Holocene occurrences of conifer needle endophytes have not previously been reported. We report the fossil remains of Lophodermium piceae (Fckl.) Hoehn., a fungal endophyte of black spruce (Picea mariana (Mill.) B.S.P.) needles, in macrofossils dating back to 8000 cal yr BP. Spruce budworm head capsules and L. piceae remains were found preceding charcoal layers delineating the transformation of four spruce−moss forest sites to spruce−lichen woodland. As L. piceae is found solely on senescent needles, its increased presence during these transformation periods likely indicates that the forests were in decline due to the spruce budworm (Choristoneura fumiferana (Clem.)) when they burned. Future paleoecological studies incorporating needle fungi observations could be used to investigate the historical occurrence of tree disease and the role of fungi in forest health and decline.