Members of Clibanarius virescens show considerable intraspecific colour variation, including colouration of the second/third pereopods (green/white) and the dactyls of the second/third pereopods (with or without dark bands/patches). However, factors inducing these colour variations have not yet been elucidated. Here, we investigated the occurrence of colour variation in this species with particular emphasis on change of colouration associated with growth stage and region in specimens from tropical/subtropical to warm temperate areas in the Indo–West Pacific, including evidence from molecular phylogeny based on the cytochrome c oxidase subunit I (COI). We have, then, clarified that the colouration on the pereopod dactyls gradually changed from solid colour (yellow/white) to having dark-coloured area(s) or transverse band(s) as a result of the growth stage. The frequency of occurrence of the solid colour dactyls was higher than those of other colour types in tropical regions. Our results also indicated that the white ambulatory leg type was the colouration type that was frequently seen in juvenile stages. However, significant genetic differences were not detected between each colouration determined by molecular analysis of samples from 14 localities in the Indo-West Pacific region; in contrast, two genetically differentiated regional populations (North Australia; Phuket, Thailand; and Lombok, Indonesia) were detected. The present study, therefore, emphasizes the necessity for further study on the colour variation of marine animals focusing on growth stages and regional differences, with molecular data to facilitate the research on adaptation and/or speciation, especially in geographically widely distributed species.

The evaluation of symbiotic microbial communities occurring in the intestinal tract of animals has received great interest in recent years. However, little is known about gut microbial communities in cetaceans, despite their relevance in the ecology of marine communities. Here, we report an investigation using 16S rRNA gene amplicon sequencing of the resident gut microbiota of the two cetacean species Stenella coeruleoalba and Tursiops truncatus by sampling intestinal mucosa from specimens retrieved stranded along the Tyrrhenian coast of Tuscany (Italy). We found an abundance of members from Clostridiaceae and Fusobacteriaceae, which in total accounted for more than 50% of reads, in agreement with gut microbiota composition of other carnivorous mammals. Probably due to the limited number of samples available, sex, preservation status and also species, did not correlate with overall differences in the microbiota. Indeed, a high similarity of the taxonomic (family-level) composition between the gut microbiota of the two species was found. However, Pedobacter spp. was found abundant in amplicon sequencing libraries from S. coeruleoalba, while clostridia were more abundant from T. truncatus samples. Our results shed some light on the gut microbiota composition of two dolphin (S. coeruleoalba and T. truncatus) species, with specimens collected in the wild. Studies with a larger number of individuals are now needed to confirm these first results and evaluate the interspecific differences in relation to sex and age.

With over a century of records, we present a detailed analysis of the spatial and temporal occurrence of marine turtle sightings and strandings in the UK and Ireland between 1910 and 2018. Records of hard-shell turtles, including loggerhead turtles (Caretta caretta, N = 240) and Kemp's ridley turtles (Lepidochelys kempii, N = 61), have significantly increased over time. However, in the most recent years there has been a notable decrease in records. The majority of records of hard-shell turtles were juveniles and occurred in the boreal winter months when the waters are coolest in the North-east Atlantic. They generally occurred on the western aspects of the UK and Ireland highlighting a pattern of decreasing records with increasing latitude, supporting previous suggestions that juvenile turtles arrive in these waters via the North Atlantic current systems. Similarly, the majority of the strandings and sightings of leatherback turtles (Dermochelys coriacea, N = 1683) occurred on the western aspects of the UK and the entirety of Ireland's coastline. In contrast to hard-shell turtles, leatherback turtles were most commonly recorded in the boreal summer months with the majority of strandings being adult sized, of which there has been a recent decrease in annual records. The cause of the recent annual decreases in turtle strandings and sightings across all three species is unclear; however, changes to overall population abundance, prey availability, anthropogenic threats and variable reporting effort could all contribute. Our results provide a valuable reference point to assess species range modification due to climate change, identify possible evidence of anthropogenic threats and to assess the future trajectory of marine turtle populations in the North Atlantic.

