Subglacially erupted Neogene basaltic hyaloclastites in lava-fed deltas in Antarctica were found to contain putative endolithic microborings preserved in fresh glass along hydrous alteration boundaries. The location and existence over the past 6 Ma of these lava deltas has exposed them to successive interglacials and subsequent percolation of the hyaloclastite with marine water. A statistical study of the hyaloclastites has found that endolithic microborings are distinctly more abundant within samples that show evidence for marine alteration, compared with those that have remained in a strictly freshwater (glacial) environment. Additionally, correlation between elevation and the abundance of microborings shows endolithic activity to be more prolific within lower elevation samples, where the hyaloclastites were influenced by marine fluids. Our study strongly suggests that endolithic microborings form more readily in marine-influenced, rather than freshwater environments. Indeed, marine fluids may be a necessary precondition for the microbial activity responsible. Thus, we suggest that the chemistry and origin of alteration fluids are controlling factors on the formation of endolithic microborings in basaltic glass. The study also contributes to the understanding of how endolithic microborings could be used as a biosignature on Mars, where basaltic lavas and aqueous alteration are known to have existed in the past.

Laser-based Fourier-Transform Raman spectroscopy (FTRS) has been used to identify in situ compounds of ecophysiological significance in diverse field-fresh Antarctic cryptoendolithic microbial communities. FTRS does not disrupt the community and permits characterization of visible and invisible compounds in their natural configuration within cells and their current or former microhabitat. The small “footprint” of the microscopic laser beam permits accurate analysis of discrete zones of compounds produced by extant or degraded micro-organisms with minimum destruction of the biota. This spatial chemical analysis is applicable to any translucent or exposed habitat or biotic assemblage. Two hydrated forms of biodegradative calcium oxalate were differentiated in black-pigmented and hyaline lichen zones of endolithic communities. The oxalate was restricted to zones containing fungi. Communities dominated by cyanobacteria at Battleship Promontory (77°S) and a newly discovered site at Timber Peak (74°S) contrasted chemically with those dominated by eukaryotic algae at East Beacon (78°S). FTRS also showed the zonation of pigments including chlorophyll and UV-protective carotenoids in situ. At extreme sites on the polar plateau, it revealed the presence of “fossil” endolithics where detrimental climatic changes had made the microbes non-viable or amorphous, being represented solely by their residual bio-molecules. The technique has potential for past or present life-detection anywhere in the world without destruction of the microniche.

‘Geomycology’ can be defined as the impact of fungi on geological processes, including the alteration and weathering of rocks and minerals, the accumulation of metals and their role in nutrient cycling and influence on proliferation of microbial communities in mineral substrates. Although many studies on microbial interactions with minerals have been published in recent years, the main focus of geomicrobiology has been on prokaryotes. Recently, it has become apparent that epi- and endolithic fungi comprise a significant component of the microflora in a wide range of rocks including siliceous types (silica, silicates and aluminosilicates), sandstone, granite, limestone, marble and gypsum. However, to date little is known about their in situ growth patterns or biogeochemical roles in such an environment. The aim of this article is to highlight our recent work on the biogeochemical roles of fungi inhabiting limestone (CaCO3) and dolomite (CaMg(CO3)2) rocks and to emphasise the importance of fungi as agents of geological change.

For activity and survival in extreme terrestrial Antarctic habitats, lithobiontic cyanobacteria depend on key biomolecules for protection against environmental stress and for optimization of growth conditions. Their ability to synthesize such molecules is central to their pioneering characteristics and major role as primary producers in Antarctic desert habitats. Pigmentation is especially important in protecting them against enhanced UVB damage during stratospheric ozone depletion (the Ozone Hole) during the Antarctic spring and subsequent photoinhibition in the intense insolation of the summer. To be effective, especially for the screening of highly shade-adapted photosystems of cyanobacteria, protective pigments need to be located strategically. Antarctic lithic cyanobacterial communities are therefore stratified, as in soil biofilms of Alexander Island, the benthic stromatolitic mats of ice-covered hypersaline lakes in the McMurdo Dry Valleys, and the endolithic communities within translucent Beacon sandstone outcrops of Victoria Land. The protective pigments include scytonemin, carotenoids, anthroquinones and mycosporine-like amino acids. To detect and locate photoprotective pigments in situ in free-living cyanobacteria and cyanolichens from hot and cold desert habitats, we have used Fourier-transform Raman micro-spectroscopy. With appropriate power inputs for labile molecules, this high-precision, non-intrusive laser-based technique can not only identify biomolecules in their natural state but also locate them spatially within the habitat relative to the components of the community, which require protection. In conjunction with direct and epifluorescence microscopy it provides a spatial and functional description of the protective strategy of a community. We present the unique Raman spectrum of scytonemin and use its primary and corroborative peaks to identify it within the plethora of other biochemical constituents of several natural cyanobacterial communities, including an Antarctic endolith. The remote-sensing aspect of this technique makes it suitable not only for spatial biochemical analysis of present and palaeontological Antarctic communities but also for analogous putative habitats on Mars.