Uridine (U) insertion/deletion editing of mitochondrial
mRNAs in kinetoplastid protozoa is a posttranscriptional
process mediated by guide RNAs (gRNAs). The gRNAs direct
the precise insertion and deletion of Us by a cleavage–ligation
mechanism involving base pairing. We show that a cognate
gRNA in cis at the 3′ end of a preedited
NADH dehydrogenase 7 (ND7) mRNA substrate can direct U
insertions at editing site 1 when incubated with a mitochondrial
lysate from Leishmania tarentolae. The efficiency
of gRNA-dependent U insertion mediated by a cis-acting
gRNA is greater on a molar basis than that for a trans-acting
gRNA, as expected for a unimolecular gRNA:mRNA interaction.
Blocking the 3′ end of a cis-acting gRNA
lacking a 3′ oligo[U] tail has no effect
on gRNA-dependent U insertions, nor does providing the
gRNA in cis upstream of the mRNA, confirming the
previous observation that the terminal 2′- and 3′-hydroxyls
of the gRNA are not involved in U insertion activity. These
results also establish that the oligo[U] tail
is not required for U insertion in vitro. Increasing the
extent of base pairing between the 3′ end of the
gRNA and the 5′ end of the mRNA significantly increases
in vitro gRNA-dependent U insertion at site 1, presumably
by maintaining the mRNA 5′ cleavage fragment within
the editing complex. We speculate that, in vivo, protein:RNA
and/or protein:protein interactions may be responsible
for maintaining the mRNA 5′ cleavage fragment in
close proximity to the mRNA 3′ cleavage fragment,
and that such interactions may be rate limiting in vitro.