Structure and diversity of sessile zoobenthic assemblages seem to be driven not only by chemical-physical constraints and biological interactions but also by substrate lithology and its surface features. Nevertheless, broadly distributed crustose epilithic corallines could mask the role of substrate on animal settling. To evaluate the direct influence of different rocky substrates, occurrence and coverage of several sessile species, growing on the dark (i.e. coralline-free) face of sublittoral limestone and granite boulders were compared in the Tavolara MPA (Mediterranean Sea). The analysis of photographic samples demonstrated significant differences in terms of species composition and coverage, according to lithology. Moreover, limestone boulders were widely bare, while the cover per cent was almost total on granite. The leading cause of observed patterns could be the different level of dissolution of the two types of rocks, due to their different mineral composition and textural characteristics. Limestone has previously been shown to have higher dissolution compared with granite, and consequently, a more unstable surface. Our results suggest that, in dark habitats, the absence of the crustose coralline layer allows more rock dissolution and consequent lower stability of the limestone compared with granite, which, in turn, reduces the zoobenthos colonization.

Sardinella aurita has become an important source of fish protein-intake in NW African countries, where one stock is considered from Morocco to south Senegal, performing seasonal reproductive migrations along the coast. Although data are limited for the fisheries involved and for life-history knowledge of the species in the area, a precautionary approach is recommended to avoid overexploitation. Commercial landings of round sardinella produced by the European freezer-pelagic trawlers operating in Mauritanian waters were analysed between May 2004 and February 2012. The length-weight relationships (LWRs) (N = 40,725) did not show significant differences between sexes. Ripening round sardinellas were present throughout the year, but spawning effort rose between June and December. The length at first maturity for males and females was estimated at 27.7 cm TL (2.1 years) and 28.1 cm TL (2.2 years), respectively. Ages were interpreted from otoliths, varying from 0 to 8 years. Von Bertalanffy growth parameters resulted in non-statistically significant differences between sexes (P = 0.28). Natural mortality was estimated at ~0.63 year–1. The results provide important biological information for fisheries assessment of a species that plays an important key role in the current climate change scenario and for the economies of the riparian countries.

Since the mid-1980s, swarms of the rhizostome Rhopilema nomadica have been an annual phenomenon in Israeli Mediterranean coastal waters during the summer months. Despite its annual prominence and the potential impact on food webs and ecosystem services, studies concerning its feeding ecology and its interactions with other biota in the marine food web have not been conducted. During summer 2015 gut contents of 41 R. nomadica were analysed as well as ambient plankton assemblages. More than 60% of the medusae diet was found to consist of microzooplankton <150 μm. Size correlations revealed that larger R. nomadica consumed faster swimming prey while smaller medusae relied more on the slower swimming taxa. The medusan diet reflected most of the ambient plankton taxa, but no statistically significant correlations between the relative abundance in diet and ambient plankton were found. As summer progressed, there was a gradual decrease in both mean medusa bell diameter (from 42.2–16 cm) and integrity of feeding structures. These findings suggest that R. nomadica, at least at the time of its appearance in Israeli coastal waters, may exert less predatory pressure on the plankton than we might otherwise expect.

This work aimed to test whether the colour variability featured by the European nudibranch Polycera quadrilineata is consistent with the concept of a single polychromatic species or may hide multiple lineages. Samples from across the geographic range of P. quadrilineata together with representatives from worldwide species with a focus on Atlantic diversity, were gathered and studied using an integrative taxonomic approach. Morpho-anatomical characters were investigated by light and scanning electron microscopy. Bayesian molecular phylogenetics using MrBayes, the Automatic Barcode Gap Discovery species delimitation method, and haplotype network analysis using the PopArt software were employed to help delimit species using the mitochondrial gene cytochrome c oxidase subunit I (COI). The results supported the existence of a second species, here described and named Polycera norvegica sp. nov., only known from Norway where it is sympatric with P. quadrilineata. The COI uncorrected p-genetic distance between the two species was estimated at 9.6–12.4%. Polycera norvegica sp. nov. differs by exhibiting a black dotted or patchy dotted pattern occasionally with more or less defined orange/brown patches, but never black continuous or dashed stripes as in P. quadrilineata. The two species share a common colouration with a whitish base and yellow/orange tubercles. Anatomically, P. norvegica sp. nov. has a weaker labial cuticle, a smaller radula with fewer rows, and only four marginal teeth, a reproductive system with a single lobed bursa copulatrix, shorter reproductive ducts, and a penis armed with two kinds of spines: needle-like and hook-shaped penile spines.

