Birds play a central role in the epidemiology of several flaviviruses of concern for public and veterinary health. Seabirds represent the most abundant and widespread avifauna in the western Indian Ocean and may play an important role as host reservoirs and spreaders of arthropod-borne pathogens such as flaviviruses. We report the results of a serological investigation based on blood samples collected from nine seabird species from seven islands in the Indian Ocean. Using a commercial competitive enzyme-linked immunosorbent assay directed against the prototypic West Nile flavivirus, antibodies against flaviviruses were detected in the serum of 47 of the 855 seabirds tested. They were detected in bird samples from three islands and from four bird species. Seroneutralization tests on adults and chicks suggested that great frigatebirds (Fregata minor) from Europa were infected by West Nile virus during their non-breeding period, and that Usutu virus probably circulated within bird colonies on Tromelin and on Juan de Nova. Real-time polymerase chain reactions performed on bird blood samples did not yield positive results precluding the genetic characterization of flavivirus using RNA sequencing. Our findings stress the need to further investigate flavivirus infections in arthropod vectors present in seabird colonies.

The pantropical red-footed booby Sula sula is one of the most polymorphic seabirds. In the Indian Ocean most extant colonies hold white morph adults except on Europa Island (southern Mozambique Channel), where adults are of the white-tailed brown morph and on Tromelin Island (western Indian Ocean), where one-third of the birds are of the white-tailed brown morph and two-thirds are of the white morph. On Tromelin, the morph ratio has remained constant over the last 40 years. An extinct colony (Glorieuses Islands, northern Mozambique Channel) once supported a white-tailed brown morph population. These results suggest that the colonies of the western Indian ocean do not constitute one great gene pool where exchanges occur, but are isolated at various degree from each other. Particularly, the population of Europa is the only current population of the Indian Ocean constituted almost entirely of white-tailed brown morph, suggesting that it is isolated from other nearby colonies. Possible causes of isolation are discussed in the light of oceanic features of the Mozambique Channel. Although further studies are needed to understand the adaptive significance of plumage coloration in red-footed boobies, I suggest that white-tailed brown morph at Europa may act as a defensive camouflage against kleptoparasitism by great frigatebirds Fregata minor and brown skuas Catharacta antarctica.