review of Entomology 39, 155–178.CrossRefGoogle Scholar
Aluja, M., Pinero, J., Jacome, I., Diaz-Fleischer, F. & Sivinski, J.M. (1999) Behavior of flies in the genus Anastrepha (Trypetinae: Toxotrypanini). pp.375–406in Aluja, M. & Norrbom, A.L.(Eds) Fruit flies (Tephritidae): phylogeny and evolution of behavior. Boca Raton, Florida, CRC Press.CrossRefGoogle Scholar
Barr, N.B., Liwang, C. & McPheron, B.A. (2005) Molecular systematics of nuclear period in genus Anastrepha (Tephritidae). Annals of the Entomological Society of America 98, 173–180.CrossRefGoogle Scholar
Burk, T. (1983) Behavioral ecology of mating in the Caribbean fruit fly, Anastrepha suspensa (Loew) (Diptera: Tephritidae). Florida Entomologist 66, 330–344.Google Scholar
Feder, J.L., Berlocher, S.H., Roethele, J.B., Dambroski, H., Smith, J.J., Perry, W.L., Gavriolovic, V., Filchak, K.E., Rull, J. & Aluja, M. (2003) Allopatric genetic origins for sympatric host-plant shifts and race formation in Rhagoletis. Proceedings of the National Academy of Sciences, USA 100, 10314–10319.Google Scholar
Feder, J.L., Reynolds, K., Go, W. & Wang, E.C. (1995) Intra- and interspecific competition and host race formation in the apple maggot fly, Rhagoletis pomonella (Diptera: Tephritidae). Oecologia 101, 416–425.CrossRefGoogle Scholar
Felsenstein, J. (1981) Evolutionary trees from DNA sequences: a maximum likelihood approach. Journal of Molecular Evolution 17, 368–376.CrossRefGoogle ScholarPubMed
Fritz, A.H. & Schable, N. (2004) Microsatellite loci from the Caribbean fruit fly, Anastrepha suspensa (Diptera: Tephritidae). Molecular Ecology Notes 4, 443–445.Google Scholar
Gene Codes Corporation, I(2004) Sequencher 4.2. Gene Codes Corporation, Inc. Madison, Wisconsin.Google Scholar
Green, P.J. (1995) Reversible jump Markov chain Monte Carlo computation and Bayesian model determinations. Biometrika 82, 711–732.CrossRefGoogle Scholar
Han, H.Y. & McPheron, B.A. (1999) Nucleotide sequence data as a tool to test phylogenetic relationships among higher groups of Tephritidae: a case study using mitochondrial ribosomal DNA. pp. 115–132in Aluja, M. & Norrbom, A.L.(Eds)Fruit flies (Tephritidae): phylogeny and evolution of behavior. Boca Raton, FloridaCRCPress.Google Scholar
Hasegawa, M., Kishino, H. & Yano, T. (1985) Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution 22, 160–174.CrossRefGoogle ScholarPubMed
Hastings, M.K. (1970) Monte Carlo sampling methods using Markov chains and their applications. Biometricka 57, 97–109.CrossRefGoogle Scholar
Heath, M., Kuhn, D., Schnell, R. & Olano, C. (2002) Mitochondrial DNA restriction map for the Caribbean fruit fly, Anastrepha suspensa, and occurrence of mitochondrial DNA diversity within highly inbred colonies. Biochemical Genetics 40, 283–292.CrossRefGoogle ScholarPubMed
Huelsenbeck, J.P. & Ronquist, F. (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17, 754–755.CrossRefGoogle ScholarPubMed
Huelsenbeck, J.P. & Ronquist, F. (2003) MrBayes 3Khgr Bayesian phylogenetic inference under mixed models. Bioinformatics. 19, 1572–1574.Google Scholar
Jamnongluk, W., Baimai, V. & Kittayapong, P. (2003) Molecular phylogeny of tephritid fruti flies in the Bactrocera tau complex using the mitochondrial COI sequences. Genome 46, 112–118.CrossRefGoogle Scholar
Kishino, H. & Hasegawa, M. (1989) Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in the Hominoidea. Journal of Molecular Evolution 29, 170–179.CrossRefGoogle ScholarPubMed
Larget, B. & Simon, D. (1999) Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees Molecular Biology and Evolution 16, 111–120.CrossRefGoogle Scholar
Maddison, W.P. & Maddison, D.R. (2000) MacClade: analysis of phylogeny and character evolution. Sunderland, MassachusettsSinauer Associates, Inc. Publishers.Google Scholar
McPheron, B.A., Han, H.Y., Silva, J.G. & Norrbom, A.L. (1999) Phylogeny of the genus Anastrepha and Toxotrypana (Trypetinae: Toxotrypanini) based upon 16S rRNA mitochondrial DNA sequences. pp. 343–361in Aluja, M., Norrbom, A.L.(Eds) Fruit flies (Tephritidae):; phylogeny and evolution of behavior Boca Raton, FloridaCRC Press.Google Scholar
Meixner, M.D., McPheron, B.A., Silva, J.G., Gasparich, G.E., Sheppard, W.S. (2002) The Mediterranean fruit fly in California: evidence for multiple introductions and persistent populations based on microsatellite and mitochondrial DNA variability. Molecular Ecology 11, 891–899.CrossRefGoogle ScholarPubMed
Metropolis, N., Rosenbluth, A.W., Rosenbluth, M.N., Teller, A.H. & Teller, E. (1953) Equations of state calculations by fast computing machines. Journal of Chemical Physics 21, 1087–1091.CrossRefGoogle Scholar