Moulting is essential for crustacean growth, but is one of the causes of mortality, because a crustacean cannot move during and just after its ecdysis. In the cases of ectosymbiotic crabs, escape from the host's hostile response may also be a problem during its own ecdysis. In this study, Sestrostoma sp. (Varunidae), an ectosymbiotic crab which clings to the ventral abdomen of upogebiid shrimps with legs that can walk, was studied to clarify how the crab moults and maintains association with the host. Five cases of crab ecdysis were observed, where the crab moulted with its legs clinging to the host abdomen, without detaching from the host body. Time required for moulting was 14–21 min. Shedding of the old exoskeleton (active phase) took only 40–59 s. Sestrostoma sp. detached from the host abdomen and waited in the burrow tube during shrimp ecdysis. The crab then reattached at the same location on the host when shrimp moulting was complete. Our results suggest that Sestrostoma sp. are able to maintain a symbiotic relationship with the same shrimp host after its own ecdysis as well after ecdysis of its host.

The continental shelf edge of the NW Gulf of Mexico supports dozens of reefs and banks, including the West and East Flower Garden Banks (FGB) and Stetson Bank that comprise the Flower Garden Banks National Marine Sanctuary (FGBNMS). Discovered by fishermen in the early 1900s, the FGBs are named after the colourful corals, sponges and algae that dominate the region. The reefs and banks are the surface expression of underlying salt domes and provide important habitat for mesophotic coral ecosystems (MCE) and deep coral communities to 300 m depth. Since 2001, FGBNMS research teams have utilized remotely operated vehicles (e.g. ‘Phantom S2’, ‘Mohawk’, ‘Yogi’) to survey and characterize benthic habitats of this region. In 2016, a Draft Environmental Impact Statement proposed the expansion of the current sanctuary boundaries to incorporate an additional 15 reefs and banks, including Elvers Bank. Antipatharians (black corals) were collected within the proposed expansion sites and analysed using morphological and molecular methods. A new species, Distichopathes hickersonae, collected at 172 m depth on Elvers Bank, is described within the family Aphanipathidae. This brings the total number of black coral species in and around the sanctuary to 14.

We report the results of a survey of the fishes of Kāne‘ohe Bay, O‘ahu, conducted in 2017 as part of the Smithsonian Institution MarineGEO Hawaii bioassessment. We recorded 109 species in 43 families. The most speciose families were Acanthuridae (11 species), Gobiidae (11 species), Pomacentridae (10) and Chaetodontidae (9 species). Nine of the species that we collected are known or suspected to be introduced to the Hawaiian Islands. Specimens were identified, measured and photographed. All specimen vouchers were fixed in formalin and ultimately transferred to 75% ethanol for long-term storage. For nearly all species, we took multiple tissue samples from specimen vouchers prior to formalin-fixation; we preserved tissues in 95% ethanol and then stored them at −80°C. The 5′-end of the mitochondrial cytochrome oxidase I gene (mtCOI) was sequenced for 94 species to confirm their taxonomic identification. Using these barcode sequences, we also measured genetic distances between collected individuals and their conspecifics from other localities outside Hawaii to verify the hypothesis that Hawaiian populations of species broadly distributed throughout the Indo-Pacific may be genetically distinct. We present select case studies to demonstrate the potential for undiscovered endemism in the Hawaiian fish biota.

A new species of ampithoid amphipod, Sunamphitoe gigantea sp. nov., is described from Katsurakoi, Hokkaido, Japan. The new species most closely resembles S. eoa, but can be distinguished from it by the shorter flagellum of antenna 1, the maxilla 1 inner plate that bears two slender setae, the short dactylus of male gnathopod 2, and the presence of a group of long setae on anterior margins of pereopods 3 and 4 bases. Nucleotide sequences of mitochondrial cytochrome c oxidase subunit I obtained from the type specimens also differentiated this new species from the congeners. Ontogenetic morphological changes of the male gnathopod 2 are briefly discussed.

