The Sahara was wetter and greener during multiple interglacial periods of the Quaternary, when some have suggested it featured very large (mega) lakes, ranging in surface area from 30,000 to 350,000 km2. In this paper, we review the physical and biological evidence for these large lakes, especially during the African Humid Period (AHP) 11–5 ka. Megalake systems from around the world provide a checklist of diagnostic features, such as multiple well-defined shoreline benches, wave-rounded beach gravels where coarse material is present, landscape smoothing by lacustrine sediment, large-scale deltaic deposits, and in places, tufas encrusting shorelines. Our survey reveals no clear evidence of these features in the Sahara, except in the Chad basin. Hydrologic modeling of the proposed megalakes requires mean annual rainfall ≥1.2 m/yr and a northward displacement of tropical rainfall belts by ≥1000 km. Such a profound displacement is not supported by other paleo-climate proxies and comprehensive climate models, challenging the existence of megalakes in the Sahara. Rather than megalakes, isolated wetlands and small lakes are more consistent with the Sahelo-Sudanian paleoenvironment that prevailed in the Sahara during the AHP. A pale-green and discontinuously wet Sahara is the likelier context for human migrations out of Africa during the late Quaternary.

A late Holocene carbonate spring mound and associated wetland deposits at Cienega Amarilla, New Mexico, contain a 4000-yr record of geomorphic, paleoenvironmental, and hydroclimatic change on the southern Colorado Plateau. Forty-four 14C dates support a century-scale chronostratigraphic framework. Pollen, plant macrofossil, mollusk, ostracode, and soil analyses indicate rapid spring mound growth and wetland expansion beginning ~2300 cal yr BP, followed by a pronounced decline in groundwater discharge (GWD) between ~1500 and 1000 cal yr BP. The isotopic composition of Cienega Amarilla springwater suggests GWD is driven primarily by winter precipitation. Historical climate data indicate that El Niño and warm Pacific Decadal Oscillation (PDO) conditions foster wetter-than-average winters in the Cienega Amarilla area, whereas dry winters are associated with La Niña conditions regardless of PDO phase. The ~2300–1500 cal yr BP Cienega Amarilla pluvial appears to represent an interval of peak, late Holocene cool-season precipitation that implies unusually strong or persistent El Niño–like and warm PDO–like conditions in the Pacific. Other southwestern paleoenvironmental records corroborate atypically wet conditions during this interval, and pluvial conditions related to increased winter precipitation likely fostered significant prehistoric cultural changes throughout the region, including increased sedentism, population, and dependence on agriculture.

Widespread, organic-rich diatomaceous deposits are evidence for formerly wetter times along the margins of the central Atacama Desert, one of the driest places on Earth today. We mapped and dated these paleowetland deposits at three presently waterless locations near Salar de Punta Negra (24.5°S) on the western slope of the Andes. Elevated groundwater levels supported phreatic discharge into wetlands during two periods: 15,900 to ~ 13,800 and 12,700 to ~ 9700 cal yr BP. Dense concentrations of lithic artifacts testify to the presence of paleoindians around the wetlands late in the second wet phase (11,000?–9700 cal yr BP). Water tables dropped below the surface before 15,900 and since 8100 cal yr BP, and briefly between ~ 13,800 and 12,700 cal yr BP. This temporal pattern is repeated, with some slight differences, in rodent middens from the study area, in both paleowetland and rodent midden deposits north and south of the study area, and in lake level fluctuations on the adjacent Bolivian Altiplano. The regional synchroneity of these changes points to a strengthening of the South American Monsoon — which we term the "Central Andean Pluvial Event" — in two distinct intervals (15,900–13,800 and 12,700–9700 cal yr BP), probably induced by steepened SST gradients across the tropical Pacific (i.e., La Niña-like conditions).