Morgante, J.S., Malavasi, A. & Bush, G.L. (1980) Biochemical systematics and evolutionary relationships of Neotropical Anastrepha. Annals of the Entomological Society of America 73, 622–630.CrossRefGoogle Scholar
Nardi, F., Carapelli, A., Dallai, R., Roderick, G.K. & Frati, F. (2005) Population structure and colonization history of the olive fly, Bactrocera oleae (Diptera, Tephritidae);. Molecular Ecology 14, 2729–2738.CrossRefGoogle Scholar
Norrbom, A.L., Zucchi, R.A. & Hernandez-Ortiz, V. (1999) Phylogeny of the genera Anastrepha and Toxotrypana (TrypetinaeKHgr; Toxotrypanini) based on morphology.299–342in Aluja, M. & Norrbom, A.L.(Eds) Fruit flies (Tephritidae)KHgr; phylogeny and evolution of behavior Boca Raton, Florida, CRC Press.Google Scholar
Posada, D. & Crandall, K.A. (1998) MODELTESTKHgr; Testing the model of DNA substitution. Bioinformatics 14, 817–818.Google Scholar
Rambaut, A. (2000) Se-Al: Sequence Alignment Editor v2.0. Oxford, University of Oxford.Google Scholar
Riherd, C. & Jenkins, C. (1996) Citrus production areas maintinaed free of Caribbean fruit fly for export certification. pp.in Rosen, D., Bennet, F.D. & Capinera, J.L.Pest Management in the subtropics: integrated pest management – a Florida perspective Andover, HantsIntercept Limited.Google Scholar
Schnell, R.J., Madeira, P.M., Hennessey, M.K. & Sharp, J.L. (1996) Inheritance of random amplified polymorphic DNA markers in Anastrepha suspensa (DipteraKHgr; Tephritidae). Annals of the Entomological Society of America 89, 122–128.CrossRefGoogle Scholar
Shi, W., Kerdelhue, C. & Ye, H. (2005) Population genetics of the Oriental fruit fly, Bactrocera dorsalis (Diptera: Tephritidae);, in Yunan (China) based on mitochondrial DNA sequences. Enviromental Entomology 34, 977–983.CrossRefGoogle Scholar
Shimodaira, H. & Hasegawa, M. (1999) Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Molecular Biology and Evolution 16, 1114–1116.CrossRefGoogle Scholar
Silva, J.G., Meixner, M.D., McPheron, B.A., Steck, G.J. & Sheppard, W.S. (2003) Recent Mediterranean fruit fly (Diptera: Tephritidae); infestations in Florida – a genetic perspective. Journal of Economic Entomology 96, 1711–1718.CrossRefGoogle ScholarPubMed
Simon, C., Frati, F., Beckenbach, A.Crespi, B.Lui, H.Flook, P. (1994) Evolution, weighting, and phylogenetic utility of mitochondirial gene sequences and a compilation of conserved polymerase chain reaction ‘primers’. Annals of the Entomological Society of America 87, 651–701.Google Scholar
Sivinski, J.M., Aluja, M., Pinero, J. & Ojeda, M. (2004) Novel analysis of spatial and temporal patterns of resource use in a group of tephritid flies of the genus Anastrepha. Annals of the Entomological Society of America 97, 504–512.CrossRefGoogle Scholar
Smith-Caldas, M.R.B., McPheron, B.A., Silva, J.G. & Zucchi, R. (2001) Phylogenetic relationships among species of the fracterculus group (Anastrepha: Diptera: Tephritidae) inferred from DNA sequences of mitochondrial cytochrome oxidase I. Neotropical Entomology 30, 565–573.CrossRefGoogle Scholar
Steck, G.J. (1991) Biochemical systematics and population genetic structure of Anastrepha fraterculus and related species (Diptera: Tephritidae). Annals of the Entomological Society of America 84, 10–28.CrossRefGoogle Scholar
Steck, G.J. & Sheppard, W.S. (1993) Mitochondrial DNA variation in Anastrepha fraterculus 9–14in Aluja, M., Liedo, P.(Eds) Fruit flies: biology and management New YorkSpringer-Verlag.CrossRefGoogle Scholar
Stone, A. (1942) The fruit flies of the genus Anastrepha. USDA Miscellaneous Publication 439, 112.Google Scholar
Swofford, D.L. (2003) PAUP*: Phylogenetic analysis using parsimony (*and other methods). Sunderland, Massachuesetts, Sinauer Associates.Google Scholar
Swofford, D.L., Olsen, G.J., Waddell, P.J. & Hillis, D.M. (1996) Phylogenetic inference. pp. 407–514in Hillis, D.M., Moritz, C. & Mable, B.K.(Eds) Molecular systematics. 2nd edn. Sunderland, MassachusettsSinauer Associates, Inc.Google Scholar
Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F. & Higgins, D.G. (1997) The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 24, 4876–4882.Google Scholar
Webb, S.D. (1990) Historical biogeography.in Myers, R.L. & Ewer, J.J.Ecosystems of Florida Orlando, University of Central Florida Press.Google Scholar
Weems, H.V. Jr (1965) Anastrepha suspensa (Loew) (Diptera: Tephritidae). Entomological Circular Number, vol.38, Division of Plant Industry, FloridaDepartment of Agriculture.Google Scholar
Weems, H.V. Jr, Heppner, J.B., Fasulo, T.R. & Nation, J.L. (2001 Caribbean fruit fly, Anastrepha suspensa (Loew) (Insecta: Diptera: Tephritidae). EENY-196, Featured Creatures from the Entomology and Nematology Department, Florida Cooperative Extension Service, Insitute of Food and Agricultural Sciences. University of Florida.Google Scholar