For many benthic marine invertebrates, inversion (being turned upside-down) is a common event that can increase vulnerability to predation, desiccation and unwanted spatial transport, and requires behavioural ‘self-righting’ to correct. While self-righting behaviour has been studied for more than a century, the repeatability (R) – the portion of behavioural variance due to inter-individual differences – of this trait is not well understood. Heritability and the evolution of animal behaviour rely on behavioural repeatability. Here, we examined the self-righting technique of a cold-water holothurid, Parastichopus tremulus, and assessed the repeatability of this behaviour. Under laboratory conditions, P. tremulus consistently used muscle contractions to curl its body and roll itself back to an upright position, which provided for rapid (x̅ ± SD = 96.7 ± 49.8 s) and highly repeatable (R = 0.75) self-righting in the short term that varied between individuals (range of individual average righting times = 34.8–217.0 s). Righting time tended to increase with animal size; however, substantial variation was evident at comparable sizes, as average righting time ranged from 34.8–155.5 s for animals ~20 cm in body length. Contrary to previous studies on other echinoderms, we found no evidence of improved righting times for P. tremulus over time. This study ultimately provides the first detailed documentation of self-righting behaviour for P. tremulus and suggests that this species displays a high degree of repeatability for this trait in the short term.

The flat oyster Ostrea edulis has declined significantly in European waters since the 1850s as a result of anthropogenic activity. Ostrea edulis was designated a UK Biodiversity Action Plan Species and Habitat in 1995, and as a Feature of Conservation Importance (FOCI) within the UK Marine & Coastal Access Act 2009. To promote the recovery of oyster beds, a greater understanding of its abundance and distribution is required. Distribution of O. edulis across the proposed Blackwater, Crouch, Roach and Colne MCZ in Essex was determined between 2008 and 2012. Ostrea edulis were present in four estuary zones; with highest sample abundance in the Blackwater and Ray Sand zones. Size structure of populations varied, with the Ray Sand and Colne zones showing a significant lack of individuals with shell height <39 mm. Ostrea edulis occurred in highest number on shell substratum, followed by silty sediments. There were no significant associations between O. edulis abundance or size structure with water column Chl a, suspended solids, oxygen, nitrate or ammonium concentrations, temperature or pH. Highest abundance and most equitable population shell-size distribution for O. edulis were located within, or adjacent to, actively managed aquaculture zones. This suggests that traditional seabed management contributed to the maintenance or recovery of the species of conservation concern. Demonstration that the Essex estuaries were a stronghold for Ostrea edulis in the southern North sea area led to the designation of the Blackwater, Crouch, Roach and Colne estuaries Marine Conservation Zone in 2013.

Introductions of predators can have strong effects on native ecosystems and knowledge of the prey size selection of invasive predators is pivotal to understand their impact on native prey and intraguild competitors. Here, we investigated the prey size selection of two invasive crabs (Hemigrapsus sanguineus and Hemigrapsus takanoi) recently invading European coasts and compared them with native shore crabs (Carcinus maenas) which are known to feed on similar prey species. In laboratory experiments, we offered different size classes of native blue mussels (Mytilus edulis) to different size classes of the crab species in an effort to identify the respective prey size preferences and potential overlap in prey size range of native and invasive crabs. In all three species, the preferred prey size increased with crab size reflecting general predator–prey size relationships. Prey size preference did not differ among the crab species, i.e. crabs showed similar mussel size preference in relation to carapace width. Given that additional morphological measurements showed that both of the invasive crab species have much larger claws relative to their body size compared with the native species, this finding was surprising and may relate to differential claw morphologies or structural strength. These results suggest that the invasive crabs exert predation pressure on the same size classes of native mussels as the native crabs, with potential effects on mussel population dynamics due to the high densities of the invaders. In addition, the overlap in prey size range is likely to result in resource competition between invasive and native crabs.

Nutrient enrichment is a significant cause of ecosystem change in coastal habitats worldwide. This study focuses on the change in a benthic macroinvertebrate community and environmental quality as assessed through different biotic indices following the construction of a sewage outfall pipe in the west of Scotland, from first implementation to seven years after operation of the pipe. Benthic macroinvertebrates are an important part of marine ecosystems because they mediate ecosystem processes and functions, are a key part of food webs and they provide many ecosystem services. Results indicated a clear change in benthic communities over time with an increase in species richness and changes to benthic community composition (specifically feeding type, bioturbation mode and ecological group) towards those indicative of organic enrichment. No clear spatial zonation was observed because organic carbon content increased over the entire area. According to a suite of benthic indices calculated, some negative changes were detectable following the start of sewage disposal, but largely negative community changes, and a change from ‘good’ to ‘moderate’ quality, only occurred seven years after implementation. The increase in species richness in response to increasing disturbance reduced the utility of a multi-metric index, the Infaunal Quality Index, which, instead of amplifying the signal of negative impact, dampened it. We suggest that any change in communities, regardless of direction, should be heeded, and species richness is a particularly sensitive and early warning indicator for this, but a suite of approaches is required to understand benthic community changes.

Structural and functional properties of exoskeleton in moulting sea slaters Ligia pallasii from the Eastern Pacific coast were investigated with CT scanning and electron microscopy. Ultrastructure of preecdysial and postecdysial cuticular layers was described in premoult, intramoult and postmoult animals. Cuticle is a flexible extracellular matrix connected to the epidermal cells through pore channels. During premoult epicuticle and exocuticle are formed and during intramoult and postmoult endocuticular lamellae are deposited and the cuticle is progressively constructed by thickening and mineralization. Cuticle permeability, flexibility and waterproofing capacity change accordingly. Elaboration of epicuticular scales connected to an extensive network of nanotubules, establish its anti-adhesive and hydrophobic properties. Labelling with gold conjugated WGA lectins on Tokuyashu thawed cryosections exposes differences in chitin content between exocuticle and endocuticle. Histochemical staining of cuticle shows presence of acidic carbohydrates/glycoconjugates and lipoproteins in epicuticular layer. Chitin microfibrils are formed at the microvillar border of epidermal cells with abundant Golgi apparatus and secretory vesicles. Numerous spherules associated with nanotubules were observed in the ecdysial space in intramoult animals. The mineral component of the cuticle as visualized with CT scanning indicates progressive mineral resorption from the posterior to the anterior half of the body in premoult animals, its translocation from the anterior to posterior part during intramoult and its progressive deposition in the posterior and anterior exoskeleton during postmoult. Cuticle of sea slaters is a unique biocomposite and biodynamic material constantly reconstructed during frequent moults, and adapted to specific physical and biotic conditions of the high intertidal rocky zone.

Mud volcanoes are singular seafloor structures classified as ‘sensitive habitats’. Here we report on the sponge fauna from a field of eight mud volcanoes located in the Spanish margin of the northern Gulf of Cadiz (North-eastern Atlantic), at depths ranging from 380 to 1146 m. Thirty-eight beam-trawl samplings were conducted (covering over 61,000 m2) from 2010 to 2012, in the frame of a EC-LIFE + INDEMARES grant. A total of 1659 specimens were retrieved, belonging to 82 species, from which 79 were in the Class Demospongiae and three in Hexactinellida. Two species were new to science (Jaspis sinuoxea sp. nov.; Myrmekioderma indemaresi sp. nov.) and three others recorded for the first time in the Atlantic Ocean (Geodia anceps, Coelosphaera cryosi and Petrosia raphida). Five additional species were ‘Atlantic oddities’, since this study provides their second record in the Atlantic Ocean (Lanuginella cf. pupa, Geodia cf. spherastrella, Cladocroce spathiformis, Cladocroce fibrosa and Haliclona pedunculata). Basic numerical analyses indicated a significant linear relationship between the species richness per m2 and the number of sponge individuals per m2, meaning that in most volcanoes many species occur in equivalent, moderate abundance. Likewise, sponge species richness increased with depth, while the abundance of hard substrata resulting from carbonate precipitation and the fishing activities around the volcanoes had no detectable effect on the sponge fauna. However, in the latter case, a negative trend – lacking statistical support – underlaid the analyses, suggesting that a more extensive sampling would be necessary to derive more definitive conclusions in this regard.

Gnathiid isopods are one of the most common fish ectoparasites, and are found in both temperate and tropical oceans. On coral reefs, gnathiids are most active at dusk and dawn, and contribute significantly to trophic dynamics, as they are a prey resource for cleaner fish and parasitize numerous fishes. Gnathiids also inhabit temperate intertidal waters, but their activity patterns and contribution to intertidal trophic dynamics remain unstudied. To provide the first ecological data on temperate intertidal gnathiid activity patterns, 172 gnathiid-free Clinus superciliosus were set in an intertidal system in Tsitsikamma National Park, South Africa, during early morning, morning, afternoon, early evening, and evening, high and low tide, and within the inter- and infra-tidal zone to examine gnathiid infestation levels. After exposure, gnathiids from each fish were identified to the species level, counted, and their developmental stage was recorded. All gnathiids were identified as Gnathiia africana. On average, 1 ± 5SD gnathiids were collected from each fish, and the majority of gnathiids collected were stage 1. Significantly more gnathiids were collected during morning and afternoon compared with all other time periods. The number of gnathiids collected was not influenced by the fish's exposure to high or low tide, or placement within the tide zone. Although G. africana is free from cleaner fish predation because cleaner fish do not reside in temperate intertidal habitat, G. africana abundance is surprisingly small. Future studies should examine what regulates G. africana population size and the role they play in temperate intertidal food webs.

Large numbers of the leptomedusa Earleria bruuni were observed inside a semi-closed deep-sea caldera during a comparative survey of the macrozooplankton fauna inside and outside the Kurose Hole, Izu-Ogasawara Islands, by the remotely operated vehicle (ROV) ‘Dolphin-3K’, on 24 September 2000. The Kurose Hole is an inactive volcanic caldera of 790 m bottom depth, located within the Izu-Bonin island arc, south of Tokyo. Archived video and audio data from a dive by the human-occupied vehicle (HOV) ‘Shinkai 2000’, carried out 3 weeks after the ROV dives, was also analysed. During all dives within the caldera, E. bruuni was present in large numbers and, during the HOV dive, two specimens for morphological analysis were obtained. Herein, we report E. bruuni from the Pacific Ocean for the first time. The vertical profiles of environmental factors and the vertical distributions of gelatinous macrozooplankton taxa such as salps, ctenophores, hydromedusae, siphonophores and scyphomedusae, were extremely different inside and outside the caldera. Inside the caldera the water temperatures were warm and dissolved oxygen levels were high compared with outside. For each taxon, their distributions were characterized and compared between the inside and outside of the caldera, and with previous literature reports.

Relatively little is known about the distribution and diversity of marine mammals around offshore anthropogenic structures. We present results obtained from incidental sightings of marine mammals around oil and gas installations located 200 km off the Danish coast. A total of 131 sightings corresponding to about 288 animals were reported between May 2013 and May 2016. A total of seven marine mammal species were identified, five cetaceans: harbour porpoise (Phocoena phocoena), minke whale (Balaenoptera acutorostrata), white-beaked dolphin (Lagenorhynchus albirostris), killer whale (Orcinus orca), pilot whales (Globicephala spp.) and two species of pinnipeds: harbour (Phoca vitulina) and grey seals (Halichoerus grypus). The most sighted species were harbour porpoise (41%) and minke whale (31%). Relative counts and biodiversity of marine mammals observed around installations corresponded well with the expected distribution in the central North Sea. Several taxon-specific correlations were identified between number of sightings and environmental parameters (depth and latitude) or installation characteristics (installation aerial footprint). Furthermore, 85% of sightings were made during spring and summer and it is unclear whether the pattern observed reflected a natural seasonal occurrence of marine mammals in the area or an effect of reduced effort during autumn and winter. Despite the potential caveats, results obtained during this programme provide an insight into the relationship between marine mammals and oil and gas offshore installations in the North Sea.